FFCP PHASE1:Hg19::chr5:160365601..160365625,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=285629 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=7bp_to_ENST00000518301,ENST00000518580,NR_027111,uc003lyq.1_5end | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_1_at_LOC285629_5end | |||
|id=chr5:160365601..160365625,- | |||
|ontology_enrichment_celltype=CL:0005020!4.70e-18!6;CL:0002138!4.70e-18!6;CL:0005022!4.70e-18!6;CL:0000066!3.10e-13!254;CL:0002586!2.05e-10!3;CL:0000622!6.06e-10!5;CL:0002623!1.28e-09!3;CL:0002139!8.91e-09!24;CL:0000154!2.79e-08!6;CL:0002159!4.53e-08!13;CL:0000149!6.88e-08!4;CL:0000575!1.87e-07!2;CL:0002077!3.16e-07!33 | |||
|ontology_enrichment_celltype_v019=CL:0002586;2.17e-29;3!CL:0000149;3.22e-22;4!CL:0000575;1.05e-19;2!CL:0002159;1.25e-16;14!CL:0002138;7.74e-15;6!CL:0002144;3.64e-14;3!CL:0000319;4.14e-11;1!CL:0002139;6.08e-10;24!CL:0002077;1.88e-08;34!CL:0000622;1.93e-08;5!CL:0000154;3.57e-07;6!CL:0000147;9.98e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,2.91e-29,3;CL:0000149,4.01e-22,4;CL:0000575,5.40e-20,2;CL:0002159,9.90e-17,14;CL:0005020,8.52e-15,6;CL:0002138,8.52e-15,6;CL:0005022,8.52e-15,6;CL:0002144,3.64e-14,3;CL:0000319,4.58e-11,1;CL:0002139,6.33e-10,24;CL:0002077,1.45e-09,34;CL:0000066,2.01e-09,253;CL:0000622,2.08e-08,5;CL:0000154,3.80e-07,6 | |||
|ontology_enrichment_development_v019=CL:0005022;7.74e-15;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;4.14e-11;1!DOID:3151;9.96e-11;1!DOID:3149;9.96e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,4.58e-11,1;DOID:3151,1.10e-10,1;DOID:3149,1.10e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0000020!4.87e-19!23;UBERON:0000970!6.51e-19!20;UBERON:0001032!4.12e-18!24;UBERON:0004456!4.12e-18!24;UBERON:0002104!7.11e-18!21;UBERON:0000019!6.80e-17!19;UBERON:0000047!6.80e-17!19;UBERON:0004088!6.80e-17!19;UBERON:0003072!6.80e-17!19;UBERON:0003071!6.80e-17!19;UBERON:0004128!6.80e-17!19;UBERON:0007625!8.07e-16!11;UBERON:0001456!4.82e-15!21;UBERON:0002465!4.73e-14!10;UBERON:0001473!2.40e-13!8;UBERON:0004536!2.40e-13!8;UBERON:0006558!2.40e-13!8;UBERON:0005085!2.58e-12!29;UBERON:0001444!5.67e-12!48;UBERON:0000966!9.79e-11!5;UBERON:0005388!9.79e-11!5;UBERON:0001802!9.79e-11!5;UBERON:0001781!2.05e-10!3;UBERON:0001782!2.05e-10!3;UBERON:0005424!2.05e-10!3;UBERON:0001801!3.73e-09!14;UBERON:0000063!4.56e-08!97;UBERON:0003408!2.56e-07!10;UBERON:0000488!5.82e-07!4;UBERON:0000153!9.58e-07!129;UBERON:0007811!9.58e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;3.32e-31;5!UBERON:0005388;3.32e-31;5!UBERON:0001802;3.32e-31;5!UBERON:0001781;2.17e-29;3!UBERON:0001782;2.17e-29;3!UBERON:0000019;9.71e-18;19!UBERON:0000047;9.71e-18;19!UBERON:0004088;9.71e-18;19!UBERON:0010230;9.71e-18;19!UBERON:0000970;7.81e-17;20!UBERON:0002104;5.16e-16;21!UBERON:0001456;5.16e-16;21!UBERON:0000020;1.38e-14;23!UBERON:0010523;3.64e-14;3!UBERON:0001915;3.64e-14;3!UBERON:0001982;3.64e-14;3!UBERON:0001032;5.79e-14;24!UBERON:0004456;5.79e-14;24!UBERON:0001473;2.85e-11;8!UBERON:0004536;2.85e-11;8!UBERON:0006558;2.85e-11;8!UBERON:0000964;2.48e-10;4!UBERON:0010409;2.48e-10;4!UBERON:0002465;4.03e-09;10!UBERON:0000033;1.17e-08;50!UBERON:0007625;1.95e-08;11!UBERON:0010371;2.62e-07;31!UBERON:0001444;7.02e-07;48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,2.91e-29,3;UBERON:0005424,2.91e-29,3;UBERON:0000966,5.58e-26,6;UBERON:0005388,5.58e-26,6;UBERON:0001802,5.58e-26,6;UBERON:0001781,4.01e-22,4;UBERON:0000019,6.99e-17,20;UBERON:0000047,6.99e-17,20;UBERON:0010312,6.99e-17,20;UBERON:0004088,6.99e-17,20;UBERON:0010230,6.99e-17,20;UBERON:0003072,6.99e-17,20;UBERON:0004128,6.99e-17,20;UBERON:0003071,6.99e-17,20;UBERON:0000970,4.64e-16,21;UBERON:0002104,4.64e-16,21;UBERON:0001456,2.60e-15,22;UBERON:0005085,2.09e-14,31;UBERON:0010523,3.64e-14,3;UBERON:0001915,3.64e-14,3;UBERON:0001982,3.64e-14,3;UBERON:0000020,5.29e-14,24;UBERON:0001032,5.29e-14,24;UBERON:0004456,5.29e-14,24;UBERON:0001473,3.07e-11,8;UBERON:0004536,3.07e-11,8;UBERON:0006558,3.07e-11,8;UBERON:0000153,3.29e-11,62;UBERON:0007811,3.29e-11,62;UBERON:0000964,1.78e-10,4;UBERON:0010409,1.78e-10,4;UBERON:0004348,1.78e-10,4;UBERON:0005427,1.78e-10,4;UBERON:0000033,5.90e-10,56;UBERON:0002465,4.26e-09,10;UBERON:0001444,7.29e-09,49;UBERON:0007625,2.11e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0,0.175669571386252,0,1.82147644146271,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,2.13459757612026,1.00416183829401,11.6820501961653,0,9.76248230192678,0.367663080345869,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,1.09750285408626,0,0,0,0,0,0,0.115930404975077,0.117408694235822,1.87676382089396,0.462985512576611,0.951270761172991,0,0,0,0,0,1.87467667973554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02580050046556,2.29610251989794,2.92840555197873,0.103041011647722,0,0,1.14853107599234,0,0,0,0,0,0,0,0,0,0,0,0,0.765676274967505,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,2.86433879480975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0.160317640503067,0.213452994739353,0,0,0,0,0,0,1.41416420770077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,1.34173875039706,0.157611414598396,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0.138348634936231,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21195617878347,0,0,0,0,0,0,1.39879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,156.676584835231,0,0,0,0,0.207216164163037,0.85359238546975,1.38251932362818,0,0,0,0,0.68732060563215,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0334225573761,0.682821857254437,0,0,0,0.870866991587845,0,0.404112318087525,0.143444410785353,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@LOC285629 | |||
}} |
Revision as of 08:47, 22 January 2014
Short description: | p1@LOC285629 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC285629_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | 7bp_to_ENST00000518301, ENST00000518580, NR_027111, uc003lyq.1_5end |
EntrezGene: | LOC285629 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 2.91e-29 | 3 |
visual pigment cell | 4.01e-22 | 4 |
corneal epithelial cell | 5.40e-20 | 2 |
general ecto-epithelial cell | 9.90e-17 | 14 |
lymphangioblast | 8.52e-15 | 6 |
endothelial cell of lymphatic vessel | 8.52e-15 | 6 |
vascular lymphangioblast | 8.52e-15 | 6 |
capillary endothelial cell | 3.64e-14 | 3 |
mucus secreting cell | 4.58e-11 | 1 |
endothelial cell of vascular tree | 6.33e-10 | 24 |
ecto-epithelial cell | 1.45e-09 | 34 |
epithelial cell | 2.01e-09 | 253 |
acinar cell | 2.08e-08 | 5 |
protein secreting cell | 3.80e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 4.58e-11 | 1 |
skin squamous cell carcinoma | 1.10e-10 | 1 |
keratoacanthoma | 1.10e-10 | 1 |