FFCP PHASE1:Hg19::chr4:69929665..69929672,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2794 | |||
|description=CAGE_peak_at_chr4:69929665..69929672,+ | |||
|id=chr4:69929665..69929672,+ | |||
|ontology_enrichment_celltype=CL:0000313!3.85e-12!1;CL:0000181!6.88e-09!12;CL:0000417!6.88e-09!12;CL:0000668!6.88e-09!12;CL:0000414!6.88e-09!12;CL:0000412!6.88e-09!12;CL:0000182!6.88e-09!12;CL:0002149!1.50e-08!6;CL:0002255!1.50e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002149;2.54e-27;6!CL:0002255;2.54e-27;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,2.72e-27,6;CL:0002255,2.72e-27,6 | |||
|ontology_enrichment_development_v019=UBERON:0005795;7.21e-17;10!UBERON:0003918;7.21e-17;10!UBERON:0007687;7.21e-17;10 | |||
|ontology_enrichment_disease=DOID:2152!3.85e-12!1;DOID:299!4.25e-11!25;DOID:3001!1.50e-08!6;DOID:305!2.18e-07!106;DOID:4468!5.41e-07!2;DOID:120!7.01e-07!27;DOID:4929!9.54e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3001;2.54e-27;6!DOID:4468;5.69e-21;2!DOID:299;4.73e-15;25!DOID:120;5.30e-14;27!DOID:193;4.27e-13;29 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,2.72e-27,6;DOID:4468,5.70e-21,2;DOID:299,4.84e-15,25;DOID:120,5.42e-14,27;DOID:193,4.36e-13,29 | |||
|ontology_enrichment_uberon=UBERON:0001000!1.25e-12!1;UBERON:0005352!1.25e-12!1;UBERON:0004913!3.08e-12!1;UBERON:0003703!3.08e-12!1;UBERON:0001174!3.08e-12!1;UBERON:0004914!3.08e-12!1;UBERON:0004911!3.85e-12!1;UBERON:0008835!2.94e-08!22;UBERON:0003894!2.94e-08!22;UBERON:0009854!6.60e-08!23;UBERON:0004175!1.80e-07!25;UBERON:0007499!2.75e-07!25;UBERON:0009497!2.75e-07!25;UBERON:0000015!2.75e-07!25;UBERON:0002423!2.75e-07!25;UBERON:0006235!2.75e-07!25;UBERON:0004161!2.75e-07!25;UBERON:0009856!5.17e-07!26;UBERON:0005172!6.67e-07!55;UBERON:0005173!6.67e-07!55 | |||
|ontology_enrichment_uberon_v019=UBERON:0000995;2.29e-10;17!UBERON:0003975;7.58e-10;18!UBERON:0004175;1.39e-08;21!UBERON:0002113;1.25e-07;24!UBERON:0011143;1.25e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000995,1.42e-08,21;UBERON:0005795,3.15e-08,22;UBERON:0003975,3.15e-08,22;UBERON:0004175,2.35e-07,25;UBERON:0002113,4.02e-07,26;UBERON:0003918,4.02e-07,26;UBERON:0011143,4.02e-07,26;UBERON:0005095,4.02e-07,26;UBERON:0007687,4.02e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30586246527318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315132729228895,0.329663433524666,0.202210631562555,0,0,0,0,0,0,0,0,0,0,0,2.52178263357434,0.0524545881349981,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512483037175893,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43325506366115,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24082554265728,2.8666168169323,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:69929665..69929672,+ | |||
}} |
Revision as of 01:18, 22 January 2014
Short description: | p@chr4:69929665..69929672, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr4:69929665..69929672, + |
Coexpression cluster: | C2794_clear_kidney_serous_renal_epididymis_Renal_transitionalcell |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 2.72e-27 | 6 |
stromal cell of endometrium | 2.72e-27 | 6 |
Ontology term | p-value | n |
---|---|---|
uterus | 1.42e-08 | 21 |
embryonic uterus | 3.15e-08 | 22 |
internal female genitalia | 3.15e-08 | 22 |
internal genitalia | 2.35e-07 | 25 |
kidney | 4.02e-07 | 26 |
kidney mesenchyme | 4.02e-07 | 26 |
upper urinary tract | 4.02e-07 | 26 |
kidney rudiment | 4.02e-07 | 26 |
kidney field | 4.02e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 2.72e-27 | 6 |
clear cell adenocarcinoma | 5.70e-21 | 2 |
adenocarcinoma | 4.84e-15 | 25 |
female reproductive organ cancer | 5.42e-14 | 27 |
reproductive organ cancer | 4.36e-13 | 29 |