FFCP PHASE1:Hg19::chr3:150264272..150264329,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27230 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10759 | |||
|TSSclassifier=strong | |||
|UniProt=C9JSB0,C9JUH5 | |||
|association_with_transcript=0bp_to_ENST00000487153,ENST00000491660_5end | |||
|description=CAGE_peak_1_at_SERP1_5end | |||
|id=chr3:150264272..150264329,- | |||
|ontology_enrichment_celltype=CL:0000055!4.96e-19!180;CL:0000680!3.29e-13!57;CL:0000056!3.29e-13!57;CL:0000355!3.29e-13!57;CL:0000187!4.37e-13!54;CL:0000192!6.98e-13!42;CL:0000514!6.98e-13!42;CL:0000183!1.33e-12!59;CL:0002321!1.95e-12!248;CL:0000220!2.01e-12!246;CL:0000393!2.30e-11!60;CL:0000211!2.30e-11!60;CL:0000057!3.60e-11!75;CL:0000359!2.31e-09!32;CL:0000548!9.53e-09!679;CL:0000004!9.53e-09!679;CL:0000255!9.53e-09!679;CL:0000012!5.60e-08!682;CL:0000222!5.18e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000192;3.27e-09;43!CL:0000359;7.36e-09;32!CL:0000187;4.87e-08;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,3.37e-13,58;CL:0000056,3.37e-13,58;CL:0000355,3.37e-13,58;CL:0000187,4.54e-13,55;CL:0000192,7.83e-13,43;CL:0000514,7.83e-13,43;CL:0002321,2.16e-12,250;CL:0000057,1.43e-11,76;CL:0000393,2.25e-11,61;CL:0000211,2.25e-11,61;CL:0000359,2.31e-09,32;CL:0000222,6.06e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;3.27e-09;43!CL:0000355;2.05e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!4.56e-24!216;UBERON:0005256!1.78e-22!143;UBERON:0003104!2.88e-19!238;UBERON:0009142!2.88e-19!238;UBERON:0000475!3.13e-15!365;UBERON:0000914!5.29e-14!83;UBERON:0002329!5.29e-14!83;UBERON:0003077!5.29e-14!83;UBERON:0003059!5.29e-14!83;UBERON:0007282!5.29e-14!83;UBERON:0009618!5.29e-14!83;UBERON:0007285!5.29e-14!83;UBERON:0000486!2.10e-13!82;UBERON:0004290!1.19e-12!70;UBERON:0000490!2.15e-12!138;UBERON:0000481!1.93e-11!347;UBERON:0009569!7.04e-11!113;UBERON:0001134!9.53e-11!61;UBERON:0002036!9.53e-11!61;UBERON:0003082!9.53e-11!61;UBERON:0004119!1.68e-10!169;UBERON:0000925!1.68e-10!169;UBERON:0006595!1.68e-10!169;UBERON:0002385!4.29e-10!63;UBERON:0001015!4.29e-10!63;UBERON:0000383!4.29e-10!63;UBERON:0005911!4.99e-10!82;UBERON:0000466!5.12e-10!126;UBERON:0003102!1.11e-09!95;UBERON:0003929!6.66e-09!54;UBERON:0001007!2.92e-08!155;UBERON:0001555!2.92e-08!155;UBERON:0007026!2.92e-08!155;UBERON:0003914!1.17e-07!118;UBERON:0002530!1.53e-07!59;UBERON:0000119!4.17e-07!312;UBERON:0000077!7.59e-07!130;UBERON:0005156!7.71e-07!59;UBERON:0000990!7.71e-07!59;UBERON:0000483!8.38e-07!309 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,2.36e-23,199;UBERON:0005256,1.38e-20,122;UBERON:0003104,1.69e-20,160;UBERON:0009142,1.69e-20,160;UBERON:0000490,2.81e-14,148;UBERON:0000486,2.00e-13,83;UBERON:0002329,1.15e-12,71;UBERON:0003059,1.15e-12,71;UBERON:0007282,1.15e-12,71;UBERON:0004290,1.15e-12,71;UBERON:0009618,1.15e-12,71;UBERON:0007524,1.43e-12,73;UBERON:0007503,1.47e-12,78;UBERON:0003077,3.42e-12,72;UBERON:0007285,3.42e-12,72;UBERON:0009569,7.32e-11,112;UBERON:0001134,9.22e-11,62;UBERON:0002036,9.22e-11,62;UBERON:0003082,9.22e-11,62;UBERON:0004119,1.39e-10,160;UBERON:0000925,1.39e-10,160;UBERON:0006595,1.39e-10,160;UBERON:0003102,2.81e-10,99;UBERON:0002385,4.09e-10,64;UBERON:0001015,4.09e-10,64;UBERON:0000383,4.09e-10,64;UBERON:0005911,4.99e-10,82;UBERON:0003929,6.66e-09,54;UBERON:0001007,2.92e-08,145;UBERON:0001555,2.92e-08,145;UBERON:0007026,2.92e-08,145;UBERON:0003914,1.31e-07,117;UBERON:0002530,1.53e-07,59;UBERON:0005177,3.20e-07,101;UBERON:0000119,5.49e-07,309;UBERON:0005156,7.71e-07,59;UBERON:0000990,7.71e-07,59 | |||
|phase1_expression=180.224952236392,164.215101824384,171.118646572509,141.103350677914,148.838044444287,181.446413012877,187.44190984455,201.518639623159,103.168323138936,199.044488566222,201.664537544032,165.36011870254,128.718285375485,97.5278861325167,99.4192127183747,155.30710883036,159.11135539833,158.47728961406,172.728210771839,92.2176724995141,103.224349769592,92.4691428360359,82.1497283066133,77.7446734413982,100.936282234221,64.0344340167832,63.545856234258,68.1635366176462,30.6824135942145,49.5139923545404,39.0136630756512,94.7003861213295,76.5063033696755,177.112170869891,45.8605827435386,60.706262272129,41.9848628248832,22.713811749807,26.4718670660587,21.7010870715852,44.335263899505,45.0212195766382,43.0151197949092,19.7741604740208,21.5389287902621,18.6789727114618,25.5671940596253,18.0913870729603,18.2726758828111,24.4538533473828,24.8475885333228,23.8847052187471,18.6162667597774,17.4280864567633,21.6682378550947,20.5184150101439,24.2886473551483,22.9217954133986,23.5684597125595,23.4278189765548,33.8848676673492,28.6970631162443,22.5393933112444,23.8685860298309,29.0209238628584,23.2627942123367,21.1759564658495,17.8386552332288,20.8593167368081,19.9813737128707,29.0591761264017,22.0966581592539,24.0511414455072,28.941974224736,22.9612643962247,29.1425517256643,25.0492847456684,29.8852016754598,21.0550518573175,35.3415802239148,30.0364182570626,26.8516306034012,66.8785728953026,54.6138611262131,47.1439904547684,56.328389378779,38.4380147554572,41.9569281166773,39.0016474943069,61.0594402902633,21.630092826159,36.9959429303691,29.8173117937679,33.0428321447565,25.2228853341691,55.5740418875413,69.8319683904107,71.1349480575988,70.5213141568317,82.2557557322136,107.554347989085,97.0568001756203,105.206433340272,116.980979729432,105.174308968517,107.887006662223,87.198844132335,101.832599181912,98.7150447979476,85.6721482985153,98.1042563139762,73.0303776052332,74.8847143968405,81.8674933954522,75.2655771395833,81.3561080568525,85.4581700732284,98.9647042989974,75.9059076058509,85.3755310388579,72.9213468319189,113.103793289357,61.7357988218868,69.6247164680036,83.7035867900717,75.5319434020414,90.3240796613151,82.860371465365,66.8600489458768,68.6467674404467,102.398883851864,130.786667642209,157.91026387676,149.997248239595,87.2327964506448,117.905066434111,159.05718941022,206.81981987862,76.1950626342387,112.195075116057,118.928299828493,71.9730019859931,154.82549752433,114.943177263173,70.751331816721,70.6966733435025,63.9527790095741,32.9117061541372,30.8877251821269,22.6589075811035,66.9829312825796,86.0234595106124,99.282183459772,66.7063371470331,84.3193866781911,86.1119471272411,85.4789413135555,70.0309417348881,87.5185006209307,81.3371089018149,47.5338594188793,98.8353737434066,45.3955427039595,76.1062576315948,116.660440494973,61.2596136028787,57.4795193922995,72.1839589898095,72.0588196089651,93.0280346376766,76.3951272189798,27.6738876615733,50.4114343392823,155.685576614885,164.49771601115,148.410959670887,95.9966560895836,69.4144622212129,138.320669057359,117.742296029884,200.688111971845,164.527254794246,124.484414159907,109.519776392656,99.5482989960964,198.58094507015,228.74184201856,220.027824491935,147.027396187081,135.772293527579,147.206950343524,145.9710818142,137.75387565728,154.355436565771,139.845607309602,153.174393687775,117.274761634494,140.184337159282,169.62511348509,253.935019980709,252.953585919316,176.75291965177,141.008571895704,147.675173553069,146.179547753319,153.856873491108,141.073537313294,180.016874674953,80.545946424299,171.913697998947,152.167105032565,81.0245959427886,113.666939749998,96.3575619770653,163.782833571799,75.7805731763285,124.524492596012,86.079917017243,154.827929516347,110.565902864067,102.952781829818,127.24990006151,145.313427610088,125.42629370298,141.282490466052,99.8079991953733,114.167388937301,105.758755120545,118.1692398983,111.9539394166,106.731719920391,107.303343568294,168.965494916201,174.961535188465,200.295635961097,123.057500928474,118.388234993812,70.8657732238665,64.2307669197567,70.8572427857437,71.9116702215209,69.0677837772927,66.6730439702181,74.4268821044108,67.8926269333697,65.02226952394,62.0050581884704,180.911888206445,211.54904182434,219.042979964458,282.663727652683,181.823035085361,203.822517805084,89.1755460817594,103.310288376215,130.048400206282,122.1520676598,196.703068200834,172.407187685947,120.457567151247,344.379378713013,201.747348344238,131.341521242999,66.3121916457439,187.97131947155,58.4684113432349,49.5394498456973,57.0762456703795,143.817200428588,145.084161394033,53.6753073270526,72.7753264583029,54.696267722252,174.344931215405,155.383468583945,137.8053945196,147.055094278077,121.484986298836,54.44034044146,191.153336303626,55.6466102963589,49.136763383163,62.6921797363782,52.5168523053741,62.35493219491,90.9132452828701,55.0922001887221,63.2968050284009,88.1231612467483,85.8981145433604,69.4558231292305,128.950746997165,154.329864366981,144.183069923988,175.550989999062,175.251658467422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| |||
|short_description=p1@SERP1 | |||
}} |
Revision as of 22:00, 21 January 2014
Short description: | p1@SERP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SERP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000487153, ENST00000491660_5end |
EntrezGene: | SERP1 |
HGNC: | 10759 |
UniProt: | C9JSB0C9JUH5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 3.37e-13 | 58 |
myoblast | 3.37e-13 | 58 |
multi-potent skeletal muscle stem cell | 3.37e-13 | 58 |
muscle cell | 4.54e-13 | 55 |
smooth muscle cell | 7.83e-13 | 43 |
smooth muscle myoblast | 7.83e-13 | 43 |
embryonic cell | 2.16e-12 | 250 |
fibroblast | 1.43e-11 | 76 |
electrically responsive cell | 2.25e-11 | 61 |
electrically active cell | 2.25e-11 | 61 |
vascular associated smooth muscle cell | 2.31e-09 | 32 |
mesodermal cell | 6.06e-07 | 121 |