FFCP PHASE1:Hg19::chr4:8873716..8873738,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3166 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5017 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NP08 | |||
|association_with_transcript=-173bp_to_ENST00000400677,NM_018942,uc003izz.1_5end | |||
|description=CAGE_peak_2_at_HMX1_5end | |||
|id=chr4:8873716..8873738,- | |||
|ontology_enrichment_celltype=CL:0000064!7.94e-08!3;CL:0005012!7.94e-08!3;CL:0000067!7.94e-08!3;CL:0002304!7.94e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000064;1.29e-30;3!CL:0000067;1.29e-30;3!CL:0005012;1.29e-30;3!CL:0002304;1.29e-30;3!CL:0000333;9.98e-19;5!CL:0000313;1.78e-11;1!CL:0000342;4.22e-11;1!CL:0002565;4.22e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.35e-30,3;CL:0000067,1.35e-30,3;CL:0005012,1.35e-30,3;CL:0002304,1.35e-30,3;CL:0000313,1.97e-11,1;CL:0000342,6.00e-11,1;CL:0002565,6.00e-11,1;CL:0000133,1.51e-09,59;CL:0000221,1.06e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0003056;4.00e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;1.04e-15;6!DOID:2152;1.78e-11;1!DOID:171;1.19e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,8.27e-16,6;DOID:2152,1.97e-11,1;DOID:171,1.04e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0003075!6.96e-28!86;UBERON:0007284!6.96e-28!86;UBERON:0002346!4.04e-26!90;UBERON:0000073!3.41e-25!94;UBERON:0001016!3.41e-25!94;UBERON:0003056!5.51e-25!61;UBERON:0005743!9.57e-24!86;UBERON:0001017!1.03e-23!82;UBERON:0001049!1.21e-22!57;UBERON:0005068!1.21e-22!57;UBERON:0006241!1.21e-22!57;UBERON:0007135!1.21e-22!57;UBERON:0001893!1.06e-21!34;UBERON:0002780!8.73e-21!41;UBERON:0001890!8.73e-21!41;UBERON:0006240!8.73e-21!41;UBERON:0002791!2.72e-20!33;UBERON:0003080!3.87e-20!42;UBERON:0000955!4.67e-20!69;UBERON:0006238!4.67e-20!69;UBERON:0002616!7.16e-20!59;UBERON:0002020!8.67e-20!34;UBERON:0003528!8.67e-20!34;UBERON:0001869!5.37e-19!32;UBERON:0004121!1.38e-18!169;UBERON:0002619!2.76e-18!22;UBERON:0000924!7.82e-18!173;UBERON:0006601!7.82e-18!173;UBERON:0001950!1.23e-17!20;UBERON:0000033!6.65e-17!123;UBERON:0000153!1.65e-16!129;UBERON:0007811!1.65e-16!129;UBERON:0000956!1.15e-15!25;UBERON:0000203!1.15e-15!25;UBERON:0007023!6.86e-13!115;UBERON:0000488!8.60e-10!4;UBERON:0001871!1.88e-08!7;UBERON:0000200!3.85e-08!6;UBERON:0001778!7.94e-08!3;UBERON:0001775!7.94e-08!3;UBERON:0000064!1.48e-07!219;UBERON:0000970!1.53e-07!20;UBERON:0002104!4.35e-07!21;UBERON:0007625!8.71e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000488;6.49e-40;4!UBERON:0000970;5.17e-31;20!UBERON:0001778;1.29e-30;3!UBERON:0001775;1.29e-30;3!UBERON:0002104;1.69e-29;21!UBERON:0000020;7.35e-27;23!UBERON:0002203;9.55e-27;6!UBERON:0001768;9.55e-27;6!UBERON:0002200;9.55e-27;6!UBERON:0001032;1.05e-25;24!UBERON:0004456;1.05e-25;24!UBERON:0000019;4.99e-25;19!UBERON:0000047;4.99e-25;19!UBERON:0004088;4.99e-25;19!UBERON:0010230;4.99e-25;19!UBERON:0007625;1.02e-22;11!UBERON:0001456;1.37e-22;21!UBERON:0000013;9.98e-19;5!UBERON:0002410;9.98e-19;5!UBERON:0001801;7.59e-18;14!UBERON:0006876;9.92e-15;11!UBERON:0004911;1.78e-11;1!UBERON:0002506;4.22e-11;1!UBERON:0001769;4.22e-11;1!UBERON:0000010;1.16e-10;8!UBERON:0000966;7.70e-09;5!UBERON:0005388;7.70e-09;5!UBERON:0001802;7.70e-09;5!UBERON:0010371;5.35e-08;31!UBERON:0001444;1.89e-07;48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,9.72e-40,4;UBERON:0001778,1.35e-30,3;UBERON:0001775,1.35e-30,3;UBERON:0000970,1.79e-29,21;UBERON:0002104,1.79e-29,21;UBERON:0002203,1.25e-26,6;UBERON:0001768,1.25e-26,6;UBERON:0002200,1.25e-26,6;UBERON:0000020,1.10e-25,24;UBERON:0001032,1.10e-25,24;UBERON:0004456,1.10e-25,24;UBERON:0000019,1.04e-23,20;UBERON:0000047,1.04e-23,20;UBERON:0010312,1.04e-23,20;UBERON:0004088,1.04e-23,20;UBERON:0010230,1.04e-23,20;UBERON:0003072,1.04e-23,20;UBERON:0004128,1.04e-23,20;UBERON:0003071,1.04e-23,20;UBERON:0007625,1.22e-22,11;UBERON:0001456,1.68e-21,22;UBERON:0000013,7.61e-19,5;UBERON:0002410,7.61e-19,5;UBERON:0001801,8.74e-18,14;UBERON:0005085,4.46e-15,31;UBERON:0006876,1.14e-14,11;UBERON:0004911,1.97e-11,1;UBERON:0002506,6.00e-11,1;UBERON:0001769,6.00e-11,1;UBERON:0000010,9.96e-11,8;UBERON:0001444,2.74e-09,49;UBERON:0000033,4.86e-08,56;UBERON:0000966,1.57e-07,6;UBERON:0005388,1.57e-07,6;UBERON:0001802,1.57e-07,6;UBERON:0000153,3.42e-07,62;UBERON:0007811,3.42e-07,62;UBERON:0003056,3.42e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.06499713805492,3.54767035940102,1.66886092816939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0.348581828608555,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,1.02940686179115,0,0,0,0,0,0,0,7.18768510845476,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92495971052672,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,0,0,0.0874599999961957,0,0,0,0.709163045303809,0,0,4.34062487333231,0,0.482385754501632,0,0.331737779793674,0,0.438770794307945,0,0.278847488557207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.468528891450678,0,0,0.242780379534093,0,0,0.30607276163049,0.063186579628488,0.60129367765797,0.829505531177977,0.664653872707185,0,1.2557316736289,0,0,0,0,0,0.0870592065804026,0,0,0.0967563312890851,0,0,0,0,4.51961481561065,0,0,0.126621591911757,0.391102765469606,0,0,0,0,0.114536596165916,0,0,0,0,0,0,1.12198039399954,0,0,0.547621515567972,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0.681017030557878,0,0.137539436597234,0,0,0,0.425246896606173,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.625954653532499,0,0.332787154610557,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0.214441591374926,1.04397716786085,0,0,0,0,0,0,0.176689145945881,0,0,0,2.76344273384959,2.12701969324168,0.138258436151731,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,3.83683113910955,1.94084660514027,0,6.22494937694479,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.319267718114302,0.41023272848151,0.504143392443436,0.207471757392654,0,0,0,0.353909170043221,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0,0.413373593002368,0.19024743058172,0,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,0.328863867814245,0,0,0.078493092850514,0,0,0,0,0,1.78691360441641,2.52821778772363,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,3.46751838573156,0,0,0,0.102662806856247,0,0,0,0,0.951360726220549,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0.357107877211315,0,0,0,0,0.430018749454354,5.04868999018191,0.475940431336403,0,0,0,0,0,0,0.109265571963696,0,0.509944148709909,0.534434810531121,0.0918948995348449,0,0.151557396436479,0.267964130156178,0,0.20686599172379,0,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@HMX1 | |||
}} |
Revision as of 00:10, 22 January 2014
Short description: | p2@HMX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HMX1_5end |
Coexpression cluster: | NA |
Association with transcript: | -173bp_to_ENST00000400677, NM_018942, uc003izz.1_5end |
EntrezGene: | HMX1 |
HGNC: | 5017 |
UniProt: | Q9NP08 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.35e-30 | 3 |
ciliated epithelial cell | 1.35e-30 | 3 |
multi-ciliated epithelial cell | 1.35e-30 | 3 |
non-pigmented ciliary epithelial cell | 1.35e-30 | 3 |
serous secreting cell | 1.97e-11 | 1 |
pigment cell (sensu Vertebrata) | 6.00e-11 | 1 |
iris pigment epithelial cell | 6.00e-11 | 1 |
neurectodermal cell | 1.51e-09 | 59 |
ectodermal cell | 1.06e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 8.27e-16 | 6 |
ovary epithelial cancer | 1.97e-11 | 1 |
neuroectodermal tumor | 1.04e-09 | 10 |