FFCP PHASE1:Hg19::chr6:166076038..166076072,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10846 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8772 | |||
|TSSclassifier=weak | |||
|UniProt=Q9Y233,Q9ULW9 | |||
|association_with_transcript=-450bp_to_ENST00000366882,NM_001130690,NR_045597_5end | |||
|description=CAGE_peak_1_at_PDE10A_5end | |||
|id=chr6:166076038..166076072,- | |||
|ontology_enrichment_celltype=CL:0000222!5.35e-17!119;CL:0000213!1.31e-11!57;CL:0000215!1.31e-11!57;CL:0002139!6.89e-10!24;CL:0002494!6.67e-09!16;CL:0000071!8.58e-09!18;CL:0002546!8.58e-09!18;CL:0000115!2.41e-08!35;CL:0002078!3.25e-08!44;CL:0000183!4.19e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002494;1.15e-10;16!CL:0002139;4.74e-09;24!CL:0000071;1.06e-08;18!CL:0000213;4.64e-07;58!CL:0000215;4.64e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.31e-15,121;CL:0000213,2.43e-11,58;CL:0000215,2.43e-11,58;CL:0002494,1.59e-10,16;CL:0002139,2.75e-09,24;CL:0000071,6.00e-09,18;CL:0002546,6.00e-09,18;CL:0002078,4.43e-08,45;CL:0000115,5.08e-08,36 | |||
|ontology_enrichment_development_v019=CL:0002546;1.06e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!2.47e-26!194;UBERON:0000477!5.37e-25!286;UBERON:0004111!5.42e-22!241;UBERON:0004872!9.11e-22!84;UBERON:0003914!3.36e-21!118;UBERON:0001009!8.71e-20!113;UBERON:0004535!1.82e-18!110;UBERON:0002049!6.13e-18!79;UBERON:0007798!6.13e-18!79;UBERON:0000119!1.34e-17!312;UBERON:0000483!5.40e-17!309;UBERON:0003103!9.40e-16!69;UBERON:0000481!2.31e-15!347;UBERON:0000055!5.33e-15!69;UBERON:0001981!1.11e-14!60;UBERON:0007500!1.11e-14!60;UBERON:0004537!1.11e-14!60;UBERON:0006965!1.11e-14!60;UBERON:0007100!5.88e-13!27;UBERON:0000468!8.72e-13!659;UBERON:0000948!1.73e-11!24;UBERON:0005498!1.73e-11!24;UBERON:0004140!1.73e-11!24;UBERON:0009881!1.73e-11!24;UBERON:0004141!1.73e-11!24;UBERON:0003084!1.73e-11!24;UBERON:0007005!1.73e-11!24;UBERON:0004139!1.73e-11!24;UBERON:0004291!1.73e-11!24;UBERON:0000922!6.39e-11!612;UBERON:0000467!2.12e-10!625;UBERON:0000480!3.27e-10!626;UBERON:0002050!4.35e-10!605;UBERON:0005423!4.35e-10!605;UBERON:0000923!7.71e-10!604;UBERON:0005291!7.71e-10!604;UBERON:0006598!7.71e-10!604;UBERON:0002532!7.71e-10!604;UBERON:0007023!1.03e-09!115;UBERON:0001986!8.58e-09!18;UBERON:0004638!8.58e-09!18;UBERON:0004852!8.58e-09!18;UBERON:0000490!8.79e-09!138;UBERON:0000073!1.18e-08!94;UBERON:0001016!1.18e-08!94;UBERON:0005743!1.24e-08!86;UBERON:0001017!2.30e-08!82;UBERON:0000475!2.78e-08!365;UBERON:0000955!6.21e-08!69;UBERON:0006238!6.21e-08!69;UBERON:0002616!8.25e-08!59;UBERON:0001637!2.08e-07!42;UBERON:0003509!2.08e-07!42;UBERON:0004572!2.08e-07!42;UBERON:0002100!2.24e-07!216;UBERON:0003104!3.11e-07!238;UBERON:0009142!3.11e-07!238;UBERON:0000064!7.66e-07!219;UBERON:0003075!7.74e-07!86;UBERON:0007284!7.74e-07!86;UBERON:0000489!8.60e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;6.88e-15;25!UBERON:0000948;5.57e-13;22!UBERON:0004638;1.06e-08;18!UBERON:0001986;1.06e-08;18!UBERON:0004852;1.06e-08;18!UBERON:0003103;4.27e-08;61!UBERON:0007500;1.26e-07;56!UBERON:0001981;1.26e-07;56!UBERON:0004537;1.26e-07;56!UBERON:0001009;4.22e-07;112 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,7.52e-22,192;UBERON:0003914,2.06e-21,117;UBERON:0004872,2.17e-21,83;UBERON:0001009,6.71e-20,112;UBERON:0003103,1.32e-18,68;UBERON:0004535,2.16e-18,109;UBERON:0004111,6.18e-18,240;UBERON:0007100,1.79e-15,27;UBERON:0002049,2.49e-15,78;UBERON:0007798,2.49e-15,78;UBERON:0000119,3.51e-14,309;UBERON:0000948,1.11e-13,24;UBERON:0005498,1.11e-13,24;UBERON:0004140,1.11e-13,24;UBERON:0009881,1.11e-13,24;UBERON:0004141,1.11e-13,24;UBERON:0003084,1.11e-13,24;UBERON:0007005,1.11e-13,24;UBERON:0004139,1.11e-13,24;UBERON:0004291,1.11e-13,24;UBERON:0000483,1.42e-13,306;UBERON:0000055,2.69e-13,68;UBERON:0007500,3.37e-13,59;UBERON:0001981,3.37e-13,59;UBERON:0004537,3.37e-13,59;UBERON:0006965,3.37e-13,59;UBERON:0003104,5.07e-09,160;UBERON:0009142,5.07e-09,160;UBERON:0004638,6.00e-09,18;UBERON:0001986,6.00e-09,18;UBERON:0004852,6.00e-09,18;UBERON:0010314,1.39e-07,132;UBERON:0000922,2.43e-07,592;UBERON:0000489,6.77e-07,31 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.563817616383885,1.0007329835313,0.893922188854576,0.872338524100369,0,0,0.261185628199839,0.737201809504527,0.697801167972428,7.20856528029568,0,0.37129905888014,1.32558950291166,0.672325146451775,0,0,0.975865597581014,0.123121058076788,0.612002073732759,0.313454721478088,0.85870796139317,0.410623275218653,2.13422487311165,2.9801228241701,2.38091709404843,2.83358812729245,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6284119788377,7.37770945674,3.70801429346238,0.722878304769133,0,0.289693037921647,0,3.89307896242109,2.07976597760949,0.886917589850256,2.54720878510066,1.89919659471683,0,0,0,0,0,0,0,0,2.78267370313387,0.860234595106124,2.42998351125316,2.26123176769604,5.87299210693868,4.40188867104108,4.17989933073621,3.35941786920128,4.62496141492723,5.35552980423472,3.22263453687318,6.84244895146661,2.92874469057803,2.94130464276695,0.81014194788176,6.87607907787414,5.83776368828041,5.51796254368279,6.13266549863533,4.74632829784064,4.946447086121,0,0,0,2.98183171017191,0,4.8991396900891,3.72887606973458,4.965357350777,4.48542080113846,3.20246987189115,2.22000793575444,16.1829738407878,6.7355336034844,6.37501422142489,5.14615253992767,7.49028701823999,0,0,0.570471821544449,0,0.117434498643765,0.161872944368132,0,0,0,0,0,0.741800787835671,0,2.15585442544872,0.673344455816265,0.875829639103749,0,0,0,0.300476117813194,3.17610112848059,0.717558542755448,0.85422955527427,0.211931901159562,0,0,0,0,0,0,0,0.0920498986422993,0,0.710019185033229,0.10075209822764,0,0,0,0,0.121973706129595,0.265059536642971,0.348581828608555,0.621966330092223,1.26160425437814,0.36497735907583,0,0,1.38134921352481,0,0,0.118306800039844,0.337169380156203,0.241011029883482,0.110293972732394,0.217879444092406,0.71181185733329,0.134831308160164,0.196221465125346,0.38474715694639,3.69077727312324,7.01208869017229,2.057870056657,1.47008711385542,0,0.982827216677626,1.77236972004421,0,0,0.857839051492628,0,0,0,0,0.325808305310325,0,1.44331342025273,0.231860809950154,2.7003999674239,1.58803092537181,0.462985512576611,0.761016608938393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,2.69114602428866,1.30788020649984,1.7601188597028,2.71470603091333,0,0,2.6593811658487,0,0.257207374262142,0,0,3.14551586047925,5.96883765930587,0.823240336780769,0,4.6200953336531,0,3.01439377059586,0.871533458600294,4.39881161201051,0,0,0,3.35474797688216,1.14861935834114,4.27910715122155,1.30303176000821,0.410952645100767,2.68591444859843,0,0,0,0,2.03275699377971,1.30139853857622,0.773288812777695,0.335032530668698,0,0,0,0,1.2269149171914,0.500170521059677,2.71265023699736,0,0,0,0,1.50473049863859,0,1.03473071292505,2.65690239414175,1.65932251687533,0,1.95801157462741,3.43143423810856,0,0,0,1.81876542867756,1.66435439510497,0.604780586659361,1.48864684691266,0.61384789315225,0.841980283299221,0.640695746278505,1.02341449813341,0.482561763430822,0,0.154209693802656,0.177561725313127,0,4.15403543346897,0.116210378459959,0.362578348774867,0,0,0,0,0,4.06079651616671,2.84956747286335,5.49044838423799,2.92278449306521,2.00548094896464,2.27466768141793,1.53084334748864,3.02282282542995,1.54227252690289,3.52230368807009,4.01351819083883,2.54876273045038,0.831076008928724,2.23874754722178,0,0,1.53870075069834,0.656029291399411,0.976135183992909,1.13345112812495,0,0,0,0,0,1.16004861950546,1.69453478826109,1.07452572308291,1.24052915236078,0.429680979473094,1.0151168573996,2.04543905798642,0.890320356467374,0,0,0.127612712494584,0,1.85938219718914,3.46293581513704,2.7881490806424,3.08033580176089,0,1.73986598415015,0.55597265731176,3.43499728180779,3.34942532423701,4.74569137078089,9.34087950226742,0,0,3.5002357271853,5.49464048139461,1.07923474549989,5.4907405947211,4.12343408209902,1.41527737101321,9.5106192703805,4.21258456238981,0,0.974853958525138,0,0,0.141405431953713,2.26016233240486,3.30819206127675,1.32687795048244,1.31535265576129,0,0,0.811641507850816,0.6196469961995,1.69017361519345,1.72093622644862,2.65272410735427,0.7133421029625,0,0,0,0.379473173765715,0,0,0,1.08890984861323,1.60044461320525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0.318852545457645,0,0,0,0,0,0,0,0,1.69291777801603,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,3.95572084034114,0,0,0,5.01363417949149,3.8605408508243,4.91457123358771,0,2.67271891179974,4.22973079087042,0,0,3.38721580026819,2.48655523978033,0,0,0.492339221844278,0,0,8.59301638442924,0,4.83352687620975,0,2.22273980289274,0.969332746095218,1.39152147242777,1.99613798001194,0.520855522170466,0.0874599999961957,4.34999745260876,0.341380344856499,0,1.18193840883968,0,0,0,0.885741385813839,2.05013945663194,0,0.774054819518572,1.47773809476774,0.438770794307945,2.06983080686081,0,2.30850775511391,3.98797195464504,0,0,0.434589487688032,2.23300811812344,1.28236630762607,2.13213910407454,0,0,0,0,0,0,0,0,6.54094000036884,2.12202650606892,0.282706142867882,0,0.995261931078505,1.41532103205343,3.05515072466813,1.18608451472249,2.47127877893006,1.56632924258183,1.48282492557489,7.2231988256891,3.04543779442941,0,0.19566461893209,0,5.12959723704208,1.20990716048664,1.83643656978294,0.884612114798832,0.751617097072463,2.28114021073944,4.6525771089503,1.323967823502,4.08112793929393,4.77889719091835,0,0.138674673013139,0,0,0,4.36816670605075,0,0.774050650312681,1.60796497589608,1.31384731285135,1.35784623083787,0,2.71176888936639,4.65942543798953,6.95501140960464,0.949661939338181,0,0.160317640503067,2.77488893161158,0.999048047910651,0.288180834308212,0,0,1.1524383839052,0,0.471388069233591,5.43616824294456,5.02093662299199,0.509991088181609,0.577901179803038,2.40168115483916,6.70836356570766,0,0,0.262887354279314,1.39641200636127,2.06244381610515,7.17873024576814,4.19325901047881,6.00916467391199,3.12440040418622,10.4134382354426,11.5295962733569,0,0,0,0,0.295282444544246,0,1.59045937961861,2.99647493445466,0.482259445395058,0.550157746388935,0.83088067605837,0,0,1.15424157650247,0,3.30983970656632,4.98318587282482,0.105600336519406,2.33073541132698,0,2.85878130549347,1.98627591109629,0,0,0.864221491201268,0,0,0,5.45241669713349,0,0.58620893471233,0,1.29282956361551,2.6446520348538,3.25064991980226,0,2.13574825135389,1.72924735609633,6.62782488555513,1.9846640872478,0,0,0,0,1.2534494701135,0.306345576763462,0.327872630709804,0,0,0.488105059607853,1.752673029891,0.573409195690071,1.77486482458964,1.55241007353459,0,2.37462775128003,0,1.14186133417987,5.17584803335978,0,0,0.149254802886874,0.701139929541673,0,0.189403005275089,0.251567901752575,0.889811221596536,2.51724075236616,3.62954217031774,2.48699520932449,3.10495814978231,2.07085797312813,0.899606224327209,2.17368139626763,0.829412415681711,1.86089200190596,1.04349012362347,1.80309130796662,1.14241563650639,1.62748293281865,1.81848659202559,3.32972726831714,2.32016879939247,0.796191777397232,4.80033317595784,0,0,3.78554694685953,3.85239660814607,3.43106546199881,3.91491437947817,6.80117776536817,8.79785402430569,5.13947079463582,2.68633261622231,1.23520578864389,3.94711289241673,2.29695889729645,3.47245268887647,5.23721566024525,0.76872455576384,0.690860683462397,0,1.52084279766904,0,0.132864840313363,0.163565394255844,0.327609848846413,13.2717370727008,0,0,0,0,9.08025525706937,0.184105950251841,0,0,1.15104934173287,4.85211651285068,0,7.53546503524896,0,0,0.123935764259002,0,11.1301522728697,0,1.60114149657094,1.76337971845342,4.593682160298,1.92687675289379,0,3.03304332208587,0.82046545696302,5.79764901309952,0.484100767249525,1.93770774758221,1.42769420259154,0,5.78051644403928,0,0,6.10211352747467,6.90359926060101,4.77398933079059,4.28698871590766,2.42046082444224,0.781514011233092,0,2.12903492763126,0,0.945526184657525,0,1.44680757550829,0.760989722326882,7.11067251723685,0.548257766857182,3.47347824872506,0,0,3.21421101526972,1.3451348888753,1.21393120847326,1.13831095675649,1.95145214357805,0,0.171488009437418,1.42736439251347,0.657727735628491,0,0.556157009460346,2.19780659981439,1.09980912941201,0,4.56579360254748,8.63710364874486,34.8758732157547,1.1436247068265,0,0,6.08503953059028,1.60342272946051,0.207216164163037,0,0,0.430227358820278,0,0,3.81048345171836,2.2910686854405,1.5510319283216,1.91107787795487,0,0,0,0,0.410651227424988,3.4794432940146,2.91426595835484,0,0,0.356760272332706,0.33883824611688,0,0,0.540219106755613,1.5299169235277,0,0,1.41405928260976,0.981542335574726,2.37637120261669,3.3812458206672,2.20905249094162,2.53756578545605,4.70542582207113,0,3.39252483350749,0.352894871715692,0.240724100067505,17.5280733179164,1.83491713361816,4.58686666084644,2.68211655728414,0.543931921527318,1.74540276136151,4.2322147241232,0.743990036333503,0.924351257262837,0,0,0.218531143927391,0,0.101988829741982,0,0.275684698604535,0.250707539292375,1.66713136080127,0.267964130156178,1.65833887891756,2.79269088827117,1.0661699095049,5.95161078659351,0.193766729508018,1.67601728598816,6.27938430451435,2.60953348940476,8.08468755832877,2.17716747896961,4.79126621519393,0.875576689189638,1.72133292942423,6.65320713092027,0.325613074443898,0.106727345877715,1.9307228228694,0,2.34640942403454,3.30051899293739,2.84827324821017,1.99727032255654,2.41528552309231,0 | |||
|short_description=p1@PDE10A | |||
}} |
Revision as of 15:08, 22 January 2014
Short description: | p1@PDE10A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PDE10A_5end |
Coexpression cluster: | NA |
Association with transcript: | -450bp_to_ENST00000366882, NM_001130690, NR_045597_5end |
EntrezGene: | PDE10A |
HGNC: | 8772 |
UniProt: | Q9Y233Q9ULW9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.31e-15 | 121 |
lining cell | 2.43e-11 | 58 |
barrier cell | 2.43e-11 | 58 |
cardiocyte | 1.59e-10 | 16 |
endothelial cell of vascular tree | 2.75e-09 | 24 |
blood vessel endothelial cell | 6.00e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.00e-09 | 18 |
meso-epithelial cell | 4.43e-08 | 45 |
endothelial cell | 5.08e-08 | 36 |