FFCP PHASE1:Hg19::chr6:155427753..155427772,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:155427753..155427772,+ | |||
|id=chr6:155427753..155427772,+ | |||
|ontology_enrichment_celltype=CL:0000153!1.41e-18!9;CL:0000447!1.41e-18!9;CL:0000667!6.95e-15!6;CL:0000058!6.95e-15!6;CL:0000138!6.95e-15!6;CL:0000062!1.08e-14!11;CL:0000375!1.08e-14!11;CL:0000335!1.08e-14!11;CL:0000055!1.32e-14!180;CL:0000327!1.55e-11!14;CL:0000035!1.07e-09!20;CL:0000499!6.07e-09!27;CL:0000057!1.86e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000062;1.92e-25;9!CL:0000138;1.85e-17;6!CL:0000054;1.29e-13;2!CL:0000137;1.29e-13;2!CL:0000092;1.29e-13;2!CL:0000153;5.52e-12;9!CL:0000447;5.52e-12;9!CL:0002092;8.06e-11;10!CL:0000327;1.44e-07;15!CL:0000151;2.64e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,2.83e-36,11;CL:0000375,2.83e-36,11;CL:0000335,2.83e-36,11;CL:0000058,1.85e-17,6;CL:0000138,1.85e-17,6;CL:0000054,1.07e-13,2;CL:0000137,1.07e-13,2;CL:0000092,1.07e-13,2;CL:0000153,5.52e-12,9;CL:0000447,5.52e-12,9;CL:0002092,7.67e-11,10;CL:0000327,1.44e-07,15;CL:0000151,7.52e-07,36 | |||
|ontology_enrichment_development_v019=CL:0000335;2.96e-36;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:200;1.29e-13;2!DOID:4305;1.29e-13;2 | |||
|ontology_enrichment_disease_v019_2=DOID:200,1.07e-13,2;DOID:4305,1.07e-13,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001474;1.43e-34;18!UBERON:0007195;2.16e-26;1!UBERON:0004765;4.51e-24;26!UBERON:0002371;3.09e-19;12!UBERON:0001434;5.07e-16;36!UBERON:0002405;6.06e-09;27!UBERON:0002390;1.01e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,2.16e-26,1;UBERON:0001474,9.98e-08,82;UBERON:0004765,4.64e-07,90 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,2.00535164254356,0.579386075843295,0.795285947051099,1.45990461090791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741800787835671,0,0,0,0.125118519871964,0,0,0.612975591598039,0.150238058906597,0,0,0.85422955527427,0.211931901159562,0,0,0.257640540045629,0.744467425326359,0,0,0.252433774244115,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41849132023278,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0,0,0.300946099727719,0,1.03473071292505,0,0.368738337083406,0,0,0,0,0,0,0,0,0,0.248107807818777,0.767309866440312,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.83865340936865,4.86806049531469,0,0,0,0.096670718292122,0,0,0,0,0.145016693914229,0,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0.633322905892992,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.66821940867821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784901281975124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39961921916426,0,0,0,0,0,0,0,0.209205692624666,0.101998217636322,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568209015825267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0,0.353378291891762,0,0,0,0,0,0,0.584580926518165,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90691047733584,0,0.198916222116275,0,0.60511520611056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0.462175628631418,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:155427753..155427772,+ | |||
}} |
Revision as of 14:44, 22 January 2014
Short description: | p@chr6:155427753..155427772, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:155427753..155427772, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 2.83e-36 | 11 |
osteoprogenitor cell | 2.83e-36 | 11 |
mesenchyme condensation cell | 2.83e-36 | 11 |
chondroblast | 1.85e-17 | 6 |
chondrocyte | 1.85e-17 | 6 |
bone matrix secreting cell | 1.07e-13 | 2 |
osteocyte | 1.07e-13 | 2 |
osteoclast | 1.07e-13 | 2 |
GAG secreting cell | 5.52e-12 | 9 |
carbohydrate secreting cell | 5.52e-12 | 9 |
bone marrow cell | 7.67e-11 | 10 |
extracellular matrix secreting cell | 1.44e-07 | 15 |
secretory cell | 7.52e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 2.16e-26 | 1 |
bone element | 9.98e-08 | 82 |
skeletal element | 4.64e-07 | 90 |
Ontology term | p-value | n |
---|---|---|
giant cell tumor | 1.07e-13 | 2 |
bone giant cell tumor | 1.07e-13 | 2 |