FFCP PHASE1:Hg19::chr5:98130065..98130086,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=285704 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=26896 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-178bp_to_BC020513_5end | |||
|description=CAGE_peak_10_at_RGMB_5end | |||
|id=chr5:98130065..98130086,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.88e-18!180;CL:0000057!5.93e-14!75;CL:0002620!2.75e-11!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.10e-15;23!CL:0000134;6.64e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,3.82e-15,23;CL:0000057,3.58e-11,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;3.74e-09;5!DOID:450;3.74e-09;5!DOID:66;3.74e-09;5!DOID:423;3.74e-09;5!DOID:0080000;3.74e-09;5!DOID:11722;3.74e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.89e-09,5;DOID:450,1.89e-09,5;DOID:66,1.89e-09,5;DOID:423,1.89e-09,5;DOID:0080000,1.89e-09,5;DOID:11722,1.89e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.61e-11!95;UBERON:0002199!3.50e-11!45;UBERON:0002416!3.50e-11!45;UBERON:0002097!4.06e-11!40;UBERON:0000914!3.24e-10!83;UBERON:0002329!3.24e-10!83;UBERON:0003077!3.24e-10!83;UBERON:0003059!3.24e-10!83;UBERON:0007282!3.24e-10!83;UBERON:0009618!3.24e-10!83;UBERON:0007285!3.24e-10!83;UBERON:0000475!3.88e-10!365;UBERON:0004290!4.25e-09!70;UBERON:0000486!5.07e-09!82;UBERON:0002385!2.16e-07!63;UBERON:0001015!2.16e-07!63;UBERON:0000383!2.16e-07!63;UBERON:0000468!4.03e-07!659;UBERON:0001134!5.36e-07!61;UBERON:0002036!5.36e-07!61;UBERON:0003082!5.36e-07!61;UBERON:0000467!5.69e-07!625;UBERON:0002020!7.70e-07!34;UBERON:0003528!7.70e-07!34;UBERON:0000480!7.94e-07!626;UBERON:0001869!8.94e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;7.75e-11;41!UBERON:0002199;2.10e-09;46!UBERON:0002416;2.10e-09;46!UBERON:0003102;2.09e-08;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,6.99e-15,46;UBERON:0002416,6.99e-15,46;UBERON:0002097,2.66e-14,41;UBERON:0003102,2.10e-10,99 | |||
|phase1_expression=0.363356758541113,1.71280419112787,0.140954404095971,0,0.446961094427288,0,0,0,0.783556884599516,0.245733936501509,0,0.218441372130172,0,0,0,2.6893005858071,0.602694528023977,0.730310090387373,2.43966399395253,0,0.408001382488506,0.626909442956176,0.286235987131057,0.684372125364421,0.125542639594803,0,0,0,0,0,0,0,0.30120591877825,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0.541607727530031,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,0.50133791063589,0.724232594804119,0.795285947051099,0.486634870302636,0.378139268656271,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0.694281003215189,0,0,0.550236083880135,0,0.258416759169329,1.06729878806013,0,0.402829317109147,0.760272105718513,0.24406205754817,0,0.81014194788176,0.0892997282840798,0,0,0,0,0.549605231791222,0,0,0,1.98788780678127,0.633152558322899,0.397227542439656,1.14734648299525,0.354668382198357,0.560677600142307,0,0.98667019366864,0,0.404132016209064,0.163461903113459,0.151357427644931,0,0,0.624320153660641,0.570471821544449,1.19558944441441,0.939475989150119,0.809364721840658,1.54495887372473,0.816616685019573,2.08818339430006,0.206651562351531,0,1.7308685049499,0.910161361938026,0.718618141816238,0.505008341862199,1.12606667884768,1.10825646193673,0.438977620880838,2.75839016219118,0.901428353439581,0.226864366320042,5.02290979928813,2.77624605464138,4.4505699243508,3.90118424909723,1.75189299705346,1.03056216018252,1.30281799432113,2.53164498361899,0.487185025805993,3.28163906517349,1.47279837827679,2.58633690910099,4.61512470271599,3.82857973265033,2.03472710772585,0.57978255948989,0,0.286804595389004,0.243947412259191,0.397589304964456,0.464775771478074,0.207322110030741,0,0.36497735907583,0,8.36213219650751,1.38134921352481,4.17931135228781,2.88751792667834,0.118306800039844,0.168584690078102,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0.982827216677626,0,0,0.122988438543114,0.171567810298526,0.219500570817251,0,0.603173834469785,0.0925884451585296,0,1.03993478527958,1.44331342025273,1.04337364477569,0.234817388471643,0.433099343283221,0,0.570762456703795,0.790204397959275,0,0,0,0,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0.253991577168676,1.14596527667483,0,0,0.514137463516618,0,0.285826432630578,0.112131084345361,0,0.22001485746285,0.258543431515556,0,7.607724773004,3.45719551560332,2.08014873822732,0.257207374262142,1.41849132023278,0.266422179016099,0.142977993658148,0,0,0.977208552881205,0,0,0.904318131178758,0,0.199945982364114,0,0,2.10833939483032,0.479249710983165,1.14861935834114,0,2.46128221334885,2.4657158706046,2.50685348535854,0,0,0,0,0,0,0,0.335032530668698,1.91381625495949,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,1.45579603071565,13.3821741597871,1.73472656537328,1.87426263988341,0,0,3.10419213877515,0.664225598535437,0.368738337083406,2.43274120510632,0.195801157462741,1.37257369524342,0,0,0,0,0,1.20956117331872,0.496215615637554,0,0.841980283299221,0.640695746278505,0,0.804269605718038,0,6.47680713971153,1.42049380250502,0.9033987161519,2.59627214591811,3.7187321107187,0.362578348774867,1.00253235151642,0.184161977871793,0.459257792658427,2.73136752010076,1.18011973463482,0,0.15403067420883,0,0,0.105551628892876,0,0,0,1.54227252690289,0,0.501689773854853,0.254876273045038,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0.183138929636687,0.082509499920588,1.14853107599234,0.650060246036521,0,0.676695028044854,0.770243085573222,0.15350367472613,0.551346289938122,0.322260734604821,0.435050081742686,0.681813019328807,0.623224249527161,0.661139661443912,0.576570202095319,0.255225424989168,0.2023155617111,3.71876439437829,3.1481234683064,0.6970372701606,0.308033580176089,0,0,0.55597265731176,0.143124886741991,0.372158369359667,0.316379424718726,0,0.767693373934002,1.71175595213568,0.318203247925937,1.56989728039846,0.539617372749944,0.274537029736055,0.471249609382746,0.202182481573316,0,1.26377536871694,0.48763373908959,5.60541026151954,1.05650146756755,0.682499557039929,0.565621727814851,0,0,0.66343897524122,2.63070531152258,1.15755106853338,0,0.405820753925408,0.92947049429925,0.845086807596724,0.573645408816206,0.196498082026242,0,0.709522128141196,1.05553817648832,2.30506425071931,0,0,0,0,0,0.188287601553558,0.86101074534246,0,0,0.229723400206959,0,0,0.569647187174163,0,0,0,0,0.79312517629427,0,0,0,0.185803175125719,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0.71623345421307,0.296964680832639,0,1.9882952955326,0.984685914873589,1.00177834520615,0.494411622680279,0.422250816255987,0,0,0,0.20453736500431,0,13.0636626817959,0.269605053441981,0,0,0.0986434056369336,0,1.11136990144637,1.93866549219044,0.556608588971108,0,0,0.0874599999961957,0.724999575434793,0.341380344856499,0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| |||
|short_description=p10@RGMB | |||
}} |
Revision as of 06:40, 22 January 2014
Short description: | p10@RGMB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_RGMB_5end |
Coexpression cluster: | NA |
Association with transcript: | -178bp_to_BC020513_5end |
EntrezGene: | RGMB |
HGNC: | 26896 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 3.82e-15 | 23 |
fibroblast | 3.58e-11 | 76 |
Ontology term | p-value | n |
---|---|---|
integument | 6.99e-15 | 46 |
integumental system | 6.99e-15 | 46 |
skin of body | 2.66e-14 | 41 |
surface structure | 2.10e-10 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.89e-09 | 5 |
myotonic disease | 1.89e-09 | 5 |
muscle tissue disease | 1.89e-09 | 5 |
myopathy | 1.89e-09 | 5 |
muscular disease | 1.89e-09 | 5 |
myotonic dystrophy | 1.89e-09 | 5 |