FFCP PHASE1:Hg19::chr4:83719884..83719971,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79966 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21088 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BSN4 | |||
|association_with_transcript=0bp_to_ENST00000273908,ENST00000282709_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_SCD5_5end | |||
|id=chr4:83719884..83719971,- | |||
|ontology_enrichment_celltype=CL:0000220!7.88e-12!246;CL:0002321!2.90e-11!248;CL:0002139!5.80e-09!24;CL:0000076!1.97e-08!62;CL:0000115!2.43e-07!35;CL:0000071!2.49e-07!18;CL:0002546!2.49e-07!18;CL:0002078!3.87e-07!44;CL:0000222!4.82e-07!119;CL:0000221!8.95e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.45e-09;24!CL:0000071;2.45e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,5.45e-11,250;CL:0002139,5.32e-09,24;CL:0000076,9.31e-09,63;CL:0000115,2.08e-07,36;CL:0000071,2.33e-07,18;CL:0002546,2.33e-07,18;CL:0002078,3.62e-07,45;CL:0000221,6.19e-07,72;CL:0000222,8.04e-07,121 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.92e-09;82!CL:0002546;2.45e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002780;3.15e-18;41!UBERON:0001890;3.15e-18;41!UBERON:0001893;6.00e-18;34!UBERON:0000073;6.65e-18;53!UBERON:0002616;6.65e-18;53!UBERON:0003528;7.15e-18;34!UBERON:0002020;7.15e-18;34!UBERON:0002791;9.52e-18;32!UBERON:0001869;1.05e-17;32!UBERON:0000956;3.21e-15;25!UBERON:0000203;3.21e-15;25!UBERON:0002619;5.90e-15;22!UBERON:0001017;1.35e-14;75!UBERON:0000955;2.04e-14;68!UBERON:0001950;1.04e-13;20!UBERON:0001016;2.62e-13;83!UBERON:0004732;5.91e-08;13!UBERON:0004638;2.45e-07;18!UBERON:0001986;2.45e-07;18!UBERON:0004852;2.45e-07;18!UBERON:0004733;2.54e-07;12!UBERON:0002028;2.54e-07;12!UBERON:0000125;3.94e-07;9!UBERON:0002308;3.94e-07;9!UBERON:0002420;4.30e-07;9!UBERON:0007245;4.30e-07;9!UBERON:0010009;4.30e-07;9!UBERON:0010011;4.30e-07;9!UBERON:0000454;4.30e-07;9!UBERON:0000947;8.07e-07;21!UBERON:0010191;8.07e-07;21!UBERON:0007023;8.41e-07;114!UBERON:0004573;9.58e-07;33!UBERON:0004571;9.58e-07;33!UBERON:0004121;9.62e-07;165 | |||
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| |||
|short_description=p1@SCD5 | |||
}} |
Revision as of 01:58, 22 January 2014
Short description: | p1@SCD5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SCD5_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000273908, ENST00000282709_5end |
EntrezGene: | SCD5 |
HGNC: | 21088 |
UniProt: | Q9BSN4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 5.45e-11 | 250 |
endothelial cell of vascular tree | 5.32e-09 | 24 |
squamous epithelial cell | 9.31e-09 | 63 |
endothelial cell | 2.08e-07 | 36 |
blood vessel endothelial cell | 2.33e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.33e-07 | 18 |
meso-epithelial cell | 3.62e-07 | 45 |
ectodermal cell | 6.19e-07 | 72 |
mesodermal cell | 8.04e-07 | 121 |