FFCP PHASE1:Hg19::chr3:238509..238547,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10752 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1939 | |||
|TSSclassifier=strong | |||
|UniProt=C9JEY3 | |||
|association_with_transcript=43bp_to_ENST00000427688_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_CHL1_5end | |||
|id=chr3:238509..238547,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000236;3.79e-07;13!CL:0000945;5.65e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,5.85e-08,14;CL:0000945,5.15e-07,24;CL:0000826,5.15e-07,24 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.98e-15;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.00e-69!115;UBERON:0001049!3.61e-52!57;UBERON:0005068!3.61e-52!57;UBERON:0006241!3.61e-52!57;UBERON:0007135!3.61e-52!57;UBERON:0001017!5.26e-44!82;UBERON:0005743!2.46e-43!86;UBERON:0002616!4.33e-43!59;UBERON:0003075!9.98e-41!86;UBERON:0007284!9.98e-41!86;UBERON:0003080!3.76e-40!42;UBERON:0002780!2.53e-39!41;UBERON:0001890!2.53e-39!41;UBERON:0006240!2.53e-39!41;UBERON:0000073!5.02e-39!94;UBERON:0001016!5.02e-39!94;UBERON:0002346!1.05e-38!90;UBERON:0000955!5.83e-38!69;UBERON:0006238!5.83e-38!69;UBERON:0002020!1.29e-33!34;UBERON:0003528!1.29e-33!34;UBERON:0001893!1.40e-33!34;UBERON:0002791!1.54e-32!33;UBERON:0001869!5.38e-32!32;UBERON:0003056!1.12e-28!61;UBERON:0000956!2.18e-25!25;UBERON:0000203!2.18e-25!25;UBERON:0000153!2.56e-24!129;UBERON:0007811!2.56e-24!129;UBERON:0000033!2.88e-24!123;UBERON:0002619!9.70e-24!22;UBERON:0004121!1.14e-22!169;UBERON:0000924!5.02e-22!173;UBERON:0006601!5.02e-22!173;UBERON:0001950!8.75e-22!20;UBERON:0003076!9.16e-13!15;UBERON:0003057!9.16e-13!15;UBERON:0000025!3.30e-12!194;UBERON:0004732!9.67e-11!13;UBERON:0004111!2.32e-10!241;UBERON:0004733!3.95e-10!12;UBERON:0002028!3.95e-10!12;UBERON:0007277!3.95e-10!12;UBERON:0000475!8.39e-10!365;UBERON:0000064!8.40e-10!219;UBERON:0002420!9.72e-10!9;UBERON:0007245!9.72e-10!9;UBERON:0010009!9.72e-10!9;UBERON:0010011!9.72e-10!9;UBERON:0000454!9.72e-10!9;UBERON:0000477!1.31e-09!286;UBERON:0002308!1.35e-09!9;UBERON:0000125!1.35e-09!9;UBERON:0000481!3.81e-09!347;UBERON:0001871!8.28e-09!7;UBERON:0002298!2.30e-08!8;UBERON:0000483!3.96e-08!309;UBERON:0009663!8.39e-08!7;UBERON:0000119!8.63e-08!312;UBERON:0000200!1.21e-07!6;UBERON:0002680!1.23e-07!9;UBERON:0001895!1.23e-07!9;UBERON:0010092!1.23e-07!9;UBERON:0001894!4.36e-07!7;UBERON:0006222!4.36e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.61e-37;32!UBERON:0003528;2.23e-37;34!UBERON:0002020;2.23e-37;34!UBERON:0001893;2.58e-37;34!UBERON:0002791;2.82e-37;32!UBERON:0002780;2.49e-36;41!UBERON:0001890;2.49e-36;41!UBERON:0000073;1.15e-33;53!UBERON:0002616;1.15e-33;53!UBERON:0000956;9.07e-33;25!UBERON:0000203;9.07e-33;25!UBERON:0002619;1.63e-30;22!UBERON:0001950;5.90e-28;20!UBERON:0000955;1.65e-22;68!UBERON:0001017;3.45e-22;75!UBERON:0007023;2.43e-19;114!UBERON:0001016;3.51e-19;83!UBERON:0002420;3.21e-12;9!UBERON:0007245;3.21e-12;9!UBERON:0010009;3.21e-12;9!UBERON:0010011;3.21e-12;9!UBERON:0000454;3.21e-12;9!UBERON:0000125;4.94e-12;9!UBERON:0002308;4.94e-12;9!UBERON:0004732;2.01e-10;13!UBERON:0001871;8.69e-10;6!UBERON:0009663;1.04e-09;7!UBERON:0004733;1.13e-09;12!UBERON:0002028;1.13e-09;12!UBERON:0000200;1.76e-09;6!UBERON:0011216;2.02e-09;132!UBERON:0001894;9.49e-09;7!UBERON:0002298;2.18e-08;6!UBERON:0001872;4.50e-08;5!UBERON:0002021;5.69e-08;5!UBERON:0000349;5.93e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.62e-75,114;UBERON:0001049,9.36e-63,56;UBERON:0005068,9.36e-63,56;UBERON:0006241,9.36e-63,56;UBERON:0007135,9.36e-63,56;UBERON:0000073,5.14e-59,53;UBERON:0002616,5.14e-59,53;UBERON:0001017,1.22e-55,81;UBERON:0002780,9.15e-51,41;UBERON:0001890,9.15e-51,41;UBERON:0003080,9.15e-51,41;UBERON:0006240,9.15e-51,41;UBERON:0001016,1.84e-49,89;UBERON:0000955,2.89e-47,68;UBERON:0006238,2.89e-47,68;UBERON:0003075,6.74e-46,82;UBERON:0007284,6.74e-46,82;UBERON:0003528,2.57e-43,34;UBERON:0002020,2.57e-43,34;UBERON:0001893,2.85e-43,34;UBERON:0002346,9.48e-43,86;UBERON:0001869,3.35e-41,32;UBERON:0002791,6.87e-41,32;UBERON:0010371,1.59e-34,104;UBERON:0003056,8.89e-34,61;UBERON:0011216,2.73e-33,223;UBERON:0000956,1.39e-32,25;UBERON:0000203,1.39e-32,25;UBERON:0002619,1.97e-30,22;UBERON:0010314,4.22e-28,132;UBERON:0001950,6.99e-28,20;UBERON:0004121,7.68e-26,171;UBERON:0000924,7.68e-26,171;UBERON:0006601,7.68e-26,171;UBERON:0000025,4.06e-17,192;UBERON:0004111,9.28e-15,240;UBERON:0003076,5.71e-13,15;UBERON:0003057,5.71e-13,15;UBERON:0002420,3.39e-12,9;UBERON:0007245,3.39e-12,9;UBERON:0010009,3.39e-12,9;UBERON:0010011,3.39e-12,9;UBERON:0000454,3.39e-12,9;UBERON:0000125,5.21e-12,9;UBERON:0002308,5.21e-12,9;UBERON:0004732,1.86e-10,13;UBERON:0001871,1.02e-09,6;UBERON:0009663,1.11e-09,7;UBERON:0004733,1.16e-09,12;UBERON:0002028,1.16e-09,12;UBERON:0007277,1.16e-09,12;UBERON:0000200,1.78e-09,6;UBERON:0001894,9.37e-09,7;UBERON:0006222,9.37e-09,7;UBERON:0002298,2.15e-08,6;UBERON:0001872,4.62e-08,5;UBERON:0002021,5.52e-08,5;UBERON:0000349,6.00e-08,5;UBERON:0000483,4.93e-07,306;UBERON:0000119,8.81e-07,309 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.281908808191942,0,0.446961094427288,0,0,1.89515962028049,5.48489819219661,0,0,0,0,0.37129905888014,1.98838425436749,0,0,0,0,1.60057375499824,0.408001382488506,0.626909442956176,3.72106783270374,2.05311637609326,2.00868223351684,2.06316195519468,1.31360943119913,1.73163718890094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,1.09227722252426,1.77901850772711,2.56038133539904,3.2031678962881,1.72425731986345,1.98313461835459,1.90810750907073,1.70763890732835,4.11066032559657,1.14681968437569,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0.144846518960824,0,0,0.378139268656271,0,0.43917392846563,4.71524671791765,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55605517699883,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269662616320329,0,0,0,0,0,0,3.80265104465493,0.982827216677626,2.36315962672562,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,1.62302566965108,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0.12624243342638,0.888970520090367,2.29193055334967,2.34434894420094,0,6.68378702571603,0.300343057843917,10.861404439962,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0.904318131178758,1.74306691720059,0.399891964728228,0,0,0,0,0,0,0,0,0.716243852959582,0,0,0,0,30.7454495309181,14.3153839243384,6.95959931499926,17.4216915947723,9.56908127479745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0.106727557803444,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0,0.601519410909855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,1.03041011647722,0,0,0,0,0,0,0.308097234229289,0.15350367472613,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539617372749944,0.823611089208164,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31178950409327,0,0,0,0,0.0982490410131212,0,0,0,0.658589785919804,0,0,0,0,0,1.41215701165169,0,0,0,0,0.507447609232169,0.764637207142375,0,0.238231775457789,0,0.648473311192717,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80921266106924,0,0,0,0,0,0,39.7659059106519,21.8037595436295,0,0,0,2.78947183551498,2.21027132424918,0,0,0.123084805461069,0,0,0,0,3.15658898038188,0,0,27.1413168906661,33.7675877309139,15.9691038400955,0,0,9.42499448065232,0,0,0,2.41320361269025,0.583209226766509,0,23.0292760311598,21.4661660753226,16.7839909948792,12.7166148920908,10.0486190444206,56.162661671417,0,0,2.46240827212151,3.19037756371603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97630965539252,4.0690479671536,1.83309043480088,0,0,0,7.14452009595177,0.802577647298789,14.9929245264217,0,0,0,1.97292201424695,1.20990716048664,27.8526213083746,1.32691817219825,0,0,0,0,0,0,0,0,0,0,0,2.09672001890436,0,0,0,0,6.30428607174726,0,5.87549926029384,0,0,42.8614088621299,0,0,2.13452994739353,0,0,0,0,0,0,3.77110455386873,0,0,0,0,18.0126086612937,9.30956576465553,0,0.429765441419957,0,7.26134243307861,2.7499250881402,1.43574604915363,0.199679000498991,1.71690419254628,5.13294352116307,0.873385142327441,0,0,0,0,0,0,3.55627994676295,41.3519438700838,20.1581041045132,0,0,0,0.449947783103001,6.96421759102155,40.5807038475605,0,3.62506253576312,1.83591058472493,0,23.8452161312684,0,7.14695326373367,1.98627591109629,0,0,0,0,0,0,0,0,1.75862680413699,0,21.848819625102,17.3224708282924,0,0,4.48507132784318,3.93010762749165,0.828478110694391,0.992332043623902,0,0,0,3.26410682021684,2.7575888342497,6.43325711203269,15.4100136433608,35.3371716563027,53.1640907980192,55.3999242654913,32.1740691915705,13.7618206965617,13.9770604936434,11.9225093647456,0,0,9.85719264020711,13.1314053430685,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,3.80805212168795,0,0,0.214821114084977,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,29.5873053364704,0.389720617678777,1.0629187225069,1.14495775979091,0,0,0,0,0,0,0,0,0,0,0.76736622782191,0,0,0,0,0,0.247871528518004,0,0,0,0,0.705351887381368,10.718591707362,32.4999878988085,29.7562810283728,20.7524016774297,38.7669928415027,52.6829845103391,25.6573406642248,40.2074357623309,2.85538840518309,0,0,0,0,0,0,0,5.56556429784504,0,0,0,0,0,36.3352205246963,35.1485144376231,25.0091023766433,34.7518639862609,54.697480901822,2.74128883428591,1.98484471355718,0,0.255524855279191,10.1783348816874,8.07080933325178,3.64179362541979,4.55324382702595,0,2.53514772622714,1.20041606606193,20.6627988249568,27.1641554814567,0,0,2.43328587836593,25.9240723361403,0,5.47895232305697,0,0,4.36006919477604,0,0,0,3.20684545892101,0,0,0,6.02318302348389,0,0,0.846774100381858,0.68732060563215,0,0,0,0,0,1.29485767437579,0.821302454849976,0,0.971421986118279,11.9309126365674,0,0,39.7570208777139,0,4.98177383770023,1.85217979459067,1.09279780251979,0,3.43207650455468,0,20.6123890470693,16.9316448186439,19.8648191964198,0,1.69171052363736,0.966868319603658,0.499705779624645,0,0,0,2.19100916473955,1.83491713361816,9.03039373854143,0,29.1003578017115,37.0898086789321,2.1161073620616,0,0,0,0,0,0,0,0,0,0,1.51557396436479,1.07185652062471,22.387574865387,10.6535985737752,2.77204176471275,1.42838658878244,0,0.186224142887574,0,0.445530107947154,1.0105859447911,1.30630048738177,1.02669990325584,1.95320953742304,10.5431641927234,5.32256570473621,0,0,0,0,0,1.95586310692586,5.69654649642034,9.98635161278269,4.42802345900258,0 | |||
|short_description=p2@CHL1 | |||
}} |
Revision as of 16:54, 21 January 2014
Short description: | p2@CHL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CHL1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 43bp_to_ENST00000427688_5end |
EntrezGene: | CHL1 |
HGNC: | 1939 |
UniProt: | C9JEY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 5.85e-08 | 14 |
lymphocyte of B lineage | 5.15e-07 | 24 |
pro-B cell | 5.15e-07 | 24 |