FFCP PHASE1:Hg19::chr4:45735833..45735846,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_at_chr4:45735833..45735846,- | |||
|id=chr4:45735833..45735846,- | |||
|ontology_enrichment_celltype=CL:0000080!1.04e-13!6;CL:0002592!2.85e-12!3;CL:0000319!4.87e-10!1;CL:0000511!6.31e-10!1;CL:0002625!6.31e-10!1;CL:0000216!6.31e-10!1 | |||
|ontology_enrichment_celltype_v019=CL:0000319;4.61e-26;1!CL:0000511;1.11e-25;1!CL:0002625;1.11e-25;1!CL:0000216;1.11e-25;1!CL:0000159;9.40e-14;2!CL:0002592;1.74e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,4.61e-26,1;CL:0000511,9.79e-26,1;CL:0002625,9.79e-26,1;CL:0000216,9.79e-26,1;CL:0000159,9.40e-14,2;CL:0002592,1.81e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1115!4.18e-10!20;DOID:3030!4.87e-10!1;DOID:3112!5.31e-10!1;DOID:3347!5.79e-10!1;DOID:171!4.22e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:3030;4.61e-26;1!DOID:3112;5.93e-26;1!DOID:3347;7.62e-26;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,4.61e-26,1;DOID:3112,5.93e-26,1;DOID:3347,7.62e-26,1 | |||
|ontology_enrichment_uberon=UBERON:0001621!2.85e-12!3;UBERON:0001136!6.31e-10!1;UBERON:0001343!6.31e-10!1;UBERON:0004910!6.31e-10!1;UBERON:0005154!6.31e-10!1;UBERON:0005295!6.31e-10!1;UBERON:0004813!6.31e-10!1;UBERON:0005297!6.31e-10!1;UBERON:0005294!6.31e-10!1;UBERON:0010141!6.31e-10!1;UBERON:0005891!6.31e-10!1;UBERON:0002331!2.01e-08!10;UBERON:0000358!2.01e-08!10;UBERON:0000307!2.01e-08!10;UBERON:0000091!2.01e-08!10;UBERON:0000087!2.01e-08!10;UBERON:0007806!2.01e-08!10;UBERON:0008780!2.01e-08!10;UBERON:0005728!2.01e-08!10;UBERON:0003498!1.04e-07!5;UBERON:0005985!1.04e-07!5;UBERON:0002046!1.41e-07!5;UBERON:0004117!1.41e-07!5;UBERON:0007689!1.41e-07!5;UBERON:0007123!1.41e-07!5;UBERON:0003091!1.41e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;1.11e-25;1!UBERON:0001343;1.11e-25;1!UBERON:0004910;1.11e-25;1!UBERON:0004813;1.11e-25;1!UBERON:0002331;3.52e-23;10!UBERON:0000178;1.02e-15;15!UBERON:0000179;1.02e-15;15!UBERON:0000463;1.02e-15;15!UBERON:0004909;1.46e-13;2!UBERON:0000478;4.35e-10;24!UBERON:0003498;1.74e-09;3!UBERON:0005985;1.74e-09;3!UBERON:0001621;1.74e-09;3!UBERON:0002390;8.44e-08;32!UBERON:0005904;1.98e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,9.79e-26,1;UBERON:0001343,9.79e-26,1;UBERON:0004910,9.79e-26,1;UBERON:0005154,9.79e-26,1;UBERON:0005295,9.79e-26,1;UBERON:0004813,9.79e-26,1;UBERON:0005297,9.79e-26,1;UBERON:0005294,9.79e-26,1;UBERON:0010141,9.79e-26,1;UBERON:0005891,9.79e-26,1;UBERON:0002331,3.52e-23,10;UBERON:0000358,3.52e-23,10;UBERON:0000307,3.52e-23,10;UBERON:0000091,3.52e-23,10;UBERON:0000087,3.52e-23,10;UBERON:0007010,3.52e-23,10;UBERON:0007806,3.52e-23,10;UBERON:0008780,3.52e-23,10;UBERON:0005728,3.52e-23,10;UBERON:0000178,1.02e-15,15;UBERON:0000179,1.02e-15,15;UBERON:0000463,1.02e-15,15;UBERON:0004909,1.37e-13,2;UBERON:0000478,4.35e-10,24;UBERON:0001621,1.81e-09,3;UBERON:0005904,1.92e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.808729926293264,1.58510321173008,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874813840149763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.1225775627117,13.8391611620083,15.0367607287856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.240476460754601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,8.35627889762646,0,0,0,0,0,0,0,0,0,0,0,0,0.509197589862076,0,0.991486114072017,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0710797781803,0,0,0.60511520611056,0,0,6.05956094787358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380095503034311,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:45735833..45735846,- | |||
}} |
Revision as of 00:55, 22 January 2014
Short description: | p@chr4:45735833..45735846, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:45735833..45735846, - |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 4.61e-26 | 1 |
androgen binding protein secreting cell | 9.79e-26 | 1 |
seminiferous tubule epithelial cell | 9.79e-26 | 1 |
Sertoli cell | 9.79e-26 | 1 |
seromucus secreting cell | 9.40e-14 | 2 |
smooth muscle cell of the coronary artery | 1.81e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 9.79e-26 | 1 |
seminiferous tubule of testis | 9.79e-26 | 1 |
epithelium of male gonad | 9.79e-26 | 1 |
epithelial cord | 9.79e-26 | 1 |
sex cord | 9.79e-26 | 1 |
seminiferous tubule epithelium | 9.79e-26 | 1 |
testis sex cord | 9.79e-26 | 1 |
genital ridge | 9.79e-26 | 1 |
primitive sex cord of indifferent gonad | 9.79e-26 | 1 |
coelomic epithelium | 9.79e-26 | 1 |
umbilical cord | 3.52e-23 | 10 |
blastocyst | 3.52e-23 | 10 |
blastula | 3.52e-23 | 10 |
bilaminar disc | 3.52e-23 | 10 |
inner cell mass | 3.52e-23 | 10 |
cleaving embryo | 3.52e-23 | 10 |
connecting stalk | 3.52e-23 | 10 |
inner cell mass derived epiblast | 3.52e-23 | 10 |
extraembryonic mesoderm | 3.52e-23 | 10 |
blood | 1.02e-15 | 15 |
haemolymphatic fluid | 1.02e-15 | 15 |
organism substance | 1.02e-15 | 15 |
epithelium of gonad | 1.37e-13 | 2 |
extraembryonic structure | 4.35e-10 | 24 |
coronary artery | 1.81e-09 | 3 |
duct of male reproductive system | 1.92e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 4.61e-26 | 1 |
papillary adenocarcinoma | 5.93e-26 | 1 |
osteosarcoma | 7.62e-26 | 1 |