FFCP PHASE1:Hg19::chr22:37420178..37420264,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4357 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7223 | |||
|TSSclassifier=strong | |||
|UniProt=E7ENL2 | |||
|association_with_transcript=0bp_to_ENST00000446076,uc003aqn.2,uc003aqo.2_5end | |||
|description=CAGE_peak_3_at_MPST_5end | |||
|id=chr22:37420178..37420264,+ | |||
|ontology_enrichment_celltype=CL:0000220!6.23e-13!246;CL:0002321!1.01e-12!248;CL:0000066!2.80e-12!254;CL:0002078!1.95e-08!44;CL:0000115!3.87e-08!35;CL:0000071!1.68e-07!18;CL:0002546!1.68e-07!18;CL:0002139!2.81e-07!24;CL:0000222!6.50e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000071;8.37e-08;18!CL:0002139;2.27e-07;24!CL:0000115;7.70e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,4.79e-12,250;CL:0000066,1.86e-10,253;CL:0002078,1.78e-08,45;CL:0000115,2.29e-08,36;CL:0000071,4.26e-08,18;CL:0002546,4.26e-08,18;CL:0002139,1.67e-07,24;CL:0000222,3.58e-07,121 | |||
|ontology_enrichment_development_v019=CL:0002546;8.37e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!4.27e-14!238;UBERON:0009142!4.27e-14!238;UBERON:0003914!2.24e-13!118;UBERON:0004119!9.69e-13!169;UBERON:0000925!9.69e-13!169;UBERON:0006595!9.69e-13!169;UBERON:0000481!1.73e-11!347;UBERON:0001007!3.42e-11!155;UBERON:0001555!3.42e-11!155;UBERON:0007026!3.42e-11!155;UBERON:0002100!4.19e-11!216;UBERON:0000490!6.04e-11!138;UBERON:0004921!8.62e-10!129;UBERON:0004185!8.62e-10!129;UBERON:0005256!1.04e-09!143;UBERON:0000468!5.39e-09!659;UBERON:0009569!8.37e-09!113;UBERON:0000077!9.29e-09!130;UBERON:0000922!2.08e-08!612;UBERON:0002050!2.36e-08!605;UBERON:0005423!2.36e-08!605;UBERON:0000466!2.48e-08!126;UBERON:0005177!3.32e-08!107;UBERON:0000923!3.35e-08!604;UBERON:0005291!3.35e-08!604;UBERON:0006598!3.35e-08!604;UBERON:0002532!3.35e-08!604;UBERON:0000926!1.04e-07!448;UBERON:0004120!1.04e-07!448;UBERON:0006603!1.04e-07!448;UBERON:0004872!1.49e-07!84;UBERON:0001986!1.68e-07!18;UBERON:0004638!1.68e-07!18;UBERON:0004852!1.68e-07!18;UBERON:0002365!3.24e-07!31;UBERON:0002330!3.24e-07!31;UBERON:0003103!3.52e-07!69;UBERON:0001041!4.19e-07!98;UBERON:0000055!4.84e-07!69;UBERON:0005172!5.59e-07!55;UBERON:0005173!5.59e-07!55;UBERON:0002049!6.22e-07!79;UBERON:0007798!6.22e-07!79;UBERON:0000480!6.80e-07!626;UBERON:0000467!8.63e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;8.37e-08;18!UBERON:0001986;8.37e-08;18!UBERON:0004852;8.37e-08;18!UBERON:0004921;3.54e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.92e-13,117;UBERON:0004119,1.55e-12,160;UBERON:0000925,1.55e-12,160;UBERON:0006595,1.55e-12,160;UBERON:0002100,4.49e-12,199;UBERON:0003104,2.82e-11,160;UBERON:0009142,2.82e-11,160;UBERON:0000490,2.83e-11,148;UBERON:0001007,2.06e-10,145;UBERON:0001555,2.06e-10,145;UBERON:0007026,2.06e-10,145;UBERON:0005177,1.95e-09,101;UBERON:0004921,6.10e-09,118;UBERON:0009569,1.95e-08,112;UBERON:0004872,3.70e-08,83;UBERON:0004638,4.26e-08,18;UBERON:0001986,4.26e-08,18;UBERON:0004852,4.26e-08,18;UBERON:0003103,5.95e-08,68;UBERON:0005256,6.62e-08,122;UBERON:0000055,2.71e-07,68;UBERON:0000487,4.75e-07,22;UBERON:0007500,6.32e-07,59;UBERON:0001981,6.32e-07,59;UBERON:0004537,6.32e-07,59;UBERON:0006965,6.32e-07,59;UBERON:0002049,6.38e-07,78;UBERON:0007798,6.38e-07,78;UBERON:0002365,9.68e-07,31;UBERON:0002330,9.68e-07,31 | |||
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| |||
|short_description=p3@MPST | |||
}} |
Revision as of 15:45, 21 January 2014
Short description: | p3@MPST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MPST_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000446076, uc003aqn.2, uc003aqo.2_5end |
EntrezGene: | MPST |
HGNC: | 7223 |
UniProt: | E7ENL2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 4.79e-12 | 250 |
epithelial cell | 1.86e-10 | 253 |
meso-epithelial cell | 1.78e-08 | 45 |
endothelial cell | 2.29e-08 | 36 |
blood vessel endothelial cell | 4.26e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.26e-08 | 18 |
endothelial cell of vascular tree | 1.67e-07 | 24 |
mesodermal cell | 3.58e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 1.92e-13 | 117 |
endoderm-derived structure | 1.55e-12 | 160 |
endoderm | 1.55e-12 | 160 |
presumptive endoderm | 1.55e-12 | 160 |
trunk | 4.49e-12 | 199 |
mesenchyme | 2.82e-11 | 160 |
entire embryonic mesenchyme | 2.82e-11 | 160 |
unilaminar epithelium | 2.83e-11 | 148 |
digestive system | 2.06e-10 | 145 |
digestive tract | 2.06e-10 | 145 |
primitive gut | 2.06e-10 | 145 |
trunk region element | 1.95e-09 | 101 |
subdivision of digestive tract | 6.10e-09 | 118 |
subdivision of trunk | 1.95e-08 | 112 |
splanchnic layer of lateral plate mesoderm | 3.70e-08 | 83 |
blood vessel endothelium | 4.26e-08 | 18 |
endothelium | 4.26e-08 | 18 |
cardiovascular system endothelium | 4.26e-08 | 18 |
compound organ | 5.95e-08 | 68 |
trunk mesenchyme | 6.62e-08 | 122 |
vessel | 2.71e-07 | 68 |
simple squamous epithelium | 4.75e-07 | 22 |
epithelial tube open at both ends | 6.32e-07 | 59 |
blood vessel | 6.32e-07 | 59 |
blood vasculature | 6.32e-07 | 59 |
vascular cord | 6.32e-07 | 59 |
vasculature | 6.38e-07 | 78 |
vascular system | 6.38e-07 | 78 |
exocrine gland | 9.68e-07 | 31 |
exocrine system | 9.68e-07 | 31 |