FFCP PHASE1:Hg19::chr6:105384868..105384889,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C83 | |||
|description=CAGE_peak_at_chr6:105384868..105384889,+ | |||
|id=chr6:105384868..105384889,+ | |||
|ontology_enrichment_celltype=CL:0000039!1.37e-40!7;CL:0000586!1.37e-40!7;CL:0002541!4.58e-24!3 | |||
|ontology_enrichment_celltype_v019=CL:0000039;6.36e-52;7!CL:0000586;6.36e-52;7!CL:0002541;1.66e-30;3!CL:0000349;1.46e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,6.36e-52,7;CL:0000586,6.36e-52,7;CL:0002541,1.66e-30,3;CL:0000349,1.46e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.68e-11;1!UBERON:0009117;9.85e-10;10!UBERON:0005564;9.85e-10;10 | |||
|ontology_enrichment_disease=DOID:3095!5.60e-17!22;DOID:2994!5.60e-17!22;DOID:1799!1.60e-09!1;DOID:10165!1.60e-09!1;DOID:1798!1.60e-09!1;DOID:4960!6.72e-09!1;DOID:0070004!6.72e-09!1;DOID:0060085!1.07e-08!1;DOID:3165!1.07e-08!1;DOID:0060121!1.07e-08!1;DOID:2438!1.07e-08!1;DOID:4418!1.07e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:3095;5.50e-22;22!DOID:2994;5.50e-22;22!DOID:1799;8.62e-12;1!DOID:10165;8.62e-12;1!DOID:1798;8.62e-12;1!DOID:4960;5.16e-11;1!DOID:0070004;5.16e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,5.41e-22,22;DOID:2994,5.41e-22,22;DOID:1799,8.62e-12,1;DOID:10165,8.62e-12,1;DOID:1798,8.62e-12,1;DOID:4960,5.43e-11,1;DOID:0070004,5.43e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0000473!4.46e-24!8;UBERON:0000476!4.58e-24!3;UBERON:0000920!4.58e-24!3;UBERON:0003124!4.38e-18!7;UBERON:0003135!1.73e-17!11;UBERON:0005631!1.03e-13!14;UBERON:0000158!1.03e-13!14;UBERON:0000991!4.38e-09!21;UBERON:0009196!4.38e-09!21;UBERON:0009117!4.38e-09!21;UBERON:0005564!4.38e-09!21;UBERON:0001282!4.91e-09!1;UBERON:0009842!4.91e-09!1;UBERON:0003704!4.91e-09!1;UBERON:0001171!4.91e-09!1;UBERON:0001172!4.91e-09!1;UBERON:0007190!1.16e-08!1;UBERON:0004176!1.16e-08!22;UBERON:0003101!1.16e-08!22;UBERON:0000079!1.16e-08!22;UBERON:0000478!6.35e-08!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.66e-30;3!UBERON:0000920;1.66e-30;3!UBERON:0005631;4.50e-16;10!UBERON:0000158;4.50e-16;10!UBERON:0000473;4.93e-12;8!UBERON:0001282;3.63e-11;1!UBERON:0009842;3.63e-11;1!UBERON:0003704;3.63e-11;1!UBERON:0001171;3.63e-11;1!UBERON:0001172;3.63e-11;1!UBERON:0000478;3.16e-10;24!UBERON:0003135;6.80e-09;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.66e-30,3;UBERON:0003124,5.02e-23,7;UBERON:0005631,1.38e-17,14;UBERON:0000158,1.38e-17,14;UBERON:0000473,4.93e-12,8;UBERON:0001282,3.63e-11,1;UBERON:0009842,3.63e-11,1;UBERON:0003704,3.63e-11,1;UBERON:0001171,3.63e-11,1;UBERON:0001172,3.63e-11,1;UBERON:0000478,3.16e-10,24;UBERON:0003135,6.80e-09,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40035338437484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91845782408015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1360521749513,7.91248028370096,0,1.67121139316383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.81104484819706,34.8151495625971,48.1100974036379,16.1884584163792,11.803042910081,3.84709892287822,17.5901476086149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.70685364401983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06657975592979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,55.786125924543,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,9.57985597756499,0,0,0,0,0,0,0,0,0,0,0.647782773655864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9096590950751,22.233564883752,0,10.2922287479026,23.3158011541909,0.833565680400634,0.535928260312357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:105384868..105384889,+ | |||
}} |
Revision as of 13:09, 22 January 2014
Short description: | p@chr6:105384868..105384889, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:105384868..105384889, + |
Coexpression cluster: | C83_choriocarcinoma_pancreatic_placenta_chorionic_HES3GFP_testicular_amniotic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 6.36e-52 | 7 |
germ cell | 6.36e-52 | 7 |
chorionic membrane mesenchymal stem cell | 1.66e-30 | 3 |
extraembryonic cell | 1.46e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.66e-30 | 3 |
chorion | 5.02e-23 | 7 |
extraembryonic membrane | 1.38e-17 | 14 |
membranous layer | 1.38e-17 | 14 |
testis | 4.93e-12 | 8 |
intralobular bile duct | 3.63e-11 | 1 |
acinus | 3.63e-11 | 1 |
intrahepatic bile duct | 3.63e-11 | 1 |
portal lobule | 3.63e-11 | 1 |
hepatic acinus | 3.63e-11 | 1 |
extraembryonic structure | 3.16e-10 | 24 |
male reproductive organ | 6.80e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 5.41e-22 | 22 |
germ cell cancer | 5.41e-22 | 22 |
islet cell tumor | 8.62e-12 | 1 |
endocrine pancreas cancer | 8.62e-12 | 1 |
pancreatic endocrine carcinoma | 8.62e-12 | 1 |
bone marrow cancer | 5.43e-11 | 1 |
myeloma | 5.43e-11 | 1 |