FFCP PHASE1:Hg19::chr3:11645925..11645936,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9686 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28966 | |||
|TSSclassifier=not | |||
|UniProt=G5E9M9 | |||
|association_with_transcript=118bp_to_ENST00000413604,uc011aun.1_5end | |||
|description=CAGE_peak_30_at_VGLL4_5end | |||
|id=chr3:11645925..11645936,- | |||
|ontology_enrichment_celltype=CL:0000077!7.90e-12!19;CL:0002602!9.27e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000511;2.05e-29;1!CL:0002625;2.05e-29;1!CL:0002581;2.05e-29;1!CL:0000216;2.05e-29;1!CL:0000632;9.43e-11;3!CL:0000746;9.43e-11;3!CL:0000737;2.18e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,9.99e-30,1;CL:0002625,9.99e-30,1;CL:0000216,9.99e-30,1;CL:0002581,1.33e-29,1;CL:0000632,8.99e-11,3;CL:0000746,9.90e-11,3;CL:0000513,9.90e-11,3;CL:0000737,2.26e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.18e-12;10!UBERON:0005564;2.18e-12;10!CL:0000513;9.43e-11;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!1.76e-10!21;UBERON:0009196!1.76e-10!21;UBERON:0009117!1.76e-10!21;UBERON:0005564!1.76e-10!21;UBERON:0004176!6.36e-10!22;UBERON:0000992!8.36e-08!13;UBERON:0009568!9.27e-07!2;UBERON:0002216!9.27e-07!2;UBERON:0002209!9.27e-07!2;UBERON:0002213!9.27e-07!2;UBERON:0004267!9.27e-07!2;UBERON:0006444!9.27e-07!2;UBERON:0001995!9.27e-07!2;UBERON:0004715!9.27e-07!2;UBERON:0001468!9.27e-07!2;UBERON:0001130!9.27e-07!2;UBERON:0001066!9.27e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.76e-32;8!UBERON:0001136;2.05e-29;1!UBERON:0001343;2.05e-29;1!UBERON:0004910;2.05e-29;1!UBERON:0004813;2.05e-29;1!UBERON:0003135;7.14e-24;11!UBERON:0004909;1.91e-15;2!UBERON:0005406;1.91e-15;2!UBERON:0000991;6.85e-13;21!UBERON:0003101;2.44e-12;22!UBERON:0000079;2.44e-12;22!UBERON:0005904;2.18e-08;4!UBERON:0002107;6.38e-07;19!UBERON:0006925;6.38e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.59e-32,8;UBERON:0001136,9.99e-30,1;UBERON:0001343,9.99e-30,1;UBERON:0004910,9.99e-30,1;UBERON:0005154,9.99e-30,1;UBERON:0005295,9.99e-30,1;UBERON:0004813,9.99e-30,1;UBERON:0005297,9.99e-30,1;UBERON:0005294,9.99e-30,1;UBERON:0010141,9.99e-30,1;UBERON:0005891,9.99e-30,1;UBERON:0003135,6.61e-24,11;UBERON:0004909,1.33e-15,2;UBERON:0005406,1.54e-15,2;UBERON:0000991,6.58e-13,21;UBERON:0009196,6.58e-13,21;UBERON:0009117,6.58e-13,21;UBERON:0005564,6.58e-13,21;UBERON:0004176,2.35e-12,22;UBERON:0003101,2.35e-12,22;UBERON:0000079,2.35e-12,22;UBERON:0005904,1.82e-08,4;UBERON:0002107,6.77e-07,19;UBERON:0006925,6.77e-07,19;UBERON:0008836,6.77e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.12786256184353,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0,0.280660094433074,0.128139149255701,0,0.482561763430822,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,1.6068392984416,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0.533034776018635,0,0,0.332423363800313,0,0,0,0,0.317873157960757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0.228840068396924,0,0,0,0.477890301491107,0.449803112163605,0,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0.643324774124777,0,0,0.231522474323834,0,0,0.308801447160972,0.438568099157414,0.176689145945881,0.38582807654183,0,0,0.690860683462397,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,2.04602485189246,1.33982065078089,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p30@VGLL4 | |||
}} |
Revision as of 17:23, 21 January 2014
Short description: | p30@VGLL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_VGLL4_5end |
Coexpression cluster: | NA |
Association with transcript: | 118bp_to_ENST00000413604, uc011aun.1_5end |
EntrezGene: | VGLL4 |
HGNC: | 28966 |
UniProt: | G5E9M9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 9.99e-30 | 1 |
seminiferous tubule epithelial cell | 9.99e-30 | 1 |
Sertoli cell | 9.99e-30 | 1 |
perirenal preadipocyte | 1.33e-29 | 1 |
hepatic stellate cell | 8.99e-11 | 3 |
cardiac muscle cell | 9.90e-11 | 3 |
cardiac muscle myoblast | 9.90e-11 | 3 |
striated muscle cell | 2.26e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
testis | 1.59e-32 | 8 |
mesothelium | 9.99e-30 | 1 |
seminiferous tubule of testis | 9.99e-30 | 1 |
epithelium of male gonad | 9.99e-30 | 1 |
epithelial cord | 9.99e-30 | 1 |
sex cord | 9.99e-30 | 1 |
seminiferous tubule epithelium | 9.99e-30 | 1 |
testis sex cord | 9.99e-30 | 1 |
genital ridge | 9.99e-30 | 1 |
primitive sex cord of indifferent gonad | 9.99e-30 | 1 |
coelomic epithelium | 9.99e-30 | 1 |
male reproductive organ | 6.61e-24 | 11 |
epithelium of gonad | 1.33e-15 | 2 |
perirenal fat | 1.54e-15 | 2 |
gonad | 6.58e-13 | 21 |
indifferent external genitalia | 6.58e-13 | 21 |
indifferent gonad | 6.58e-13 | 21 |
gonad primordium | 6.58e-13 | 21 |
external genitalia | 2.35e-12 | 22 |
male organism | 2.35e-12 | 22 |
male reproductive system | 2.35e-12 | 22 |
duct of male reproductive system | 1.82e-08 | 4 |
liver | 6.77e-07 | 19 |
digestive gland | 6.77e-07 | 19 |
liver bud | 6.77e-07 | 19 |