FFCP PHASE1:Hg19::chr5:121647446..121647460,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9627 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11139 | |||
|TSSclassifier=strong | |||
|UniProt=D6RBR2 | |||
|association_with_transcript=0bp_to_ENST00000508681_5end | |||
|description=CAGE_peak_4_at_SNCAIP_5end | |||
|id=chr5:121647446..121647460,+ | |||
|ontology_enrichment_celltype=CL:0002319!9.04e-10!25;CL:0002139!4.63e-08!24;CL:0000047!2.14e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.42e-11;2!CL:0002138;2.73e-08;6!CL:0000540;4.18e-08;6!CL:0000404;4.18e-08;6!CL:0002504;1.19e-07;3!CL:1000279;1.19e-07;3!CL:1000280;1.19e-07;3!CL:0002139;3.50e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,7.87e-16,8;CL:0005020,2.02e-08,6;CL:0002138,2.02e-08,6;CL:0005022,2.02e-08,6;CL:0000540,3.70e-08,6;CL:0000031,3.70e-08,6;CL:0000404,3.70e-08,6;CL:0002504,1.46e-07,3;CL:1000279,1.46e-07,3;CL:1000280,1.46e-07,3;CL:0002139,3.38e-07,24 | |||
|ontology_enrichment_development_v019=CL:0005022;2.73e-08;6!CL:0000031;4.18e-08;6!UBERON:0010115;9.65e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;5.88e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,5.90e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!3.65e-18!82;UBERON:0007023!8.61e-18!115;UBERON:0005743!9.27e-18!86;UBERON:0000073!2.06e-15!94;UBERON:0001016!2.06e-15!94;UBERON:0001049!4.67e-14!57;UBERON:0005068!4.67e-14!57;UBERON:0006241!4.67e-14!57;UBERON:0007135!4.67e-14!57;UBERON:0002616!3.27e-12!59;UBERON:0000955!3.68e-12!69;UBERON:0006238!3.68e-12!69;UBERON:0003075!4.80e-12!86;UBERON:0007284!4.80e-12!86;UBERON:0001893!6.63e-12!34;UBERON:0004121!1.32e-11!169;UBERON:0003080!1.55e-11!42;UBERON:0002791!2.01e-11!33;UBERON:0002346!5.62e-11!90;UBERON:0001869!5.67e-11!32;UBERON:0002020!6.13e-11!34;UBERON:0003528!6.13e-11!34;UBERON:0000924!6.22e-11!173;UBERON:0006601!6.22e-11!173;UBERON:0002780!8.73e-11!41;UBERON:0001890!8.73e-11!41;UBERON:0006240!8.73e-11!41;UBERON:0000477!3.44e-10!286;UBERON:0004111!5.97e-10!241;UBERON:0000153!8.92e-10!129;UBERON:0007811!8.92e-10!129;UBERON:0000033!4.98e-09!123;UBERON:0003056!6.28e-08!61;UBERON:0000468!2.30e-07!659;UBERON:0000956!3.07e-07!25;UBERON:0000203!3.07e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002360;1.95e-11;2!UBERON:0000094;1.95e-11;2!UBERON:0010743;1.95e-11;2!UBERON:0005383;1.19e-07;3!UBERON:0005382;1.19e-07;3!UBERON:0005795;5.57e-07;1!UBERON:0002363;9.65e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002360,3.12e-11,2;UBERON:0000094,3.12e-11,2;UBERON:0010743,3.12e-11,2;UBERON:0005383,9.72e-08,3;UBERON:0005382,9.72e-08,3 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,2.57612388417951,0.547497700291537,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0.144846518960824,0,0,0.283604451492204,0,0.43917392846563,0.327447688744282,0,0,0,0,0,0,0,0,0.79504962946682,0,1.04142150482278,0,0,0.275118041940067,0.208994966536811,1.55050055501597,1.42306505074684,2.67776490211736,0,0.760272105718513,2.19655851793353,0,0.81014194788176,1.42879565254528,0.22452937262617,0.225222960966644,0,0,0.549605231791222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.75201142912821,2.22540236350701,0,0,0,0,0,0.877955241761676,0,2.55404700141215,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0,0.265059536642971,0.232387885739037,0.310983165046111,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01637849688985,3.90419561572865,1.54657762555539,1.00509759200609,1.91381625495949,0,0,0,0.858840442033979,1.00034104211935,0,0,0,0,0,0.300946099727719,0,0,0.664225598535437,0.368738337083406,0.347534457872331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0.229628896329213,0.364182336013434,1.18011973463482,0,0,0,0,0,0,0.170093705276516,0.647747748306418,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0.183138929636687,0.082509499920588,0,0,0,0,0,0,0,0,0.435050081742686,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,1.37268514868027,1.06031162111118,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,1.06428319221179,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,2.60437492399938,0.885741385813839,1.5677537021303,0,0.552896299656123,0.295547618953547,1.09692698576986,0,0,2.46240827212151,0,0,0,0.217294743844016,0.31900115973192,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619202951523374,0,0,0,0,0.067401132980677,0.802577647298789,0.702793337176017,0,0,0,0.394584402849391,0,0.91821828489147,2.0851571277401,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,5.1595809741485,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0.213452994739353,2.19790570540343,0,0,0.171594997861965,0,0,0,0.407712618220842,0.732219924186332,0.101998217636322,0,0,0.273810757783986,0,0,0,0.279282401272254,0.458320848023367,0.717873024576814,0,0,0,0.268733889946905,0,0,0,0,0,0.492137407573744,0,0.795229689809303,0.136203406111576,0.321506296930038,0.137539436597234,0,0,0,0.182248669974074,0,0.157611414598396,0.944182586429966,0,0,0,0,0,0,0,0,0,0,0,0,0.679872549120754,0.146552233678082,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.248385611765534,0.830091809617385,0,0,0,0,0,0.434763085832475,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0.521745061811734,0,0,0,0,0,0,1.99047944349308,0,0,0.336749488765919,0,0,0,0,0,0.231522474323834,0,0,2.47041157728778,0,0.706756583783524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.159633859057151,0.205116364240755,0.252071696221718,0.207471757392654,0,0,0,0.353909170043221,0,0.115525666150338,0,0,0.397832444232549,2.78278214892252,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.126831620387814,0.546974809018219,0,0,0,1.40538670403555,0,0,0,0,0.620916591138472,0,0,0.339848664884159,0.131545547125698,0,0,0.313972371402056,1.25692471932802,0.560544326627578,0,0,0,0.857718530119876,0,0,0,4.81026818838152,0,0.17071847709395,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,1.63757624423474,0,0,0,0,0.301925687133347,0.154348316215889,0.437119121007915,0,0.245148321753905,0,0,0,0.4226557275834,0,0.281951753939561,0.580120991762195,0,0,0,0,1.46067277649303,0,0.143339583151451,0,0.0679914901909147,1.74540276136151,0,0,0,0,0.378499274505237,0,0,0,0,0,0,0.606229585745915,0.267964130156178,0,0.20686599172379,0,0.952257725854961,0.258355639344024,0.31037357147929,0,0.12729431655633,0.202117188958219,0.217716747896961,0.342233301085281,0.202056159043763,0.502055437748735,0,0.569822880276821,0,0,0,0,0.855690109280065,6.91723503136755,0.665756774185513,0.402547587182052,0 | |||
|short_description=p4@SNCAIP | |||
}} |
Revision as of 07:05, 22 January 2014
Short description: | p4@SNCAIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SNCAIP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000508681_5end |
EntrezGene: | SNCAIP |
HGNC: | 11139 |
UniProt: | D6RBR2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 7.87e-16 | 8 |
lymphangioblast | 2.02e-08 | 6 |
endothelial cell of lymphatic vessel | 2.02e-08 | 6 |
vascular lymphangioblast | 2.02e-08 | 6 |
neuron | 3.70e-08 | 6 |
neuroblast | 3.70e-08 | 6 |
electrically signaling cell | 3.70e-08 | 6 |
enteric smooth muscle cell | 1.46e-07 | 3 |
smooth muscle cell of large intestine | 1.46e-07 | 3 |
smooth muscle cell of colon | 1.46e-07 | 3 |
endothelial cell of vascular tree | 3.38e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
meninx | 3.12e-11 | 2 |
membrane organ | 3.12e-11 | 2 |
meningeal cluster | 3.12e-11 | 2 |
caudate-putamen | 9.72e-08 | 3 |
dorsal striatum | 9.72e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 5.90e-07 | 1 |