FFCP PHASE1:Hg19::chr3:112359654..112359671,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=151887 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30649 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=231bp_to_ENST00000475181_5end | |||
|coexpression_cluster_id=C333 | |||
|description=CAGE_peak_15_at_CCDC80_5end | |||
|id=chr3:112359654..112359671,- | |||
|ontology_enrichment_celltype=CL:0000055!1.97e-23!180;CL:0000057!7.70e-17!75;CL:0000680!1.57e-10!57;CL:0000056!1.57e-10!57;CL:0000355!1.57e-10!57;CL:0000187!1.44e-09!54;CL:0000136!9.08e-09!15;CL:0002620!9.25e-09!23;CL:0000183!8.99e-08!59;CL:0000192!1.17e-07!42;CL:0000514!1.17e-07!42;CL:0002334!1.78e-07!12;CL:0000393!2.23e-07!60;CL:0000211!2.23e-07!60;CL:0000222!6.75e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002334;3.13e-10;12!CL:0000136;3.22e-10;13!CL:0000134;3.07e-09;55!CL:0000048;1.27e-08;58!CL:0000723;4.66e-08;61!CL:0002620;7.82e-08;23!CL:0002320;1.79e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.44e-16,76;CL:0000048,2.81e-13,427;CL:0000723,1.63e-12,433;CL:0000136,2.73e-12,15;CL:0000034,1.52e-11,441;CL:0002334,4.91e-10,12;CL:0000680,6.00e-09,58;CL:0000056,6.00e-09,58;CL:0000355,6.00e-09,58;CL:0002620,6.65e-08,23;CL:0000187,8.42e-08,55;CL:0000192,8.47e-08,43;CL:0000514,8.47e-08,43;CL:0002320,1.75e-07,361 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!8.15e-15!83;UBERON:0002329!8.15e-15!83;UBERON:0003077!8.15e-15!83;UBERON:0003059!8.15e-15!83;UBERON:0007282!8.15e-15!83;UBERON:0009618!8.15e-15!83;UBERON:0007285!8.15e-15!83;UBERON:0004290!4.21e-12!70;UBERON:0002385!6.06e-11!63;UBERON:0001015!6.06e-11!63;UBERON:0000383!6.06e-11!63;UBERON:0001134!1.08e-10!61;UBERON:0002036!1.08e-10!61;UBERON:0003082!1.08e-10!61;UBERON:0004923!1.39e-10!57;UBERON:0000486!3.15e-10!82;UBERON:0005256!8.96e-10!143;UBERON:0004872!2.50e-09!84;UBERON:0000475!8.79e-09!365;UBERON:0000948!3.58e-08!24;UBERON:0005498!3.58e-08!24;UBERON:0004140!3.58e-08!24;UBERON:0009881!3.58e-08!24;UBERON:0004141!3.58e-08!24;UBERON:0003084!3.58e-08!24;UBERON:0007005!3.58e-08!24;UBERON:0004139!3.58e-08!24;UBERON:0004291!3.58e-08!24;UBERON:0002100!5.21e-08!216;UBERON:0007100!5.87e-08!27;UBERON:0002199!8.72e-07!45;UBERON:0002416!8.72e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.14e-08;9!UBERON:0000042;2.14e-08;9!UBERON:0002384;5.19e-08;198!UBERON:0003688;5.20e-08;6!UBERON:0002358;5.20e-08;6!UBERON:0003684;5.20e-08;6!UBERON:0001178;5.20e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002385,4.35e-09,64;UBERON:0001015,4.35e-09,64;UBERON:0000383,4.35e-09,64;UBERON:0001134,4.44e-09,62;UBERON:0002036,4.44e-09,62;UBERON:0003082,4.44e-09,62;UBERON:0007524,5.18e-09,73;UBERON:0002329,1.02e-08,71;UBERON:0003059,1.02e-08,71;UBERON:0007282,1.02e-08,71;UBERON:0004290,1.02e-08,71;UBERON:0009618,1.02e-08,71;UBERON:0003077,1.91e-08,72;UBERON:0007285,1.91e-08,72;UBERON:0002199,2.17e-08,46;UBERON:0002416,2.17e-08,46;UBERON:0002384,3.17e-08,371;UBERON:0003688,5.44e-08,6;UBERON:0002358,5.44e-08,6;UBERON:0003684,5.44e-08,6;UBERON:0001178,5.44e-08,6;UBERON:0004872,5.56e-08,83;UBERON:0000486,7.84e-08,83;UBERON:0004457,8.19e-08,12;UBERON:0000042,8.19e-08,12;UBERON:0004797,1.35e-07,7;UBERON:0002097,2.63e-07,41;UBERON:0007503,5.33e-07,78 | |||
|phase1_expression=11.2640595147745,7.70761886007539,16.9145284915165,14.0102617694383,10.2801051718276,7.85104671690332,0,2.52687949370732,1.82829939739887,0.245733936501509,0,1.96597234917155,0.791300934685361,2.10402800032079,1.65698687863958,1.34465029290355,1.20538905604795,0.730310090387373,1.46379839637152,1.35433163884467,0.612002073732759,0,0.286235987131057,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.3806866313962,0.670700859703636,3.58015173161885,1.44575660953827,2.00535164254356,3.33146993609895,2.3858578411533,3.89307896242109,0.567208902984407,1.33037638477538,0.790513071238134,0.72038491523742,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0.56530794192401,0,0.275118041940067,0,0,0,0.33472061276467,0.805658634218294,0,1.22031028774085,0,0,0.17859945656816,0,0.225222960966644,0,0,0,0,0,0.436094052142534,13.4182426957736,8.61087479319142,6.75286822147416,20.6522366939146,2.12801029319014,6.72813120170769,0,1.48000529050296,5.91300967259556,0.808264032418128,0.163461903113459,3.48122083583342,3.45705554687999,0.70296429550139,0.624320153660641,0.570471821544449,0.298897361103602,0.23486899728753,0.485618833104395,0.421352420106746,0.204154171254893,0.122834317311768,0.309977343527296,5.94001428641027,1.97813543422845,0,0,0.673344455816265,0.250237039743928,0.831192346452549,1.31693286264251,2.14541457059314,4.20666564938471,0.907457465280168,6.81680615617675,9.39652510801697,8.26534414522291,5.70173082560364,5.87399416659102,4.3798891807757,5.58350568994769,7.76371128309825,4.48210223741514,2.77677151668526,7.36399189138395,5.98090410229604,3.90510551768276,3.62707553619505,2.20428770003634,0.193260853163297,0,0,0,0.132529768321485,0,0,0,0,3.12899064659632,3.21620469096443,2.76269842704961,5.57241513638375,3.60939740834793,0.118306800039844,0,0,0.110293972732394,0,0,0.269662616320329,0,0,0,1.40241773803446,1.6462960453256,0,0,0,0,0,0,0.857839051492628,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,4.10930429825376,1.15493158208859,0.925971025153221,3.04406643575357,0,0,0,0,0,1.87467667973554,0.671928512795438,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0.253991577168676,0,0,0,0.205654985406647,0,0.857479297891735,1.34557301214433,2.1798003441664,1.83345714552375,4.39523833576444,3.57656445851882,0.845302752556,2.39344304926383,1.04007436911366,0.514414748524284,2.83698264046557,0.266422179016099,2.85955987316295,0.542621605391443,0.823240336780769,1.62868092146868,2.84313558994037,0.791951872933429,1.80863626235752,0.871533458600294,1.59956785891291,0,0,0,3.35474797688216,1.14861935834114,0,4.48822050669496,1.02738161275192,1.61154866915906,0,0,0,0,1.01637849688985,0,0,0.167516265334349,0,0,0,0,2.57652132610194,2.00068208423871,1.08506009479894,3.53550464602372,3.92543775353756,3.15404830067869,4.21709093973768,2.40756879782175,2.27407504055985,1.03473071292505,3.32112799267718,2.02806085395873,2.69339204851057,0.195801157462741,0,0,0,0,0,1.66435439510497,1.20956117331872,8.18755765801964,18.2619748212794,9.26178311629143,12.9420540748258,6.65219423786715,10.2946509531909,5.93672265779964,1.07946785661859,1.42049380250502,1.47828880824856,1.55776328755086,1.27831416305955,0.120859449591622,0.601519410909855,0.0920809889358963,4.01850568576124,0.546273504020151,4.58935452357984,0,0.0770153371044148,0,0,0,0,0,0.431831832204279,0,0,0,0,0.831076008928724,0,0,0,0.512900250232778,0.984043937099117,1.30151357865721,0.309123034943167,0.824125183365091,0.165018999841176,0,0,3.21367859688319,0.580024309752732,0.770243085573222,0.767518373630648,0.413509717453592,1.50388342815583,1.59518363305651,0.681813019328807,2.40386496246191,0.165284915360978,0,0.382838137483752,0,1.39453664789186,21.0924272376529,0,1.54016790088044,0.532306030317022,0,2.40921484835096,1.71749864090389,4.46590043231601,3.79655309662471,2.66882271493355,0.767693373934002,2.56763392820352,0.95460974377781,0,1.61885211824983,1.92175920815238,1.53156123049392,1.81964233415984,1.58510321173008,0.842516912477962,0,1.70599442741899,0,4.09499734223957,2.82810863907426,1.13008116620243,0,2.65375590096488,0.438450885253763,0.578775534266688,0,2.63783490051515,0.92947049429925,1.12678241012897,2.29458163526482,4.02821068153797,2.85336841185,1.41904425628239,3.79993743535795,8.89096210991735,0,0.349934720244983,0,0,0,0.470719003883896,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46508179271894,0,0,0.284136146806413,0.71623345421307,2.67268212749375,0.921482106297696,0,0.281338832821026,2.56010021552684,0,0,1.79323189425963,1.65770349318689,0,0.102268682502155,0,3.42143546427988,0.179736702294654,0,0,0.887790650732402,0,2.22273980289274,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0.482385754501632,0,0.221158519862449,0,0.658156191461918,0,0,4.15531395920504,1.48124672601102,0,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| |||
|short_description=p15@CCDC80 | |||
}} |
Revision as of 20:33, 21 January 2014
Short description: | p15@CCDC80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_CCDC80_5end |
Coexpression cluster: | C333_Fibroblast_Smooth_Preadipocyte_Adipocyte_Ewing_Placental_sacrococcigeal |
Association with transcript: | 231bp_to_ENST00000475181_5end |
EntrezGene: | CCDC80 |
HGNC: | 30649 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.44e-16 | 76 |
multi fate stem cell | 2.81e-13 | 427 |
somatic stem cell | 1.63e-12 | 433 |
fat cell | 2.73e-12 | 15 |
stem cell | 1.52e-11 | 441 |
preadipocyte | 4.91e-10 | 12 |
muscle precursor cell | 6.00e-09 | 58 |
myoblast | 6.00e-09 | 58 |
multi-potent skeletal muscle stem cell | 6.00e-09 | 58 |
skin fibroblast | 6.65e-08 | 23 |
muscle cell | 8.42e-08 | 55 |
smooth muscle cell | 8.47e-08 | 43 |
smooth muscle myoblast | 8.47e-08 | 43 |
connective tissue cell | 1.75e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
muscle tissue | 4.35e-09 | 64 |
musculature | 4.35e-09 | 64 |
musculature of body | 4.35e-09 | 64 |
skeletal muscle tissue | 4.44e-09 | 62 |
striated muscle tissue | 4.44e-09 | 62 |
myotome | 4.44e-09 | 62 |
dense mesenchyme tissue | 5.18e-09 | 73 |
somite | 1.02e-08 | 71 |
presomitic mesoderm | 1.02e-08 | 71 |
presumptive segmental plate | 1.02e-08 | 71 |
dermomyotome | 1.02e-08 | 71 |
trunk paraxial mesoderm | 1.02e-08 | 71 |
paraxial mesoderm | 1.91e-08 | 72 |
presumptive paraxial mesoderm | 1.91e-08 | 72 |
integument | 2.17e-08 | 46 |
integumental system | 2.17e-08 | 46 |
connective tissue | 3.17e-08 | 371 |
omentum | 5.44e-08 | 6 |
peritoneum | 5.44e-08 | 6 |
abdominal cavity | 5.44e-08 | 6 |
visceral peritoneum | 5.44e-08 | 6 |
splanchnic layer of lateral plate mesoderm | 5.56e-08 | 83 |
multilaminar epithelium | 7.84e-08 | 83 |
cavity lining | 8.19e-08 | 12 |
serous membrane | 8.19e-08 | 12 |
blood vessel layer | 1.35e-07 | 7 |
skin of body | 2.63e-07 | 41 |
epithelial vesicle | 5.33e-07 | 78 |