FFCP PHASE1:Hg19::chr5:125759213..125759224,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=65983 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24911 | |||
|TSSclassifier=strong | |||
|UniProt=D6RFH3,D6R9P9 | |||
|association_with_transcript=49bp_to_ENST00000505720,ENST00000513978,ENST00000514099_5end | |||
|coexpression_cluster_id=C1274 | |||
|description=CAGE_peak_5_at_GRAMD3_5end | |||
|id=chr5:125759213..125759224,+ | |||
|ontology_enrichment_celltype=CL:0000057!3.07e-10!75;CL:0000055!2.71e-07!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.55e-10,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.79e-16!115;UBERON:0000475!5.03e-16!365;UBERON:0002616!3.12e-15!59;UBERON:0001049!3.24e-15!57;UBERON:0005068!3.24e-15!57;UBERON:0006241!3.24e-15!57;UBERON:0007135!3.24e-15!57;UBERON:0004121!1.56e-13!169;UBERON:0000033!2.95e-13!123;UBERON:0000062!4.41e-13!511;UBERON:0000153!7.68e-13!129;UBERON:0007811!7.68e-13!129;UBERON:0000924!7.98e-13!173;UBERON:0006601!7.98e-13!173;UBERON:0000955!1.73e-12!69;UBERON:0006238!1.73e-12!69;UBERON:0000468!8.27e-12!659;UBERON:0003080!1.46e-11!42;UBERON:0001017!1.80e-11!82;UBERON:0000467!2.54e-11!625;UBERON:0005743!2.63e-11!86;UBERON:0002780!3.31e-11!41;UBERON:0001890!3.31e-11!41;UBERON:0006240!3.31e-11!41;UBERON:0000480!3.95e-11!626;UBERON:0003075!1.56e-10!86;UBERON:0007284!1.56e-10!86;UBERON:0000073!1.21e-09!94;UBERON:0001016!1.21e-09!94;UBERON:0002346!1.28e-09!90;UBERON:0001893!1.35e-09!34;UBERON:0000477!1.48e-09!286;UBERON:0002020!1.62e-09!34;UBERON:0003528!1.62e-09!34;UBERON:0002791!4.18e-09!33;UBERON:0001869!1.15e-08!32;UBERON:0000064!1.31e-08!219;UBERON:0002619!2.24e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;4.55e-13;34!UBERON:0003528;3.55e-12;34!UBERON:0002020;3.55e-12;34!UBERON:0002780;5.66e-12;41!UBERON:0001890;5.66e-12;41!UBERON:0001869;6.92e-12;32!UBERON:0002791;9.22e-12;32!UBERON:0000073;2.50e-11;53!UBERON:0002616;2.50e-11;53!UBERON:0002619;6.30e-10;22!UBERON:0001950;1.08e-09;20!UBERON:0002420;1.85e-09;9!UBERON:0007245;1.85e-09;9!UBERON:0010009;1.85e-09;9!UBERON:0010011;1.85e-09;9!UBERON:0000454;1.85e-09;9!UBERON:0000125;3.70e-09;9!UBERON:0002308;3.70e-09;9!UBERON:0003688;8.48e-09;6!UBERON:0002358;8.48e-09;6!UBERON:0003684;8.48e-09;6!UBERON:0001178;8.48e-09;6!UBERON:0004457;2.38e-08;9!UBERON:0000042;2.38e-08;9!UBERON:0000956;3.34e-08;25!UBERON:0000203;3.34e-08;25!UBERON:0001017;1.34e-07;75!UBERON:0005631;1.53e-07;10!UBERON:0000158;1.53e-07;10!UBERON:0009663;1.78e-07;7!UBERON:0000305;2.81e-07;7!UBERON:0000955;5.64e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.15e-22,56;UBERON:0005068,2.15e-22,56;UBERON:0006241,2.15e-22,56;UBERON:0007135,2.15e-22,56;UBERON:0000073,7.10e-20,53;UBERON:0002616,7.10e-20,53;UBERON:0002780,1.22e-16,41;UBERON:0001890,1.22e-16,41;UBERON:0003080,1.22e-16,41;UBERON:0006240,1.22e-16,41;UBERON:0001017,1.54e-16,81;UBERON:0000955,2.83e-16,68;UBERON:0006238,2.83e-16,68;UBERON:0007023,7.51e-16,114;UBERON:0001893,4.05e-15,34;UBERON:0003528,5.52e-15,34;UBERON:0002020,5.52e-15,34;UBERON:0004121,7.17e-15,171;UBERON:0000924,7.17e-15,171;UBERON:0006601,7.17e-15,171;UBERON:0010314,1.10e-14,132;UBERON:0001016,1.88e-14,89;UBERON:0003075,2.55e-14,82;UBERON:0007284,2.55e-14,82;UBERON:0010371,4.60e-14,104;UBERON:0001869,1.44e-13,32;UBERON:0002791,2.01e-13,32;UBERON:0002346,5.02e-13,86;UBERON:0002619,4.13e-10,22;UBERON:0001950,7.02e-10,20;UBERON:0003056,8.55e-10,61;UBERON:0002420,1.60e-09,9;UBERON:0007245,1.60e-09,9;UBERON:0010009,1.60e-09,9;UBERON:0010011,1.60e-09,9;UBERON:0000454,1.60e-09,9;UBERON:0000125,3.07e-09,9;UBERON:0002308,3.07e-09,9;UBERON:0003688,9.49e-09,6;UBERON:0002358,9.49e-09,6;UBERON:0003684,9.49e-09,6;UBERON:0001178,9.49e-09,6;UBERON:0000956,2.33e-08,25;UBERON:0000203,2.33e-08,25;UBERON:0004923,8.23e-08,66;UBERON:0009663,1.69e-07,7;UBERON:0005631,2.33e-07,14;UBERON:0000158,2.33e-07,14;UBERON:0000305,3.08e-07,7;UBERON:0003076,5.47e-07,15;UBERON:0003057,5.47e-07,15 | |||
|phase1_expression=9.6289541013395,6.63711624062048,8.17535543756633,16.0117277365009,4.02264984984559,4.36169262050184,2.53299878168311,0,0.261185628199839,0,0,3.27662058195258,1.58260186937072,0.247532705920093,0.994192127183747,0,0.602694528023977,2.19093027116212,0.975865597581014,0,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0.601633342410425,0.217010870715852,0.223915474239924,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0.521482918420201,0.217188844705117,0,0,0,0,0,0.209658645508376,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334372990781356,0,0,0,0.222820913770347,0,0.221533894583621,0,0,0.130059347559878,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0.722878304769133,0.50133791063589,0.434539556882471,0,0.973269740605272,0.756278537312543,0.221729397462564,0.175669571386252,0.72038491523742,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0.805658634218294,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,4.96971951695318,1.01304409331664,3.04541115870403,1.14734648299525,0.709336764396714,1.68203280042692,1.06748995729705,1.2333377420858,0.622422070799533,0.538842688278752,0.326923806226917,0.908144565869588,1.72852777344,0,0,0.570471821544449,0,0.23486899728753,0,0.140450806702248,0.61246251376468,0.368502951935304,0.413303124703062,5.94001428641027,2.47266929278557,0,0,0.336672227908132,0.125118519871964,1.93944880838928,1.31693286264251,2.45190236639216,2.55404700141215,0.113432183160021,3.40840307808838,0.640672166455702,3.17897851739343,2.70081986475962,2.26715564324566,5.92573242104947,1.48893485065272,4.72573730275545,5.74878330451072,2.77677151668526,1.93304787148829,6.46584227275248,0.710019185033229,0.604512589365842,2.03472710772585,1.15956511897978,0.272746120590835,1.43402297694502,0,0,0,0,0,0,1.56449532329816,1.28648187638577,2.76269842704961,3.71494342425583,2.88751792667834,0.354920400119532,0.337169380156203,0.964044119533928,0.772057809126758,1.08939722046203,0.237270619111097,0.539325232640658,0.392442930250692,0.38474715694639,0,0,0,1.47008711385542,0,0,0,0,0.122988438543114,0.171567810298526,0.98775256867763,0,0.502644862058154,0.0925884451585296,0,0,0,0,0.352226082707465,0.288732895522148,0,0.380508304469197,0.790204397959275,0,0,0,0.148631162288728,0.93733833986777,2.01578553838631,0.425325291727159,0.806026704325635,0.871901815541886,0.383382679165211,0.492663237895943,0.088048434013226,0,0,0,0.126995788584338,0,0,0,0.411309970813294,0,0,0.112131084345361,0,0.07333828582095,0.904902010304444,0,0,1.59562869950922,1.04007436911366,0.257207374262142,1.41849132023278,0,0.714889968290738,0,0,0.325736184293735,0,0,2.1100756394171,2.61460037580088,0.499864955910285,0,0,0,0.239624855491583,0,2.85273810081437,1.30303176000821,0.821905290201534,2.68591444859843,0,0,0.215627574859517,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0.271265023699736,7.69492187663986,7.49401752948079,6.93890626149313,6.91134348457008,1.50473049863859,6.82222512167955,5.17365356462525,0,0.553107505625109,1.47702144595741,0.979005787313703,0,0,0.215714200818617,0,2.42502057157008,0,1.5119514666484,13.397821622214,14.1185015425017,9.26178311629143,8.32904470162056,9.21073048320066,6.75586468803151,2.96836132889982,0.154209693802656,0,0.0821271560138091,0,0.581051892299796,0.120859449591622,1.00253235151642,0.368323955743585,0.114814448164607,1.27463817604702,0.131124414959424,0,0.15403067420883,0,0,0.422206515571503,0,0,0,0,0.270946437543853,0.501689773854853,0.254876273045038,0,0,0,0,0,0.328014645699706,0.325378394664303,1.03041011647722,0.0915694648183434,0.082509499920588,0,1.30012049207304,0,0,0.154048617114644,0.15350367472613,0.827019434907183,0.214840489736547,0.290033387828457,0.426133137080504,0.979352392114111,0.165284915360978,0.192190067365106,1.78657797492418,0.30347334256665,1.39453664789186,3.1481234683064,0,0.616067160352178,1.06461206063404,0.869932992075073,0.74129687641568,0.858749320451947,2.232950216158,0.632758849437452,1.5250415513906,0.255897791311334,0,0.318203247925937,0.78494864019923,0.719489830333259,0.274537029736055,0.353437207037059,0.404364963146632,1.58510321173008,0,0.48763373908959,1.21856744815642,0,0.9554993798559,0,1.13008116620243,0.551365343546124,0.66343897524122,0.438450885253763,0.578775534266688,0.655894752046633,0,1.239293992399,0,0.717056761020258,0.392996164052485,1.07001315444375,0,1.05553817648832,1.31717957183961,0,0,0.288666338176536,0.670302275535787,0,0.0941438007767792,0.43050537267123,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447352215784832,0.166849141711909,0,0,0,0,0,0,0,0.586032717087576,0,0,0,6.20735660317994,2.07875276582847,7.06469614828234,6.95903353436409,2.53204949538923,0.445234820091624,0,0,1.79323189425963,0.828851746593443,0,0,0,4.0435146396035,0.449341755736634,0,0,0.0986434056369336,0,1.11136990144637,0.969332746095218,1.94813006139888,0,0.2604277610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| |||
|short_description=p5@GRAMD3 | |||
}} |
Revision as of 07:09, 22 January 2014
Short description: | p5@GRAMD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GRAMD3_5end |
Coexpression cluster: | C1274_Preadipocyte_Olfactory_Adipocyte_amniotic_serous_spindle_mesodermal |
Association with transcript: | 49bp_to_ENST00000505720, ENST00000513978, ENST00000514099_5end |
EntrezGene: | GRAMD3 |
HGNC: | 24911 |
UniProt: | D6RFH3D6R9P9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.55e-10 | 76 |