FFCP PHASE1:Hg19::chr3:109428561..109428563,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:109428561..109428563,- | |||
|id=chr3:109428561..109428563,- | |||
|ontology_enrichment_celltype=CL:0002076!2.46e-13!43;CL:0000223!2.40e-11!59;CL:0002166!9.72e-10!3;CL:0000066!4.80e-09!254;CL:0002368!3.48e-08!13;CL:1001319!7.97e-08!1;CL:1000600!7.97e-08!1;CL:0002336!1.54e-07!1;CL:0002261!1.54e-07!1;CL:0002170!1.54e-07!1;CL:0002251!1.56e-07!21;CL:0002327!2.00e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000083;2.94e-11;4!CL:0002327;3.60e-11;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000083,2.80e-11,4;CL:0002327,3.42e-11,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!1.12e-16!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.45e-26;14!DOID:4074;4.21e-21;2!DOID:4905;4.21e-21;2!DOID:3498;4.21e-21;2!DOID:1793;2.94e-11;4!DOID:170;6.13e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.76e-26,14;DOID:4074,3.81e-21,2;DOID:4905,3.81e-21,2;DOID:3498,3.81e-21,2;DOID:1793,2.80e-11,4;DOID:170,5.92e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0000344!9.07e-09!12;UBERON:0004645!7.97e-08!1;UBERON:0001256!7.97e-08!1;UBERON:0001259!7.97e-08!1;UBERON:0001708!1.65e-07!4;UBERON:0001704!1.65e-07!4;UBERON:0001911!2.00e-07!4;UBERON:0005333!2.00e-07!4;UBERON:0008425!2.00e-07!4;UBERON:0005311!2.00e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;3.60e-11;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,3.42e-11,4;UBERON:0005333,3.42e-11,4;UBERON:0008425,3.42e-11,4;UBERON:0005311,3.42e-11,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.818238361772504,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503946384596579,0.141775097242386,0.0895585227028483,1.16253575405585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.6557641036396,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455173793141999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0.296521128680622,0,0,0,0,0,0,3.91329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19170628885091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353909170043221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,1.05868461514708,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:109428561..109428563,- | |||
}} |
Revision as of 20:26, 21 January 2014
Short description: | p@chr3:109428561..109428563, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:109428561..109428563, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of pancreas | 2.80e-11 | 4 |
mammary gland epithelial cell | 3.42e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 3.42e-11 | 4 |
mammary bud | 3.42e-11 | 4 |
mammary ridge | 3.42e-11 | 4 |
mammary placode | 3.42e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.76e-26 | 14 |
pancreas adenocarcinoma | 3.81e-21 | 2 |
pancreatic carcinoma | 3.81e-21 | 2 |
pancreatic ductal adenocarcinoma | 3.81e-21 | 2 |
pancreatic cancer | 2.80e-11 | 4 |
endocrine gland cancer | 5.92e-08 | 6 |