FFCP PHASE1:Hg19::chr6:32806002..32806046,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6891 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=44 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc003occ.2_5end | |||
|description=CAGE_peak_2_at_TAP2_5end | |||
|id=chr6:32806002..32806046,- | |||
|ontology_enrichment_celltype=CL:0000066!3.81e-17!254;CL:0000548!8.63e-13!679;CL:0000004!8.63e-13!679;CL:0000255!8.63e-13!679;CL:0000012!1.17e-12!682;CL:0000063!4.52e-10!578;CL:0002076!1.68e-08!43;CL:0000076!7.71e-08!62;CL:0002368!1.55e-07!13;CL:0000003!2.59e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0002368;9.96e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.72e-17,253;CL:0002076,2.25e-08,42;CL:0000076,4.91e-08,63;CL:0002368,1.12e-07,13 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.08e-13!235;DOID:14566!1.23e-13!239;DOID:2531!2.07e-10!51;DOID:0060083!2.07e-10!51;DOID:1240!3.28e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:2531;6.23e-07;51!DOID:0060083;6.23e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.84e-14,235;DOID:14566,3.56e-14,239;DOID:2531,9.47e-11,51;DOID:0060083,9.47e-11,51;DOID:1240,1.83e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.06e-08!95;UBERON:0004119!2.53e-08!169;UBERON:0000925!2.53e-08!169;UBERON:0006595!2.53e-08!169;UBERON:0001004!4.14e-08!72;UBERON:0000065!2.48e-07!53;UBERON:0000072!6.30e-07!46 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,9.61e-10,99;UBERON:0001004,3.89e-08,74;UBERON:0004119,3.96e-08,160;UBERON:0000925,3.96e-08,160;UBERON:0006595,3.96e-08,160;UBERON:0000065,1.89e-07,54;UBERON:0000072,3.76e-07,47 | |||
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| |||
|short_description=p2@TAP2 | |||
}} |
Revision as of 11:17, 22 January 2014
Short description: | p2@TAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TAP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc003occ.2_5end |
EntrezGene: | TAP2 |
HGNC: | 44 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.72e-17 | 253 |
endo-epithelial cell | 2.25e-08 | 42 |
squamous epithelial cell | 4.91e-08 | 63 |
respiratory epithelial cell | 1.12e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
surface structure | 9.61e-10 | 99 |
respiratory system | 3.89e-08 | 74 |
endoderm-derived structure | 3.96e-08 | 160 |
endoderm | 3.96e-08 | 160 |
presumptive endoderm | 3.96e-08 | 160 |
respiratory tract | 1.89e-07 | 54 |
segment of respiratory tract | 3.76e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.84e-14 | 235 |
disease of cellular proliferation | 3.56e-14 | 239 |
hematologic cancer | 9.47e-11 | 51 |
immune system cancer | 9.47e-11 | 51 |
leukemia | 1.83e-07 | 39 |