FFCP PHASE1:Hg19::chr3:69812731..69812742,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4286 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7105 | |||
|TSSclassifier=strong | |||
|UniProt=E9PFN0,B4DJL2,O75030 | |||
|association_with_transcript=24bp_to_ENST00000472437,NM_001184967,uc011bgb.1_5end | |||
|coexpression_cluster_id=C276 | |||
|description=CAGE_peak_19_at_MITF_5end | |||
|id=chr3:69812731..69812742,+ | |||
|ontology_enrichment_celltype=CL:1000497!5.85e-21!18;CL:0002518!5.85e-21!18;CL:1000449!2.25e-13!16;CL:1000507!9.65e-13!12;CL:1000494!9.65e-13!12;CL:0000239!2.75e-09!3;CL:1000615!2.75e-09!3;CL:0002306!2.75e-09!3;CL:0002681!1.18e-07!13;CL:0002584!1.18e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:1000497;2.40e-10;17!CL:0002518;2.40e-10;17 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,2.35e-10,17;CL:0002518,2.35e-10,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;6.30e-21;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,6.96e-21,2 | |||
|ontology_enrichment_uberon=UBERON:0002113!1.18e-25!27;UBERON:0003918!1.18e-25!27;UBERON:0005095!1.18e-25!27;UBERON:0007687!1.18e-25!27;UBERON:0000489!2.51e-21!32;UBERON:0006554!7.91e-18!44;UBERON:0001008!2.22e-17!45;UBERON:0005172!2.86e-16!55;UBERON:0005173!2.86e-16!55;UBERON:0002417!2.04e-14!61;UBERON:0000916!2.04e-14!61;UBERON:0004211!2.25e-13!16;UBERON:0001285!2.25e-13!16;UBERON:0007684!2.25e-13!16;UBERON:0003220!2.25e-13!16;UBERON:0004208!2.25e-13!16;UBERON:0009773!9.65e-13!12;UBERON:0001231!9.65e-13!12;UBERON:0004810!9.65e-13!12;UBERON:0006555!1.48e-12!17;UBERON:0005103!1.48e-12!17;UBERON:0000083!1.48e-12!17;UBERON:0009201!1.48e-12!17;UBERON:0004819!1.48e-12!17;UBERON:0006553!1.48e-12!17;UBERON:0003074!1.48e-12!17;UBERON:0003060!1.48e-12!17;UBERON:0000080!7.92e-12!18;UBERON:0002120!7.92e-12!18;UBERON:0004875!7.92e-12!18;UBERON:0005721!7.92e-12!18;UBERON:0005754!7.92e-12!18;UBERON:0007297!7.92e-12!18;UBERON:0004876!1.37e-10!20;UBERON:0000995!3.34e-10!21;UBERON:0003887!4.65e-10!21;UBERON:0000002!8.21e-10!6;UBERON:0001560!8.21e-10!6;UBERON:0005795!1.03e-09!22;UBERON:0003975!1.03e-09!22;UBERON:0006853!2.75e-09!3;UBERON:0007685!2.75e-09!3;UBERON:0004134!2.75e-09!3;UBERON:0009569!4.50e-09!113;UBERON:0003103!8.48e-09!69;UBERON:0004175!1.78e-08!25;UBERON:0003100!2.11e-08!41;UBERON:0005177!2.18e-08!107;UBERON:0000058!5.14e-08!26;UBERON:0006834!7.50e-08!1;UBERON:0007029!9.10e-08!1;UBERON:0001225!1.18e-07!13;UBERON:0008987!1.18e-07!13;UBERON:0003134!2.52e-07!37;UBERON:0000474!2.52e-07!37;UBERON:0003064!2.85e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0006834;1.48e-40;1!UBERON:0002113;1.29e-07;24!UBERON:0011143;1.29e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,1.48e-40,1;UBERON:0002113,4.15e-07,26;UBERON:0003918,4.15e-07,26;UBERON:0011143,4.15e-07,26;UBERON:0005095,4.15e-07,26;UBERON:0007687,4.15e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,1.46139224653261,0.422206515571503,0,0,0.215915916102139,0,0,0,0.764628819135115,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0.278847488557207,0.384751292518985,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,1.26598838716816,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853828638089378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.681909645754975,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.7305969312719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,3.88669664193519,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2003459952916,0,0,0,0 | |||
|short_description=p19@MITF | |||
}} |
Revision as of 19:43, 21 January 2014
Short description: | p19@MITF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_MITF_5end |
Coexpression cluster: | C276_mesothelioma_kidney_renal_small_clear_cerebellum_Renal |
Association with transcript: | 24bp_to_ENST00000472437, NM_001184967, uc011bgb.1_5end |
EntrezGene: | MITF |
HGNC: | 7105 |
UniProt: | E9PFN0B4DJL2O75030 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 2.35e-10 | 17 |
kidney epithelial cell | 2.35e-10 | 17 |
Ontology term | p-value | n |
---|---|---|
uterus or analog | 1.48e-40 | 1 |
kidney | 4.15e-07 | 26 |
kidney mesenchyme | 4.15e-07 | 26 |
upper urinary tract | 4.15e-07 | 26 |
kidney rudiment | 4.15e-07 | 26 |
kidney field | 4.15e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 6.96e-21 | 2 |