FFCP PHASE1:Hg19::chr3:194090463..194090479,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=131578 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20818 | |||
|TSSclassifier=weak | |||
|UniProt=Q8TF66,B3KWI4 | |||
|association_with_transcript=0bp_to_ENST00000347624,NM_001135057,NM_130830,uc003ftt.2,uc003ftu.2_5end | |||
|coexpression_cluster_id=C2107 | |||
|description=CAGE_peak_1_at_LRRC15_5end | |||
|id=chr3:194090463..194090479,- | |||
|ontology_enrichment_celltype=CL:0000055!7.47e-32!180;CL:0000057!5.41e-18!75;CL:0000359!3.92e-11!32;CL:0000192!4.48e-10!42;CL:0000514!4.48e-10!42;CL:0002334!5.91e-09!12;CL:0000680!8.07e-09!57;CL:0000056!8.07e-09!57;CL:0000355!8.07e-09!57;CL:0000187!1.25e-08!54;CL:0002620!1.44e-08!23;CL:0000393!4.81e-08!60;CL:0000211!4.81e-08!60;CL:0000183!9.55e-08!59;CL:0002539!1.93e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.14e-14;32!CL:0002334;7.84e-12;12!CL:0002620;6.53e-11;23!CL:0002539;9.84e-10;10!CL:0000192;3.33e-08;43!CL:0000057;2.42e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.71e-20,76;CL:0000359,3.16e-15,32;CL:0002334,7.29e-12,12;CL:0002620,6.44e-11,23;CL:0000192,9.19e-11,43;CL:0000514,9.19e-11,43;CL:0002539,9.28e-10,10;CL:0000048,1.06e-07,427;CL:0000723,3.67e-07,433;CL:0000680,4.86e-07,58;CL:0000056,4.86e-07,58;CL:0000355,4.86e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;3.33e-08;43 | |||
|ontology_enrichment_disease=DOID:2394!4.76e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;9.06e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.18e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0004872!1.04e-10!84;UBERON:0002199!2.04e-10!45;UBERON:0002416!2.04e-10!45;UBERON:0001637!2.99e-10!42;UBERON:0003509!2.99e-10!42;UBERON:0004572!2.99e-10!42;UBERON:0000914!6.05e-10!83;UBERON:0002329!6.05e-10!83;UBERON:0003077!6.05e-10!83;UBERON:0003059!6.05e-10!83;UBERON:0007282!6.05e-10!83;UBERON:0009618!6.05e-10!83;UBERON:0007285!6.05e-10!83;UBERON:0004573!7.87e-10!33;UBERON:0004571!7.87e-10!33;UBERON:0004290!1.26e-09!70;UBERON:0002385!1.95e-09!63;UBERON:0001015!1.95e-09!63;UBERON:0000383!1.95e-09!63;UBERON:0001134!3.19e-09!61;UBERON:0002036!3.19e-09!61;UBERON:0003082!3.19e-09!61;UBERON:0003102!3.47e-09!95;UBERON:0002097!9.46e-09!40;UBERON:0000486!2.71e-08!82;UBERON:0001981!4.33e-08!60;UBERON:0007500!4.33e-08!60;UBERON:0004537!4.33e-08!60;UBERON:0006965!4.33e-08!60;UBERON:0000475!4.57e-08!365;UBERON:0004237!1.93e-07!10;UBERON:0004695!1.93e-07!10;UBERON:0002111!1.93e-07!10;UBERON:0004178!1.93e-07!10;UBERON:0000055!2.76e-07!69;UBERON:0004458!2.99e-07!49;UBERON:0000992!3.42e-07!13;UBERON:0000468!4.01e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.79e-13;33!UBERON:0004571;2.79e-13;33!UBERON:0001637;1.17e-10;42!UBERON:0003509;1.17e-10;42!UBERON:0004572;1.17e-10;42!UBERON:0004237;9.84e-10;10!UBERON:0004695;9.84e-10;10!UBERON:0002111;9.84e-10;10!UBERON:0004178;9.84e-10;10!UBERON:0002097;6.42e-09;41!UBERON:0002199;5.46e-08;46!UBERON:0002416;5.46e-08;46!UBERON:0000947;6.77e-08;21!UBERON:0010191;6.77e-08;21!UBERON:0000992;1.53e-07;13!UBERON:0003102;2.66e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,5.94e-16,42;UBERON:0003509,5.94e-16,42;UBERON:0004572,5.94e-16,42;UBERON:0004573,8.08e-15,33;UBERON:0004571,8.08e-15,33;UBERON:0002199,9.10e-13,46;UBERON:0002416,9.10e-13,46;UBERON:0007500,1.48e-11,59;UBERON:0001981,1.48e-11,59;UBERON:0004537,1.48e-11,59;UBERON:0006965,1.48e-11,59;UBERON:0004872,1.68e-11,83;UBERON:0002097,5.28e-11,41;UBERON:0000055,1.30e-10,68;UBERON:0004237,9.28e-10,10;UBERON:0004695,9.28e-10,10;UBERON:0002111,9.28e-10,10;UBERON:0004178,9.28e-10,10;UBERON:0007524,1.38e-08,73;UBERON:0002329,1.94e-08,71;UBERON:0003059,1.94e-08,71;UBERON:0007282,1.94e-08,71;UBERON:0004290,1.94e-08,71;UBERON:0009618,1.94e-08,71;UBERON:0002049,2.18e-08,78;UBERON:0007798,2.18e-08,78;UBERON:0003077,3.54e-08,72;UBERON:0007285,3.54e-08,72;UBERON:0004458,3.71e-08,49;UBERON:0000947,5.93e-08,21;UBERON:0010191,5.93e-08,21;UBERON:0003102,8.13e-08,99;UBERON:0001134,1.02e-07,62;UBERON:0002036,1.02e-07,62;UBERON:0003082,1.02e-07,62;UBERON:0000992,1.57e-07,13;UBERON:0002385,3.37e-07,64;UBERON:0001015,3.37e-07,64;UBERON:0000383,3.37e-07,64;UBERON:0000486,3.47e-07,83;UBERON:0002323,3.59e-07,46;UBERON:0001009,7.46e-07,112;UBERON:0007503,8.68e-07,78 | |||
|phase1_expression=6.17706489519893,33.8278827747753,4.22863212287913,18.0131937035635,1.34088328328186,3.48935409640147,5.06599756336621,1.26343974685366,0.261185628199839,0.491467873003018,0,0,0,0,0,22.1867298329086,19.2862248967673,27.0214733443328,34.1552959153355,0.861847406537515,0,5.01527554364941,1.43117993565528,3.96935832711364,0.627713197974014,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,9.75885711438329,1.50401373190767,2.17269778441236,285.507654991345,169.348934865317,0.472674085820339,0.221729397462564,0.614843499851882,1.44076983047484,0,0,0,0,0,0.476981248610684,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,8.86224497640123,1.52054421143703,0.732186172644509,0,0,0,0,0,0,0,0,0,0,0,11.4303548889923,5.31848148991235,9.40105183773854,105.555876435563,16.6694139633228,0.560677600142307,3.20246987189115,3.20667812942308,0.311211035399766,0.134710672069688,0.653847612453835,0,0,0.234321431833797,1.87296046098192,1.1409436430889,0.298897361103602,0,0,0,0.61246251376468,0.122834317311768,0.516628905878827,57.0241371495386,67.9984055516031,5.46096817162816,0,0,0.125118519871964,1.6623846929051,61.4568669233173,56.0872666312206,35.6064199608634,1.02088964844019,530.634542367654,99.731300578271,20.3454625113179,360.709497493452,51.1140545022657,58.2267620503122,42.6207600999341,688.269882879884,111.467933904411,979.695477841408,160.811172928097,0.323292113637624,300.693124861572,48.6632634439502,7.12154487704048,0,0.272746120590835,0,0.121973706129595,0.397589304964456,0.232387885739037,0.310983165046111,0,0.36497735907583,6.25798129319264,6.43240938192885,4.14404764057442,2.3218396401599,0.721879481669586,0,0.168584690078102,0,0,0.217879444092406,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,3.11980435583874,0,2.66639931442677,0.70445216541493,3.17606185074362,1.38895653772983,0.380508304469197,2.37061319387782,0.858486162094873,0,0,0,0.93733833986777,0.16798212819886,0,0.0895585227028483,0.290633938513962,0,0,0,1.03664057770386,0.288239906833923,1.38866676769018,0,0,0,1.71072446022705,0.102827492703324,0,0,0,0,0,9.69537868183333,0,0,0.26593811658487,0,2.05765899409714,0,0.532844358032199,0,0,0.823240336780769,0.65147236858747,0,0,0.301439377059586,0.871533458600294,0.099972991182057,0,0,0,0,0,0,3.4747513600219,0,2.68591444859843,0,0,0,0,0.76228387266739,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0.415941723061614,5.17444067511769,5.67728694122165,0.117141414992713,5.11608369537122,20.4666753650386,0,86.3493278096067,20.4649777081291,2.95404289191482,1.17480694477644,0,0,0,0,0,0,0.907170879989041,42.9226507526484,429.540063233287,248.664843667703,7.81648810459776,136.114128251743,5.46903331888265,5.93672265779964,39.4776816134798,31.2508636551104,29.5657761649713,16.0968873046923,22.893444556612,0,0,0,0.34444334449382,0,0.131124414959424,0,0,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0,0,0.261435451024901,17.4386085079145,3.60816110269676,5.20605431462885,3.50339439602256,183.871485355234,158.418239847529,30.4360735137971,13.6512651667669,1.6068392984416,0.773365746336976,0,0.15350367472613,0.551346289938122,0.322260734604821,0.145016693914229,0.340906509664404,0.712256285173899,0,0,0,0,3.71876439437829,140.091494339635,22.3051926451392,10.7811753061631,21.2922412126809,38.2770516513032,38.5474375736154,2.57624796135584,0,0,0,0,0,6.68226820644467,14.1290755235861,0,0.274537029736055,0.471249609382746,12.7374963391189,0,46.3384301862879,0.48763373908959,11.6982475023017,22.1865308189186,0,0.282810863907425,7.910568163417,106.413511304402,10.6150236038595,5.26141062304515,0.578775534266688,1.31178950409327,11.9717122407995,3.40805847909725,2.53526042279017,0.860468113224309,0,7.84676313258751,4.25713276884717,4.64436797654861,1.31717957183961,2.27683904259429,0.349934720244983,0.0962221127255121,0,0,3.38917682796405,0,0,0,0,0,0,0,0,0,0,0,0,0.961416640147258,0,0,0,0.577076851905779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80921266106924,0,0,0,0,0.296964680832639,0,0,0,22.0391235945354,0,0,1.79323189425963,3.59169090190492,0,3.1703291575668,0,24.5721274252828,0.269605053441981,0,0,3.25523238601881,0,0,0,0,0,0.260427761085233,2.97363999987065,0.724999575434793,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0.10893846351899,0.139423744278603,4.30921447621264,0,0.46112780877612,0.0897576444097721,0,9.8890359516895,0.366390373607449,5.86338253620498,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0.865554558968364,0,2.21143911258348,0.611030144933625,0,0,0,0.269604531922708,9.63093176758547,0,0,0,0,0,1.20990716048664,0,3.34888872030986,1.50323419414493,0.207376382794494,0,0,0.313932918407225,0,0,0.554698692052555,0,0,0.174118413160805,0.34945333648406,0.51595809741485,0.290268993867255,0,0,1.06687918137261,0,5.87549926029384,0,1.39100228192093,0,0,29.5786046728159,1.067264973696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| |||
|short_description=p1@LRRC15 | |||
}} |
Revision as of 23:24, 21 January 2014
Short description: | p1@LRRC15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LRRC15_5end |
Coexpression cluster: | C2107_Fibroblast_Preadipocyte_mesenchymal_Chondrocyte_glioblastoma_Saos2_Smooth |
Association with transcript: | 0bp_to_ENST00000347624, NM_001135057, NM_130830, uc003ftt.2, uc003ftu.2_5end |
EntrezGene: | LRRC15 |
HGNC: | 20818 |
UniProt: | Q8TF66B3KWI4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.71e-20 | 76 |
vascular associated smooth muscle cell | 3.16e-15 | 32 |
preadipocyte | 7.29e-12 | 12 |
skin fibroblast | 6.44e-11 | 23 |
smooth muscle cell | 9.19e-11 | 43 |
smooth muscle myoblast | 9.19e-11 | 43 |
aortic smooth muscle cell | 9.28e-10 | 10 |
multi fate stem cell | 1.06e-07 | 427 |
somatic stem cell | 3.67e-07 | 433 |
muscle precursor cell | 4.86e-07 | 58 |
myoblast | 4.86e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.86e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.18e-09 | 14 |