FFCP PHASE1:Hg19::chr5:43290298..43290315,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=3157 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5007 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-337bp_to_AL050004_5end | |||
|description=CAGE_peak_6_at_HMGCS1_5end | |||
|id=chr5:43290298..43290315,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000064;3.10e-09;3!CL:0000067;3.10e-09;3!CL:0005012;3.10e-09;3!CL:0002304;3.10e-09;3!CL:0002504;2.14e-08;3!CL:1000279;2.14e-08;3!CL:1000280;2.14e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.51e-09,3;CL:0000067,1.51e-09,3;CL:0005012,1.51e-09,3;CL:0002304,1.51e-09,3;CL:0002504,1.34e-08,3;CL:1000279,1.34e-08,3;CL:1000280,1.34e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!6.69e-08!235;DOID:14566!2.75e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;3.10e-09;3!UBERON:0001775;3.10e-09;3!UBERON:0000488;5.27e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,1.51e-09,3;UBERON:0001775,1.51e-09,3;UBERON:0000488,3.10e-07,4 | |||
|phase1_expression=0,0.642301571672949,0,0,0,0.872338524100369,0,0,0.522371256399677,0,0,0,0,0.247532705920093,0,0,1.20538905604795,0.730310090387373,0,0.246242116153576,0,0.313454721478088,0.572471974262113,0.410623275218653,2.88748071068046,0.458480434487708,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0.154934401160603,0.426507697462265,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0.411167888021826,0.309706370895104,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0.639337125799041,0,0,0,0.290209238628584,1.13477044938228,1.24564449799115,0,1.0429658368404,0,0,0.368277635987565,0.316462387440884,0.211255286311942,0.212604299965044,0.209658645508376,0,0,0,0,0,0.182664153764634,0,0,0,0.853460445133014,0.400395987036012,0,0,0,0,0,0.764546456250458,0,0,0.263384084775077,0,0,0.822405995998037,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0.128091319725675,0.390178042679635,0.328875809207352,0,0,0.14828656316206,0,0,0.339928028092699,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0.670700859703636,0.12786256184353,0,0,0,0.795285947051099,0,1.79616152611729,2.4390233720882,2.63504357079378,0,0,0,0.324547393654683,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0.367663080345869,0,0.0892997282840798,0.22452937262617,0.788280363383256,0,0,0.366403487860815,1.31780417436063,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0.24666754841716,0,0.67355336034844,0.490385709340376,0,0.576175924479999,0,0,0,1.79338416662161,0.469737994575059,0.323745888736263,0.561803226808994,0.61246251376468,1.96534907698829,0.206651562351531,0,0,0,0,2.52504170931099,0.625592599359821,0,0,0,0.150238058906597,0.453728732640084,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0,0.573609190778008,0.487894824518382,0.397589304964456,0.348581828608555,0.518305275076852,0,2.55484151353081,0,0,0,0.464367928031979,0,0.118306800039844,0.505754070234305,0,0.110293972732394,0,0,0,0.588664395376038,0.38474715694639,0,0,0,0,5.07020139287323,1.96565443335525,2.95394953340702,2.20731549707325,0.860919069801795,0.171567810298526,0.878002283269004,0,5.12697759299317,1.01847289674383,0,0,0,0.34779121492523,0,0.144366447761074,0.925971025153221,0.570762456703795,0,0,0.246217006087397,0.234004265139238,0.297262324577456,0,0,0.567100388969546,0.0895585227028483,0.290633938513962,0,0,0.176096868026452,0.207328115540772,0,0,0.190493682876507,0,0,1.71072446022705,0.616964956219941,0.300343057843917,1.42913216315289,0,0,0.2933531432838,0.258543431515556,0,0.845302752556,0.797814349754612,0,0,0,0,0.714889968290738,0,0,0,0.710783897485092,0.791951872933429,0.301439377059586,0,1.09970290300263,0,0,0,0.239624855491583,0,0,0,0.410952645100767,0.179060963239896,0.112085143993527,0,0.215627574859517,0.256686072559497,0,0,2.31986643833309,0.167516265334349,0.637938751653163,0,0,0,0.12269149171914,2.00068208423871,0.813795071099207,1.03985430765404,0,0.157702415033935,0,0,0,1.03473071292505,0,0,0.0868836144680828,0,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,0.512556597022804,0,0.804269605718038,0,0,0.177561725313127,0,0,0.116210378459959,1.57117284469109,0.40101294060657,0.368323955743585,0,0,0.131124414959424,0,0.616122696835318,0,1.46139224653261,0.105551628892876,1.13733384070897,0,0.863663664408557,0,0,0,0,0,0,0.219259876645935,0,2.56450125116389,0,0,0,0.27470839445503,0.247528499761764,0,0,0,0,1.54048617114644,1.22802939780904,0.689182862422653,1.07420244868274,0.870100163485371,0.93749290157711,0.178064071293475,0.165284915360978,0,0.382838137483752,0,0,0,0,0,0,0,0,0,2.60510858551767,0.949138274156178,0.762520775695299,0,0.855877976067841,0,0,1.2591072030832,1.37268514868027,1.64937363283961,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,1.31178950409327,0,0.30982349809975,0,0.430234056612155,0.491245205065606,0,0,0.211107635297664,0,0,0,0.48111056362756,0,0,0.188287601553558,0,0,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0.213648142254946,0,0.735120647943095,1.48642540100575,0.144269212976445,0.355709216742071,0.318852545457645,0.59873811429845,0.191505370132367,2.32840940996271,0,1.40398589056729,0,0.47003968731907,0,0,0,0.201799707191048,1.27753871307098,0.343505344755765,0,0,0.166849141711909,0.390776190804081,1.39203086947621,0,1.08182271390393,0,1.4098700508785,0.37428108081644,0,0,0.111443384277478,0.284136146806413,0,0,0,0.994147647766298,0.140669416410513,0,0.329607748453519,0.211125408127993,0,0,0.503865495708552,0,0.246169610922139,0.311039587661807,0.179736702294654,0.537063524026827,0,0,0,0,0.969332746095218,0,1.99613798001194,0.260427761085233,0.699679999969566,0,0.1137934482855,0.254253650292766,0.709163045303809,1.72371686620732,0,0,0,0,0,0.110579259931225,0.295547618953547,0.87754158861589,0.21787692703798,0.139423744278603,0.0769502585037971,0.113942055847001,0.23056390438806,0.448788222048861,0.760531603454056,0,0.0915975934018623,0.533034776018635,0,0,0.664846727600626,0.902382642468723,0.980312671588698,0.671286347903371,0.569261198172555,0.317873157960757,1.476986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| |||
|short_description=p6@HMGCS1 | |||
}} |
Revision as of 05:17, 22 January 2014
Short description: | p6@HMGCS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_6_at_HMGCS1_5end |
Coexpression cluster: | NA |
Association with transcript: | -337bp_to_AL050004_5end |
EntrezGene: | HMGCS1 |
HGNC: | 5007 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.51e-09 | 3 |
ciliated epithelial cell | 1.51e-09 | 3 |
multi-ciliated epithelial cell | 1.51e-09 | 3 |
non-pigmented ciliary epithelial cell | 1.51e-09 | 3 |
enteric smooth muscle cell | 1.34e-08 | 3 |
smooth muscle cell of large intestine | 1.34e-08 | 3 |
smooth muscle cell of colon | 1.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 1.51e-09 | 3 |
ciliary body | 1.51e-09 | 3 |
atypical epithelium | 3.10e-07 | 4 |