FFCP PHASE1:Hg19::chr3:127348005..127348063,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50512 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17936 | |||
|TSSclassifier=strong | |||
|UniProt=C9J0Q6,Q9NZ53 | |||
|association_with_transcript=0bp_to_ENST00000302192,ENST00000342480,NM_015720,uc003ejq.2_5end | |||
|coexpression_cluster_id=C3396 | |||
|description=CAGE_peak_1_at_PODXL2_5end | |||
|id=chr3:127348005..127348063,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.38e-10!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.54e-11,253 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.25e-10;82 | |||
|ontology_enrichment_disease=DOID:0050687!3.18e-16!143;DOID:305!1.36e-14!106;DOID:162!4.23e-11!235;DOID:14566!7.84e-11!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.19e-17,143;DOID:305,1.04e-15,106;DOID:162,2.96e-13,235;DOID:14566,4.88e-13,239 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.76e-31!94;UBERON:0001016!2.76e-31!94;UBERON:0005743!6.52e-31!86;UBERON:0001017!1.12e-29!82;UBERON:0002346!1.89e-26!90;UBERON:0001049!2.97e-25!57;UBERON:0005068!2.97e-25!57;UBERON:0006241!2.97e-25!57;UBERON:0007135!2.97e-25!57;UBERON:0003075!6.11e-25!86;UBERON:0007284!6.11e-25!86;UBERON:0000955!3.43e-24!69;UBERON:0006238!3.43e-24!69;UBERON:0002616!7.92e-22!59;UBERON:0002780!8.20e-20!41;UBERON:0001890!8.20e-20!41;UBERON:0006240!8.20e-20!41;UBERON:0003056!2.55e-19!61;UBERON:0000924!6.52e-19!173;UBERON:0006601!6.52e-19!173;UBERON:0003080!7.88e-19!42;UBERON:0004121!1.20e-17!169;UBERON:0002020!6.26e-17!34;UBERON:0003528!6.26e-17!34;UBERON:0001893!8.20e-17!34;UBERON:0002791!3.43e-16!33;UBERON:0001869!4.02e-16!32;UBERON:0000033!7.61e-16!123;UBERON:0000153!1.06e-14!129;UBERON:0007811!1.06e-14!129;UBERON:0000956!3.83e-13!25;UBERON:0000203!3.83e-13!25;UBERON:0002619!6.06e-13!22;UBERON:0000119!8.72e-13!312;UBERON:0000483!8.96e-13!309;UBERON:0000025!3.47e-12!194;UBERON:0000064!3.87e-12!219;UBERON:0001950!5.51e-12!20;UBERON:0007023!1.02e-11!115;UBERON:0000481!1.49e-10!347;UBERON:0000477!1.48e-09!286;UBERON:0004111!7.30e-09!241;UBERON:0000063!7.91e-09!97;UBERON:0003076!1.32e-07!15;UBERON:0003057!1.32e-07!15;UBERON:0000475!1.92e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.90e-15;32!UBERON:0003528;6.28e-15;34!UBERON:0002020;6.28e-15;34!UBERON:0001893;6.54e-15;34!UBERON:0002791;1.00e-14;32!UBERON:0002780;1.08e-14;41!UBERON:0001890;1.08e-14;41!UBERON:0000073;1.34e-14;53!UBERON:0002616;1.34e-14;53!UBERON:0000956;1.95e-13;25!UBERON:0000203;1.95e-13;25!UBERON:0002619;3.10e-13;22!UBERON:0001950;3.01e-12;20!UBERON:0000955;4.33e-12;68!UBERON:0001017;1.08e-11;75!UBERON:0001016;1.94e-11;83!UBERON:0004732;8.71e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.58e-31,89;UBERON:0001017,2.96e-31,81;UBERON:0002346,9.02e-28,86;UBERON:0001049,1.03e-26,56;UBERON:0005068,1.03e-26,56;UBERON:0006241,1.03e-26,56;UBERON:0007135,1.03e-26,56;UBERON:0003075,3.17e-26,82;UBERON:0007284,3.17e-26,82;UBERON:0000955,1.24e-25,68;UBERON:0006238,1.24e-25,68;UBERON:0000073,3.24e-25,53;UBERON:0002616,3.24e-25,53;UBERON:0011216,3.36e-24,223;UBERON:0010371,8.13e-22,104;UBERON:0003056,8.47e-21,61;UBERON:0002780,3.67e-20,41;UBERON:0001890,3.67e-20,41;UBERON:0003080,3.67e-20,41;UBERON:0006240,3.67e-20,41;UBERON:0004121,2.82e-19,171;UBERON:0000924,2.82e-19,171;UBERON:0006601,2.82e-19,171;UBERON:0003528,3.18e-17,34;UBERON:0002020,3.18e-17,34;UBERON:0001893,4.19e-17,34;UBERON:0001869,2.12e-16,32;UBERON:0002791,4.24e-16,32;UBERON:0000956,2.30e-13,25;UBERON:0000203,2.30e-13,25;UBERON:0002619,3.68e-13,22;UBERON:0000119,6.21e-13,309;UBERON:0000483,6.37e-13,306;UBERON:0000025,1.75e-12,192;UBERON:0001950,3.48e-12,20;UBERON:0010314,1.33e-11,132;UBERON:0007023,3.30e-11,114;UBERON:0004111,5.14e-09,240;UBERON:0003076,1.01e-07,15;UBERON:0003057,1.01e-07,15;UBERON:0004732,9.35e-07,13 | |||
|phase1_expression=1.09007027562334,3.8538094300377,2.11431606143957,1.0007329835313,2.23480547213644,2.61701557230111,2.53299878168311,1.89515962028049,14.1040239227913,10.5665592695649,11.1648186875588,1.31064823278103,0.791300934685361,1.98026164736075,3.31397375727916,2.6893005858071,4.21886169616784,2.19093027116212,4.39139518911456,8.00286877499121,5.91602004608334,17.2400096812948,8.5870796139317,11.4974517061223,11.4243802031271,0,0,0,0.393364276848904,0.767658796194425,1.08371286321253,4.59710612239464,2.10844143144775,1.47901604066715,14.1764977061952,0,4.69760702935756,0.553995408531877,0.200544447470142,0.434021741431704,0.223915474239924,0.971680998056939,0,0.145398238779565,0.755751887377619,0.242584061187816,0,1.6446715520873,0.309706370895104,0,1.0246428261164,0.236482229888585,0,0.645484683583826,0,0.376484679085209,0.272906150057846,0.224723484445085,0.306083892370903,0.320929027076094,0,0,0.598390972864896,0.426224750532694,0,0,1.24564449799115,0.251248665256743,0.521482918420201,0.217188844705117,0.605399502633369,0,0,0.211255286311942,0.637812899895131,0,0.561643155732475,0.300353785683013,0,0,0.79566670879636,0.91332076882317,1.75996244461323,2.73069305631066,0.889509253863555,2.13365111283254,2.40237592221607,1.14950487990897,0.661044872784862,0,2.27685187643779,0.587237189370939,0.382273228125229,1.32171328579026,1.12101712596307,5.26768169550154,1.37696839079683,1.96505381374582,1.64481199199607,2.00623794468814,2.28145586643513,1.4203434172042,3.89653456815823,0.779873198196215,2.06224135232386,0.886135578334485,1.35401931882508,0.896639238079726,0.650296737799391,2.30213066445147,1.65810010671509,1.15921234294021,2.22429844743091,1.87278579662799,6.27213142829861,1.0197840842781,1.14966148080576,1.71813722741315,2.53019692019503,0.95569624297229,0,0,0.903450714466637,1.27986611154418,1.24930726552346,0.710331756132051,0.821127996921047,0.604820229674197,2.13952156626806,1.30341963494519,0,2.01210257911091,5.4980901592718,0.361439152384566,0.50133791063589,2.75208386025565,0.795285947051099,0.973269740605272,4.91581049253153,8.86917589850256,9.22265249777823,23.4452545140906,8.37879163072847,7.41568885568859,2.27183175558278,2.96020553408754,1.46253756570752,1.43094374583205,2.28797964312051,0.371457501329565,3.57772333260069,8.60234595106124,7.28995053375948,5.6530794192401,4.61449379830897,11.0047216776027,2.50793959844173,3.35941786920128,3.20189636418039,1.67360306382335,1.61131726843659,4.56163263431108,0.976248230192678,0.735326160691737,6.48113558305408,1.7859945656816,2.02076435363553,1.91439516821648,9.19899824795299,7.59412527654503,10.4424994040332,1.31780417436063,0,4.79703457356788,0.496971951695318,2.02608818663328,2.51577443545116,3.72887606973458,1.06400514659507,3.92474320099615,1.06748995729705,9.8667019366864,0.622422070799533,1.34710672069688,1.79808093424805,3.78393569112329,3.45705554687999,3.04617861383936,2.49728061464256,1.71141546463335,2.83952493048422,3.64046945795671,2.5899671098901,2.94946694074722,0.408308342509787,2.33385202892359,1.13658359293342,0,0.741800787835671,1.82032272387605,1.43723628363248,2.18836948140286,2.37725187756732,0.277064115484183,0.877955241761676,0.612975591598039,1.50238058906597,3.51639767796065,0.179389635688862,0.213557388818567,0.635795703478686,1.20036438433761,0.412210116953756,0.257640540045629,0.37223371266318,2.02531598689519,0.68205903612839,0.252433774244115,0.460249493211497,0.484938170456436,3.19508633264953,0.201504196455281,3.89989362314122,1.93260853163297,1.63647672354501,3.15485054927904,8.90408054746046,13.650566137113,11.2708124583433,10.5734276115678,10.5974757367764,13.1391849267299,0,0.643240938192885,0,2.78620756819187,2.88751792667834,38.3314032129094,40.9660796889787,48.6842280364634,38.7131844290703,37.2573849398015,49.115018155997,36.8089471277249,37.2820783738158,49.6323832460844,2.95262181849859,2.80483547606892,4.115740113314,1.47008711385542,0,0.982827216677626,0,0,35.2976818618736,11.1519076694042,4.2802611309364,1.1240175325762,2.41269533787914,3.42577247086559,0.977424915930974,0,15.8764476227801,19.4763080358129,9.39269553886573,2.7429625074604,3.24089858803628,0.761016608938393,12.6432703673484,12.8772924314231,0.246217006087397,1.17002132569619,0.594524649154913,1.87467667973554,1.34385702559088,1.41775097242386,1.07470227243418,3.77824120068151,4.21720947081732,0.492663237895943,0.880484340132261,0.414656231081544,0.288239906833923,1.13618190083742,13.7155451671085,14.5155601712146,12.8939191931052,11.9750712215894,6.88944201112268,3.60411669412701,4.28739648945867,2.46688385559794,4.3596006883328,3.0802080044799,3.87815147273333,3.57656445851882,3.381211010224,2.6593811658487,2.08014873822732,3.08648849114571,4.25547396069835,2.39779961114489,2.7165818795048,0,1.64648067356154,0.65147236858747,2.84313558994037,2.37585561880029,2.71295439353627,6.10073421020206,1.89948683245908,1.2162378064119,0,0,3.59437283237374,2.29723871668228,2.85273810081437,1.44781306667579,1.84928690295345,1.25342674267927,0,2.75843064282698,1.72502059887614,1.79680250791648,21.0898538104645,52.0559415430487,65.7295490861041,97.494466424591,66.9835689235821,0,0,0.414415513436035,3.43536176813592,2.00068208423871,2.17012018959788,1.45579603071565,1.07057393278297,1.26161932027148,1.28855556491985,0.300946099727719,4.5481500811197,4.1389228517002,1.32845119707087,1.29058417979192,0.173767228936166,4.50342662164303,4.46086450954113,0.82707210449155,0.647142602455851,1.921096040462,0.303127571446259,0,0.907170879989041,0.248107807818777,0.153461973288062,0.561320188866147,3.45975702990393,2.04682899626681,1.60853921143608,4.45254199334973,0.308419387605311,1.24293207719189,0.821271560138091,0.519254429183621,0.813472649219715,40.8504939619683,8.82228469334453,4.23572549105123,0.803701137152247,2.1850940160806,1.44236856455367,29.7791744518892,22.4114630973847,32.1583405362511,17.5367069583913,21.4269806652538,4.54933536283586,1.36074964221213,0.647747748306418,7.71136263451447,10.8378575017541,13.0439341202262,8.6657932835313,9.14183609821597,9.40273969833149,0.219259876645935,0.261435451024901,14.8741072567506,12.4645565365888,18.8719468905296,1.75169719801128,71.8820298823996,78.5490439243998,5.74265537996172,2.60024098414608,1.6068392984416,3.67348729510063,1.69453478826109,1.38153307253517,2.75673144969061,1.07420244868274,2.61030049045611,3.40906509664404,5.60901824574445,1.15699440752685,2.88285101047659,2.16941611240793,2.2254711788221,0,3.46293581513704,0.6970372701606,1.23213432070436,2.12922412126809,3.47973196830029,2.59453906745488,2.00374841438788,1.86079184679834,3.16379424718726,1.33441135746677,7.67693373934002,1.28381696410176,4.45484547096312,0.78494864019923,0.899362287916574,0,1.7671860351853,2.83055474202642,1.58510321173008,0.421258456238981,3.41343617362713,2.19342140668156,0,1.36499911407986,1.27264888758341,5.65040583101214,5.51365343546124,1.99031692572366,3.06915619677634,9.83918408253369,2.62357900818653,5.68149055495571,2.78841148289775,2.53526042279017,1.72093622644862,3.14396931241988,6.77674997814376,2.12856638442359,1.68886108238131,1.64647446479951,4.9331512589543,4.54915136318478,1.25088746543166,2.01090682660736,1.08890984861323,1.50630081242847,14.2066772981506,15.1624328100863,8.42517291719684,2.98640420269047,0.507447609232169,0,0,0.238231775457789,1.64544909234478,0,0.540031437238115,1.58625035258854,14.5280736733363,37.536714355271,7.59624669541198,23.782806416092,0,0,0,62.6679226299044,2.68107518185313,1.90506224451495,57.1334614883218,12.0742786588787,0,55.1513233121042,7.51903431270201,3.72441911163527,0,11.9061827242718,17.0338495076131,10.6486656874287,12.2896305723383,10.9601292867284,14.8495736123599,24.6189000206571,0,12.3087398947712,10.0068601036114,4.9960795199673,9.86909035614947,49.7793837485865,2.05111450980652,10.9224469574562,0,8.23994825738598,0.23874448473769,0.890894042497916,0.614321404198464,30.8185770807552,30.5252633610813,0,0,23.2237948940793,5.18044769452781,5.24939439509181,81.3742775569312,1.32949287252801,0,2.17727711363265,3.32512899245109,5.01259289091706,12.2777368854449,1.08507746200627,2.3948309234694,0,68.8226249727605,49.259860123943,197.617660021182,15.3652379040288,0,0.724999575434793,42.5587496587769,23.89984312752,18.9110145414349,43.0929216551831,51.3224119554528,27.2591242045269,18.6005691020906,26.893005813466,41.1970688056125,56.2848433049933,88.6642856860642,39.4893714877151,53.8156009783811,14.6394931492533,1.53900517007594,8.77353830021909,17.9839845422687,36.8006342080066,7.60531603454057,1.27600463892768,1.83195186803725,0.533034776018635,0,27.1575843563393,17.9508616452169,11.9565700127106,12.1558771276999,8.55890093576798,23.1499553923506,15.5757847400771,7.59593032300897,7.99840759979824,29.2600857868257,88.2865650147732,5.97157158647103,4.24596309616028,4.27721101453538,0,0,0,24.3318090060244,1.60515529459758,32.5627579558221,2.18945747058799,17.6098157038881,27.1914025078184,5.52418163989147,6.04953580243319,146.608852821005,3.28570214068137,18.4897805879826,26.1294242321063,13.9577313268509,24.4934047347869,11.9294508994746,8.36307008410712,7.6844577428044,0.416024019039416,8.85154665509168,0.293977192243133,34.388386599259,3.31980669659857,0,28.9301430554365,23.4616707846656,27.6729090269315,1.74580229679155,35.7437313100576,38.4167259326905,28.2306364772307,0.397429223405979,51.9148526838205,29.3327074102205,0.0801588202515337,11.526461715925,31.5699183139766,25.0717325848144,7.55941534695043,23.3369197092272,45.8094257602316,8.07641481175311,9.89914945390541,20.7933435292629,17.887086719409,0,7.51271533743949,19.2134492387133,22.4524821382869,8.94226116468806,2.57859264851974,3.15464825135177,6.7027776305341,2.97908551215189,1.43574604915363,7.18844401796368,0,0.89268582976749,1.2764859772478,0,41.9385418298834,19.9321451237276,19.6973901530988,19.1426064545885,20.374488673553,0,50.0994704579861,29.0113255017656,18.3258589250122,19.6681394334044,13.2940908169339,0.2249738915515,0,59.109318628258,0,6.06803946203826,16.9428319676044,5.59681783552854,21.1559060412757,0,5.00286728461357,0.662091970365432,3.30549098951175,11.9459912385817,11.2348793856165,6.85833456229759,4.7892076624995,17.1573368366118,0.681552087141687,35.5799967373195,0.439656701034247,2.65013777824443,50.0325041119201,46.6781084151696,1.71086837884329,7.04815022316672,0.747511887973863,1.57204305099666,3.31391244277756,5.95399226174341,13.2399793371623,13.6407710186603,2.55336503108073,3.26410682021684,4.0110383043632,3.06345576763462,2.95085367638824,16.3336260100244,31.8984544788115,45.8818756031381,33.4259784986355,16.6288666750121,27.6213338326762,48.4351942942791,40.9511959411243,44.3680448265478,18.501192340081,50.2418987039143,7.29324041064332,34.6567830297092,72.1706722481909,0.74627401443437,0.934853239388898,1.10961172300523,1.51522404220071,0,0.889811221596536,0.228840068396924,0.756154618816195,0.777186002913902,1.03498604992744,0.318593534327405,0.449803112163605,0.776314784381297,0,0.265841714557995,1.04349012362347,0.150257608997218,1.52322084867518,1.62748293281865,0.363697318405119,0.107410557042488,0.464033759878494,1.99047944349308,4.80033317595784,0.686791410365586,1.01024846629776,0,18.8767433799157,0.857766365499703,0,0.226705925512272,8.56633154998186,9.29999477124577,7.34264248434098,0,15.7884515696669,4.41722864864703,2.89371057406372,0.506827321959218,5.12483037175893,1.72715170865599,38.5902144345275,29.1725300280152,2.92290463259083,3.5873506884608,2.78061170234935,17.6909318377063,16.9583307040066,8.02986068762783,0.79994958341972,21.1249624794399,0,0,0,1.95831310807222,0.622077260032973,70.9813760735267,57.5784492858281,32.8685818478823,55.5877058397351,86.7333228065069,46.1287576620652,10.1627326692382,35.1946298323144,0.954013051960256,0,35.2251129245607,3.52675943690684,2.4499638188256,45.2173744679075,36.8411098446521,27.1377560397157,57.2274656231706,144.185010238823,81.0522998880634,45.536132068182,31.409272457014,0,36.9245234078427,0,0,0,0,35.2081713145806,5.71598495454355,9.27843316036192,14.8487662134288,4.7143205006656,14.9032444934188,7.68851648328635,71.4547645262615,33.5863582403954,35.5501289982037,59.5474457720785,108.847986994626,33.9919815451453,1.98484471355718,11.2557596390157,2.29972369751271,91.0693120993087,94.1594422212707,14.5671745016792,18.2129753081038,0.975726071789027,0,0.171488009437418,83.4668320955493,74.980961861648,23.9933496994455,5.89526430027966,4.70958557103084,49.1771796437086,8.40816489941367,13.6973808076424,0,5.7330202546446,25.3026966385363,63.9955127517543,2.20858708199438,16.3426775964425,0,0.828864656652147,0,0.691259661814092,24.9531868115761,0,0.0852134047591577,2.54032230114557,5.9567785821453,27.9185747097888,18.1552398405712,23.0422189503452,11.8761782674444,17.0685094975177,3.88457302312737,2.05325613712494,3.4794432940146,8.74279787506451,48.659408400118,58.0936263471195,13.4379702578652,35.3521236781945,31.1131662389564,142.206998639806,6.32828096485146,5.02686989159102,133.570112166672,1.96118657403124,64.8110504529471,34.1576732780005,23.7637120261669,61.285080499593,0.339854229375634,1.4097587696978,2.57831551894309,0,28.7471841155109,0,8.3451021356735,7.30336388246517,24.3126520204407,21.6442770558691,14.9882984083525,83.4935499544432,139.632220908921,6.87734892670021,0,0.462175628631418,1.29787968637137,14.8876381305393,10.1616981926237,5.44803554349179,16.726168077685,9.35260918429462,6.89211746511337,17.5495277504663,14.549510057902,22.7769510632752,29.8500998205161,22.2380941103075,5.11761556562354,6.90386851244847,2.26061184426021,1.73809200028402,0,3.30965223046457,5.2550469129137,5.22520194952707,5.13349951627922,6.66785324844416,8.53494244172849,9.31448998328838,0,10.9929166254047,0,0.269475606319761,2.34640942403454,2.44482888365733,5.2896503181046,0.665756774185513,4.22674966541155,4.16739039994203 | |||
|short_description=p1@PODXL2 | |||
}} |
Revision as of 21:09, 21 January 2014
Short description: | p1@PODXL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PODXL2_5end |
Coexpression cluster: | C3396_brain_occipital_duodenum_temporal_parietal_small_Neurons |
Association with transcript: | 0bp_to_ENST00000302192, ENST00000342480, NM_015720, uc003ejq.2_5end |
EntrezGene: | PODXL2 |
HGNC: | 17936 |
UniProt: | C9J0Q6Q9NZ53 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.54e-11 | 253 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.19e-17 | 143 |
carcinoma | 1.04e-15 | 106 |
cancer | 2.96e-13 | 235 |
disease of cellular proliferation | 4.88e-13 | 239 |