FFCP PHASE1:Hg19::chr4:19457034..19457063,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000511431_5end | |||
|description=CAGE_peak_1_at_ENST00000511431_5end | |||
|id=chr4:19457034..19457063,+ | |||
|ontology_enrichment_celltype=CL:0002149!5.19e-10!6;CL:0002255!5.19e-10!6;CL:0000188!1.68e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0002149;4.69e-16;6!CL:0002255;4.69e-16;6!CL:0002541;8.84e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,5.30e-16,6;CL:0002255,5.30e-16,6;CL:0002541,1.01e-08,3;CL:0000223,9.59e-08,58;CL:0000066,8.00e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0005795;1.06e-11;10!UBERON:0006603;2.76e-07;65 | |||
|ontology_enrichment_disease=DOID:0050687!1.89e-21!143;DOID:305!2.29e-20!106;DOID:14566!1.86e-16!239;DOID:162!4.49e-15!235;DOID:299!8.16e-13!25;DOID:3001!5.19e-10!6;DOID:120!5.56e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:299;6.48e-23;25!DOID:3001;4.69e-16;6!DOID:120;2.60e-11;27!DOID:193;2.44e-10;29!DOID:305;6.84e-10;106!DOID:0050687;4.38e-09;143!DOID:154;7.22e-07;2!DOID:4236;7.22e-07;2!DOID:5409;9.30e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.04e-28,143;DOID:305,1.19e-25,106;DOID:14566,1.91e-24,239;DOID:162,5.05e-23,235;DOID:299,6.47e-23,25;DOID:3001,5.30e-16,6;DOID:0050686,2.18e-12,137;DOID:120,2.81e-11,27;DOID:193,2.63e-10,29;DOID:7,6.70e-08,39;DOID:154,7.43e-07,2;DOID:4236,7.43e-07,2;DOID:5409,8.70e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0005795!1.40e-10!22;UBERON:0000995!1.21e-09!21;UBERON:0003975!4.86e-09!22;UBERON:0005156!6.82e-09!59;UBERON:0000990!6.82e-09!59;UBERON:0004175!8.55e-09!25;UBERON:0003133!3.57e-08!48;UBERON:0001443!4.25e-08!11;UBERON:0003134!1.07e-07!37;UBERON:0000474!1.07e-07!37;UBERON:0001737!2.36e-07!9;UBERON:0000310!3.90e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0000995;1.76e-13;17!UBERON:0003975;1.31e-12;18!UBERON:0004175;1.70e-10;21!UBERON:0003134;1.01e-09;33!UBERON:0000474;1.11e-09;37!UBERON:0003124;8.84e-09;3!UBERON:0000920;8.84e-09;3!UBERON:0003133;3.28e-07;44!UBERON:0003100;5.84e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005795,3.61e-14,22;UBERON:0000995,1.15e-12,21;UBERON:0003975,5.64e-12,22;UBERON:0003134,2.38e-10,37;UBERON:0000474,2.38e-10,37;UBERON:0004175,3.05e-10,25;UBERON:0003133,1.34e-09,48;UBERON:0005156,1.86e-09,59;UBERON:0000990,1.86e-09,59;UBERON:0003100,5.10e-09,41;UBERON:0000920,1.01e-08,3 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.70296429550139,0,0,0,0,0,0,0,0.491337269247072,0,0,0,0,0,2.02003336744879,0.500474079487857,0,0,0,0,0,0.179389635688862,0,0,0,0,1.8034837803194,1.67505170698431,0,0,0.252433774244115,0.0920498986422993,9.21382523867228,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.505754070234305,0.241011029883482,0.441175890929576,0,0.474541238222193,0.539325232640658,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58040879591855,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0,0,0.154209693802656,0.177561725313127,0.492762936082855,0,0.232420756919918,0,0,0.552485933615378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,1.25671933779759,0.308097234229289,0.307007349452259,0.689182862422653,2.36324538710202,0.580066775656914,1.10794615640931,1.78064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.12600539952579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11362469558097,0,0.270455678475983,0,0,0,0.439524537815682,3.15537356548735,1.00299045849731,0.568272293612826,0.95497793895076,0,0,0,0,0,0,0,0.19924798825107,0,3.02319297425131,0,0,0,0,0,0,0,0,0,0,0,0,2.08342208868187,0,0.724999575434793,0,0,5.43691668066254,0,0,11.285624670664,0,0,0,0.110579259931225,0,0,3.48603083260768,0,0.307801034015188,9.7990168028421,0.46112780877612,5.20594337576678,10.7560898202788,6.06102203490647,2.1983422416447,5.86338253620498,0,0,0,0,0,0,0,0,3.37596903244843,3.26465616318295,0,23.80275037163,0,0,0,0,0,0,0,0.802577647298789,0,0,5.86993856796269,0,0,0,0,0.063186579628488,0,0,0,0,0,0,7.9690672888342,3.46686682532847,1.04135843001079,0,0,0.873633341210151,0,0,0,0,0,0,0,0.959293472527256,3.17943378724783,0,2.15106521008283,12.7452524199939,0,4.39581141080687,0,0,1.71594997861965,0,0,0,2.8539883275459,3.24268823568233,0,0,0,0,0,0,0,0,0,0,1.19807400299395,0,0,0,0,1.16495949527454,0,0,0,3.24810688998671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.979762080328227,0,0.410462603746695,0,9.63152777921068,0,0,0.129282956361551,0,0,0,0,0,0,0,2.76656284657122,0,0.638341257770182,0,0.5013797880454,0,0,8.00975890876195,0,0,0,0,0,0.18628920882415,0,4.62427509459794,0,7.70756400571412,0.705797459094515,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796191777397232,0,0.343395705182793,0.673498977531838,0,0.385239660814607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.20741667462108,5.89854981008926,0,0,0,1.54993481694734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12345502025933,0,0,0,0,0,2.33152017882697,0,0,3.40478702825849,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,2.83847584520444,0,2.40083213212386,0,0,2.36387681767936,9.34343775893381,0.549451649953598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65664801022791,2.89725576181136,0,20.1614044318764,5.89392132762208,6.68877257284203,1.67783147696688,2.45375584038107,0,0.647428837187895,0.615976841137482,1.1598144313382,0.485710993059139,1.16969731731053,0,6.18384472043357,0,2.52863188514487,8.30295639616704,0,0,0,0,1.88541237681301,0,0,0,0,0,0,1.99882311849858,3.57107877211315,0,0,0,0,0,5.04868999018191,0,0,0,0,0,0,0,0,3.80095503034311,0,0,0,0,1.28823786971007,1.33982065078089,0,0,0.213233981900981,1.66645102024618,0,0,0,0.445530107947154,0.202117188958219,0.217716747896961,0,0.740872583160463,0.645499848534087,0,0,2.66818364694289,1.9307228228694,0,0,1.22241444182866,1.22068853494722,0,0,0 | |||
|short_description=p1@ENST00000511431 | |||
}} |
Revision as of 00:24, 22 January 2014
Short description: | p1@ENST00000511431 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000511431_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000511431_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 5.30e-16 | 6 |
stromal cell of endometrium | 5.30e-16 | 6 |
chorionic membrane mesenchymal stem cell | 1.01e-08 | 3 |
endodermal cell | 9.59e-08 | 58 |
epithelial cell | 8.00e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
embryonic uterus | 3.61e-14 | 22 |
uterus | 1.15e-12 | 21 |
internal female genitalia | 5.64e-12 | 22 |
female reproductive organ | 2.38e-10 | 37 |
female reproductive system | 2.38e-10 | 37 |
internal genitalia | 3.05e-10 | 25 |
reproductive organ | 1.34e-09 | 48 |
reproductive structure | 1.86e-09 | 59 |
reproductive system | 1.86e-09 | 59 |
female organism | 5.10e-09 | 41 |
egg chorion | 1.01e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.04e-28 | 143 |
carcinoma | 1.19e-25 | 106 |
disease of cellular proliferation | 1.91e-24 | 239 |
cancer | 5.05e-23 | 235 |
adenocarcinoma | 6.47e-23 | 25 |
female reproductive endometrioid cancer | 5.30e-16 | 6 |
organ system cancer | 2.18e-12 | 137 |
female reproductive organ cancer | 2.81e-11 | 27 |
reproductive organ cancer | 2.63e-10 | 29 |
disease of anatomical entity | 6.70e-08 | 39 |
mixed cell type cancer | 7.43e-07 | 2 |
carcinosarcoma | 7.43e-07 | 2 |
lung small cell carcinoma | 8.70e-07 | 4 |