FFCP PHASE1:Hg19::chr4:11430734..11430759,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9957 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=5194 | |||
|TSSclassifier=weak | |||
|UniProt=O14792 | |||
|association_with_transcript=-197bp_to_NM_005114,uc003gmq.2_5end | |||
|coexpression_cluster_id=C2771 | |||
|description=CAGE_peak_4_at_HS3ST1_5end | |||
|id=chr4:11430734..11430759,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000239;3.11e-09;3!CL:1000615;3.11e-09;3!CL:0002306;3.11e-09;3!CL:0000236;6.81e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.99e-09,3;CL:1000615,2.99e-09,3;CL:0002306,2.99e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;2.10e-08;14!DOID:4929;4.01e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.09e-08,14;DOID:4929,4.11e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.84e-12!115;UBERON:0000062!1.38e-10!511;UBERON:0000467!1.34e-08!625;UBERON:0000480!1.74e-08!626;UBERON:0004111!1.06e-07!241;UBERON:0002050!2.42e-07!605;UBERON:0005423!2.42e-07!605;UBERON:0000922!3.24e-07!612;UBERON:0000923!4.54e-07!604;UBERON:0005291!4.54e-07!604;UBERON:0006598!4.54e-07!604;UBERON:0002532!4.54e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0006853;3.11e-09;3!UBERON:0007685;3.11e-09;3!UBERON:0004134;3.11e-09;3!UBERON:0002394;5.10e-07;4!UBERON:0003928;5.10e-07;4!UBERON:0003127;7.50e-07;2!UBERON:0002294;8.26e-07;7!UBERON:0001173;8.26e-07;7!UBERON:0000058;8.34e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006853,2.99e-09,3;UBERON:0007685,2.99e-09,3;UBERON:0004134,2.99e-09,3;UBERON:0002294,1.24e-07,9;UBERON:0001173,1.24e-07,9;UBERON:0004912,1.24e-07,9;UBERON:0002394,1.44e-07,6;UBERON:0003928,1.44e-07,6;UBERON:0003127,6.87e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0.527533956456907,0,0,0.672325146451775,0,0,0,0,0,0,0,0.273748850145768,0,0.152826811495903,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,0,1.204823675113,1.47901604066715,0,0,0.293600439334847,0,0.200544447470142,0.217010870715852,0,0,0,0.145398238779565,0.755751887377619,0,0.464858073811369,0.822335776043652,0.619412741790207,0,0.512321413058201,0,0.344745680736619,0.645484683583826,0,1.50593871634084,2.45615535052061,0,0.612167784741805,1.60464513538047,0,0,0.199463657621632,0.426224750532694,0,0.56738522469114,0,0.502497330513487,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,1.75996244461323,1.63841583378639,0.889509253863555,2.56038133539904,0.800791974072025,2.29900975981793,2.64417949113945,0,0.569212969109448,0,1.52909291250092,1.32171328579026,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260118695119756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69490601792545,0.383587685530591,0,0,0,0,0,0.0945348171640679,0,0.263504357079378,0.916853528483988,0.364295288292542,0.370784442784429,1.9472843619281,0.696518949197069,2.79211717089617,1.19245312152671,0.571994910780128,0.371457501329565,0,0,0,0,0.419499436209906,0.275118041940067,0.417989933073621,0.516833518338658,0.35576626268671,0,0,0,0.24406205754817,0.367663080345869,0,0.17859945656816,0.22452937262617,0.563057402416611,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0.311211035399766,0.269421344139376,0.653847612453835,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567160915800105,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,0.818238361772504,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0.502644862058154,0.462942225792648,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0.297262324577456,2.81201501960331,0,0.425325291727159,1.25381931783988,1.74380363108377,0.766765358330422,0.492663237895943,7.74826219316389,0,0.720599767084807,0.25248486685276,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,1.50677127429638,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0.508189248444927,0,0,0.670065061337395,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553107505625109,0,0.195801157462741,0,0,0.431428401637234,0.106727557803444,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.601519410909855,1.01289087829486,0,0,0,0.902399225814824,0.231046011313244,1.56869953835371,0,0.73886140225013,0,0,0,0,0,0,4.58777291481069,6.64860807142979,1.34324852833307,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.510450849978337,0.30347334256665,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0.608731130888112,0,0.281695602532241,0,0,0.35667105148125,0,0,0,0,0,0.192444225451024,0,1.08890984861323,0,0.43050537267123,1.68471475667626,0.443430153536676,1.1486170010348,0,0,0,0,0,0,0,0,0,0,1.47024129588619,0,0,0,0,0,0.5745161103971,1.48171507906718,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12284324244932,0.73254089635947,0,0,0,0.47748896947538,0,0,0,0,0.222617410045812,0,0,0.597743964753209,0.828851746593443,0,0,0,0,7.18946809178615,1.25314822272926,0,0.690503839458535,0,0,0.969332746095218,0.0927680981618513,1.99613798001194,0,0.0874599999961957,0.724999575434793,0.455173793141999,3.0510438035132,0,0,0,0,0,0,0,0.663475559587348,0.886642856860642,0,0,0.41827123283581,0.153900517007594,0,0,0,0,2.23300811812344,0.274792780205587,0.533034776018635,0,0.941881538370149,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0.216388639742091,0,0.353830258013357,1.22206028986725,0,0,0,0.134802265961354,0.802577647298789,0,0,0.19566461893209,0,0.394584402849391,0,0.61214552326098,0.63186579628488,0,0,0,0,0,0,0.284609546029793,0,0.520679215005393,1.46988596121566,1.91530254476886,1.04836000945218,0,0,0.292357268344742,0.0821154570532092,0.678923115418936,0,0.451961481561065,0.137041924646751,0,0.126621591911757,0,0.320635281006135,7.25740182113799,0,0.144090417154106,0,0,0.576219191952599,0,0,0,0,0.101998217636322,0,0.600420288709789,0.136905378891993,1.27746588066972,0,0.262887354279314,0.279282401272254,0.229160424011684,0,0.199679000498991,0.429226048136571,0.446342914883745,0.134366944973453,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.674921674654501,0,0.0607495566580247,0,1.26089131678717,0.262272940674991,1.16160370171347,0,0.575745591958336,0.714695326373367,2.64836788146173,0,0,0,0,0,0,0,0,0,1.32506888912221,0.517131825446202,0.13223260174269,0,0.704815022316672,0.533937062838473,0.471612915298998,1.24271716604159,0.992332043623902,0,0,0,0,0,0,0,0.157054096250234,0.886068179966986,0.244052529803926,0.250381861413,0,0.221858103073705,0.18628920882415,0,4.37431427867373,0.151649117541648,0,0.235265819698172,0,0.144921028610825,0,0,0,0,0,0,0,0,0.15543720058278,0.295710299979268,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0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| |||
|short_description=p4@HS3ST1 | |||
}} |
Revision as of 00:13, 22 January 2014
Short description: | p4@HS3ST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HS3ST1_5end |
Coexpression cluster: | C2771_tubular_Mast_mucinous_smallcell_bile_gall_cerebellum |
Association with transcript: | -197bp_to_NM_005114, uc003gmq.2_5end |
EntrezGene: | HS3ST1 |
HGNC: | 5194 |
UniProt: | O14792 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.99e-09 | 3 |
kidney cortex tubule cell | 2.99e-09 | 3 |
epithelial cell of proximal tubule | 2.99e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
renal cortex tubule | 2.99e-09 | 3 |
region of nephron tubule | 2.99e-09 | 3 |
proximal tubule | 2.99e-09 | 3 |
biliary system | 1.24e-07 | 9 |
biliary tree | 1.24e-07 | 9 |
biliary bud | 1.24e-07 | 9 |
bile duct | 1.44e-07 | 6 |
digestive system duct | 1.44e-07 | 6 |
open tracheal system trachea | 6.87e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.09e-08 | 14 |
tubular adenocarcinoma | 4.11e-07 | 2 |