FFCP PHASE1:Hg19::chr3:185655763..185655783,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6434 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10781 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000485530_5end | |||
|coexpression_cluster_id=C613 | |||
|description=CAGE_peak_1_at_TRA2B_5end | |||
|id=chr3:185655763..185655783,- | |||
|ontology_enrichment_celltype=CL:0000037!6.84e-50!172;CL:0000566!6.84e-50!172;CL:0002032!1.40e-45!165;CL:0000837!1.40e-45!165;CL:0000988!2.06e-45!182;CL:0000738!4.10e-38!140;CL:0002031!3.92e-33!124;CL:0002087!2.00e-32!119;CL:0000763!1.71e-29!112;CL:0000049!1.71e-29!112;CL:0000860!2.18e-24!45;CL:0002057!2.03e-23!42;CL:0000766!9.37e-21!76;CL:0000557!2.56e-19!71;CL:0000839!6.68e-18!70;CL:0002009!1.78e-17!65;CL:0000063!8.47e-17!578;CL:0002194!1.71e-16!63;CL:0000576!1.71e-16!63;CL:0000040!1.71e-16!63;CL:0000559!1.71e-16!63;CL:0000134!1.39e-15!358;CL:0000219!4.53e-15!390;CL:0000012!1.21e-14!682;CL:0000542!4.22e-14!53;CL:0000051!4.22e-14!53;CL:0000838!7.75e-14!52;CL:0000548!1.80e-13!679;CL:0000004!1.80e-13!679;CL:0000255!1.80e-13!679;CL:0002320!3.63e-13!365;CL:0000003!6.99e-13!722;CL:0000034!1.36e-11!444;CL:0000723!2.88e-10!436;CL:0000048!4.63e-10!430;CL:0000084!5.76e-08!25;CL:0000827!5.76e-08!25;CL:0000144!5.09e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.36e-18;33!CL:0002057;6.36e-18;33!CL:0000473;1.47e-12;39!CL:0000234;1.47e-12;39!CL:0000576;2.74e-12;48!CL:0000766;1.43e-10;69!CL:0002087;1.52e-10;104!CL:0000763;7.62e-10;100!CL:0000988;5.52e-09;177!CL:0000542;7.52e-09;53!CL:0000738;1.48e-08;136!CL:0000084;5.77e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.75e-49,168;CL:0000988,3.29e-45,177;CL:0002032,3.52e-45,161;CL:0000837,3.52e-45,161;CL:0000738,9.02e-38,136;CL:0002031,8.05e-33,120;CL:0002087,3.96e-32,115;CL:0000763,3.35e-29,108;CL:0000049,3.35e-29,108;CL:0000860,2.03e-23,42;CL:0002057,2.03e-23,42;CL:0000766,1.53e-20,72;CL:0000473,3.62e-20,48;CL:0000234,3.62e-20,48;CL:0000557,4.13e-19,67;CL:0000839,1.13e-17,66;CL:0002009,2.84e-17,61;CL:0002194,2.78e-16,59;CL:0000576,2.78e-16,59;CL:0000040,2.78e-16,59;CL:0000559,2.78e-16,59;CL:0000134,7.74e-15,354;CL:0000219,2.50e-14,386;CL:0000542,4.22e-14,53;CL:0000051,4.22e-14,53;CL:0000838,7.75e-14,52;CL:0002320,1.75e-12,361;CL:0000034,1.09e-10,441;CL:0000723,1.99e-09,433;CL:0000048,3.12e-09,427;CL:0000084,5.76e-08,25;CL:0000827,5.76e-08,25 | |||
|ontology_enrichment_development_v019=CL:0002057;4.50e-17;42!CL:0000051;7.52e-09;53!CL:0000049;1.37e-08;108 | |||
|ontology_enrichment_disease=DOID:162!1.22e-19!235;DOID:14566!1.81e-18!239;DOID:2531!1.58e-12!51;DOID:0060083!1.58e-12!51;DOID:1240!5.09e-12!39;DOID:0050686!8.85e-10!137;DOID:8692!9.02e-10!31;DOID:0050687!7.35e-09!143;DOID:305!2.49e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:1240;8.83e-10;39!DOID:8692;1.53e-09;31!DOID:2531;2.95e-08;51!DOID:0060083;2.95e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.22e-19,235;DOID:14566,1.81e-18,239;DOID:2531,1.58e-12,51;DOID:0060083,1.58e-12,51;DOID:1240,5.09e-12,39;DOID:0050686,8.85e-10,137;DOID:8692,9.02e-10,31;DOID:0050687,7.35e-09,143;DOID:305,2.49e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0002371!2.85e-16!80;UBERON:0001474!1.42e-15!86;UBERON:0002390!2.01e-14!102;UBERON:0003061!2.01e-14!102;UBERON:0002384!2.02e-13!375;UBERON:0004765!1.37e-11!101;UBERON:0001434!1.37e-11!101;UBERON:0002193!3.56e-11!112;UBERON:0002405!2.92e-09!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.74e-16,76;UBERON:0001474,3.06e-15,82;UBERON:0002390,4.73e-14,98;UBERON:0003061,4.73e-14,98;UBERON:0002384,9.95e-13,371;UBERON:0002405,8.16e-12,93;UBERON:0004765,2.25e-11,90;UBERON:0002193,8.55e-11,108;UBERON:0001434,8.09e-10,100 | |||
|phase1_expression=28.7051839247479,27.1907665341549,25.6537015454667,17.0124607200322,23.241976910219,27.0424942471114,27.8629865985142,43.5886712664513,20.6336646277872,30.7167420626886,20.9340350391728,35.8243850293482,28.486833648673,22.0304108268883,23.8606110524099,28.2376561509746,36.1616716814386,35.0548843385939,38.54669110445,22.038669395745,26.7240905529971,12.5381888591235,40.6455101726101,70.7640777626811,66.5375989852455,80.6925564698365,99.7522161816841,93.3509866380236,187.634760056927,218.015098119217,137.786349751308,87.3450163254981,81.928009907684,56.5723635555185,59.4173428450913,57.7207083898931,180.564270190931,168.414604193691,255.894714971901,224.172229449475,23.735040269432,30.4460046057841,26.0151323310528,97.4168199823084,128.477820854195,135.119322081614,199.191684628172,237.243871388593,226.395357124321,295.172394522526,248.475885333228,268.407330923544,245.114179003736,260.775812167866,288.458416445948,126.687094512173,156.102317833088,210.116457956154,198.954530041087,194.482990408113,296.013089244956,187.025687205868,176.525336995144,203.735430754628,216.205882778295,285.394768019643,314.525235742765,257.278633222905,233.10286453383,226.962342716847,209.468227911146,240.117018663892,300.955730456281,136.470914957514,131.176853078432,95.6043423518194,89.5259190237566,99.5672799539187,134.205864892062,99.754460309437,120.742423059848,91.5147410360816,65.1186104506894,91.7512866920381,76.4977958322657,83.2123934004689,91.6906810312469,72.4188074342649,81.308519352538,101.129697980749,428.048152770305,331.78901199458,359.336834437715,111.023916006382,186.649351472851,106.143786164356,316.506020113157,457.464527840028,332.046420884207,51.9950000665009,141.776185985612,133.98572902293,159.757917294487,64.3952440796303,120.788422064683,98.3610491951278,116.445661418957,68.5288560532362,62.6886055238613,73.6681812624469,69.6402044820338,66.364906633327,122.929560861348,104.608463783078,125.442628565972,76.1438782927645,128.762085850246,131.265684174365,141.438007838902,80.9156152383206,70.9680964703496,73.1848074225248,71.8243318000976,57.3380017971794,56.2188269485556,60.6149765232683,79.6494157013415,278.822125879805,411.857901506601,311.372468348018,51.199441925932,80.4841031644363,44.112583836018,27.1079364288425,26.0695713530663,39.3982531573441,60.4417319758835,59.8560890472242,61.258561522316,62.9711488793682,69.1259763404902,25.082492957812,13.4789256668241,28.9211865371855,38.6211398449073,41.6170072145249,53.8479740101404,125.923049633221,146.430697159713,147.468628027837,71.7532290593805,102.367916817629,61.0967282829366,87.6227309982215,65.4419120487453,81.9851764981401,86.3149211797028,36.178346283706,28.8170672776235,29.7901345360556,39.4772730766964,53.9793195060144,33.6805639416474,73.9002791495196,51.0389427165509,89.9248263820683,94.5268658756175,107.543963861573,111.921145350095,74.9919871058822,94.7153016120206,83.0216629847199,147.356500376364,19.1881382942715,35.7819805220629,52.8049233641298,35.088432915503,48.1885522858007,74.480360261655,71.206055218073,70.4543371816053,33.7934541331509,40.7686456373694,61.9669091520565,77.6444039788929,18.6169636003266,46.6702498828799,34.2109290477343,55.5644936757971,61.0404849052561,68.5969443732767,86.5492255004547,94.5337995109888,87.9222049956076,35.9311341408612,73.577756069749,34.3041593503541,24.9480600029231,31.8974338769338,22.7540340484507,10.7792721272436,56.055925946704,84.8303564731917,50.9797972490897,65.8466431321257,64.0559493219951,42.0666564938471,69.4204960939329,89.694817844431,26.9082309911395,36.8761508017638,57.0173082560364,45.8583755111053,59.772605290586,32.9426835706914,45.4008333729006,40.4363571418974,77.4971686929431,30.744666146528,26.9948914887416,46.5062566196765,36.976020049544,50.6986171008358,41.1645617237822,34.9115034356268,45.8887352622406,75.0138292697012,88.7949447753951,74.8288992079698,61.4710056241147,77.4625012188179,88.6894982554267,51.6283456688393,32.8052878478371,52.4912701139426,31.1126511781426,25.9876613401051,85.2992028287274,88.0012082207691,105.803842118849,81.6175398219715,88.8948131897017,95.1455182635497,64.1797026842383,72.6019420963781,83.8748802143131,36.9077727312324,23.8411015465858,17.2861084759188,19.1111324801205,41.8291614912042,59.9524602173352,61.442150294866,199.099857836007,44.0298609984346,46.666444401199,22.1695576525424,61.8209642916908,90.1744882532329,57.6826013337639,33.8840637522738,38.4775870553444,85.1554917949112,29.0985316487443,24.6558257895225,38.8345744477289,53.7063194588868,58.4080247360217,56.8947166530678,38.6318772942693,35.4552488765852,36.5046653617211,51.2777509896112,42.1802252940496,38.6358894857377,50.613709715532,55.2576085076574,57.8361537642784,62.4913767039294,235.493027714261,38.1249719277269,150.105555651519,99.7310077645373,162.095284519472,35.685816592199,27.1211782146377,33.9930596909136,32.503764744314,64.8841478957971,71.4816477668524,36.8716098093446,49.113414943268,49.2634877781607,74.1450069649805,35.4204501176311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| |||
|short_description=p1@TRA2B | |||
}} |
Revision as of 23:04, 21 January 2014
Short description: | p1@TRA2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRA2B_5end |
Coexpression cluster: | C613_CD4_CD19_CD8_Natural_CD14_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000485530_5end |
EntrezGene: | TRA2B |
HGNC: | 10781 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.74e-16 | 76 |
bone element | 3.06e-15 | 82 |
hematopoietic system | 4.73e-14 | 98 |
blood island | 4.73e-14 | 98 |
connective tissue | 9.95e-13 | 371 |
immune system | 8.16e-12 | 93 |
skeletal element | 2.25e-11 | 90 |
hemolymphoid system | 8.55e-11 | 108 |
skeletal system | 8.09e-10 | 100 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.22e-19 | 235 |
disease of cellular proliferation | 1.81e-18 | 239 |
hematologic cancer | 1.58e-12 | 51 |
immune system cancer | 1.58e-12 | 51 |
leukemia | 5.09e-12 | 39 |
organ system cancer | 8.85e-10 | 137 |
myeloid leukemia | 9.02e-10 | 31 |
cell type cancer | 7.35e-09 | 143 |
carcinoma | 2.49e-08 | 106 |