FFCP PHASE1:Hg19::chr22:31742554..31742565,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23598 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13071 | |||
|TSSclassifier=strong | |||
|UniProt=Q9HBE1 | |||
|association_with_transcript=-305bp_to_NM_014323,NM_032050,NM_032051,NM_032052,uc003akp.2,uc003akq.2,uc003akr.2,uc003aks.2_5end | |||
|description=CAGE_peak_4_at_PATZ1_5end | |||
|id=chr22:31742554..31742565,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.59e-18;5!CL:0000540;2.72e-15;6!CL:0000404;2.72e-15;6!CL:0002262;1.61e-12;2!CL:1000398;1.61e-12;2!CL:0002543;2.40e-09;6!CL:0002321;3.37e-09;15!CL:0000148;4.64e-09;10!CL:0000817;7.13e-07;1!CL:0000228;7.13e-07;1!CL:0002372;7.13e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.16e-17,5;CL:0000540,1.49e-15,6;CL:0000031,1.49e-15,6;CL:0000404,1.49e-15,6;CL:0002262,1.41e-12,2;CL:1000398,1.41e-12,2;CL:0000047,1.07e-11,8;CL:0002543,2.25e-09,6;CL:0000148,1.11e-08,10;CL:0000541,1.11e-08,10;CL:0000228,5.37e-07,1;CL:0002372,5.37e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000031;2.72e-15;6 | |||
|ontology_enrichment_disease=DOID:162!8.82e-09!235;DOID:14566!4.78e-08!239;DOID:2531!1.76e-07!51;DOID:0060083!1.76e-07!51;DOID:3095!9.04e-07!22;DOID:2994!9.04e-07!22 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:5093,8.27e-07,4;DOID:1612,8.27e-07,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;1.61e-12;2!UBERON:0003497;1.61e-12;2!UBERON:0003909;1.61e-12;2!UBERON:0003835;1.61e-12;2!UBERON:0002370;4.35e-12;2!UBERON:0005058;4.35e-12;2!UBERON:0009113;4.35e-12;2!UBERON:0001280;1.25e-08;3!UBERON:0004647;1.25e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,1.41e-12,2;UBERON:0003497,1.41e-12,2;UBERON:0003909,1.41e-12,2;UBERON:0003835,1.41e-12,2;UBERON:0001280,1.14e-08,3;UBERON:0004647,1.14e-08,3;UBERON:0005171,1.14e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0.123121058076788,0.612002073732759,0.313454721478088,0,0.547497700291537,0.376627918784408,0.305653622991805,0.738905305049512,0.550975469195755,0,0,0.154816123316076,0,0.30120591877825,0,1.23947520928483,0.853015394924529,0.880801318004542,0,0,0,0,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0.400395987036012,1.14950487990897,1.32208974556972,0,0.569212969109448,0,0,1.32171328579026,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0.260118695119756,0,0,0.289803085735052,0.14828656316206,0,0,0,0.383220493601921,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0.201606743224732,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0.189069634328136,0,0.263504357079378,0.130979075497713,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0.347140501607594,0,0,0.550236083880135,0.208994966536811,0,0.71153252537342,0.33472061276467,0.402829317109147,0.760272105718513,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0.225222960966644,7.66583187329416,2.84779697870439,1.28241220751285,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0.311211035399766,0.269421344139376,0.163461903113459,0.151357427644931,0,0.234321431833797,0,0,0,0.117434498643765,0.161872944368132,0,0,0,0.206651562351531,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0.257640540045629,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0.853815942907168,2.25300606146525,1.16193942869518,1.14027160516907,1.00928340350251,0.72995471815166,0,0,0,0,0,0.236613600079688,0,0,0.110293972732394,0.435758888184812,0,0.269662616320329,0,0,2.21446636387394,1.40241773803446,0,0,0,0,0,0.441463099414651,0.122988438543114,0.343135620597051,0,0,0,0,0,0,0,0.463721619900307,0.234817388471643,0.288732895522148,0,0,2.37061319387782,1.71697232418975,0,0,0.297262324577456,0,0,0,0,0,0,0,0.176096868026452,0.207328115540772,0.432359860250884,0.50496973370552,0.190493682876507,0.381988425558278,0,0,0.205654985406647,1.20137223137567,0.571652865261156,0.336393253036082,0.43596006883328,0.36669142910475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0.179060963239896,0.336255431980582,0.197030760201927,0,0,0.254094624222463,0,1.54657762555539,0.167516265334349,0.637938751653163,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0.725156697549733,0,0,0,0,0,0.451199612907412,0.231046011313244,1.56869953835371,1.46139224653261,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,1.00337954770971,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0.103041011647722,0.0915694648183434,0.41254749960294,0,0,0,0.290012154876366,0,0.15350367472613,0,0,0,0.0852266274161009,0.267096106940212,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0.372158369359667,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0.6196469961995,0.563391205064483,0.143411352204052,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.106824071127473,0,0,0.557409525377156,1.73123055571734,0.924843963529383,0.637705090915289,1.1974762285969,0,0.211673582723883,0.324621940274555,0.842391534340376,1.82587743226554,0,0,0.677167111206413,0.642352300414798,0,0,0,0.921722292925374,0.447352215784832,0.667396566847634,0.390776190804081,0,0,0.811367035427949,0.33307196799782,0,0.18714054040822,0,0,0,0,0,0,0,0,0.422008249231538,0.111308705022906,0.16480387422676,0,0,0.276283915531148,0,0.20453736500431,0,0,0,0.179021174675609,0,0,0,0,0,0.0927680981618513,0,0,0.787139999965761,0,0.1137934482855,0,0,0,0,0.173624994933292,0,0.241192877250816,0,0.110579259931225,0.295547618953547,0,0,0,0.153900517007594,0,0.46112780877612,0.179515288819544,0.217294743844016,0,0.0915975934018623,0,0,0.31396051279005,0.332423363800313,0,0,0,0,0.158936578980379,0,0,0.424059214301822,0,0,0,0,0,0.247127877893006,0,0.134802265961354,0,0,0.91227394607833,0,0.485560759068186,0.394584402849391,1.20990716048664,0,0.189559738885464,0.300646838828985,0.622129148383483,0,0,0,0,0.284609546029793,0.138674673013139,0,0.0979923974143777,0,0,0.171986032471617,0.19351266257817,0.0730893170861856,0.0821154570532092,0.0969890164884194,0.617792886840502,0.225980740780532,0,0.19871461170299,0.0633107959558787,0.586654148204409,0,0,0,0,0,0.514784993585894,0,0,0,0,0,0.101998217636322,0,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0,0,0,0.709048640765013,1.15382201733633,0.741438982396034,0.295282444544246,0.677386656526276,0,0.136203406111576,1.76828463311521,2.06309154895851,1.24632101408756,0,0,0,0,0,0.0524545881349981,0,0,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0.164185041498678,0,0,0,1.32506888912221,0,0.13223260174269,0,0,0,0,0,0,0,0.487170393523584,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.454947352624943,0.285465333544967,0,0.468334905806882,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0.3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| |||
|short_description=p4@PATZ1 | |||
}} |
Revision as of 15:24, 21 January 2014
Short description: | p4@PATZ1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PATZ1_5end |
Coexpression cluster: | NA |
Association with transcript: | -305bp_to_NM_014323, NM_032050, NM_032051, NM_032052, uc003akp.2, uc003akq.2, uc003akr.2, uc003aks.2_5end |
EntrezGene: | PATZ1 |
HGNC: | 13071 |
UniProt: | Q9HBE1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.16e-17 | 5 |
neuron | 1.49e-15 | 6 |
neuroblast | 1.49e-15 | 6 |
electrically signaling cell | 1.49e-15 | 6 |
endothelial cell of sinusoid | 1.41e-12 | 2 |
endothelial cell of hepatic sinusoid | 1.41e-12 | 2 |
neuronal stem cell | 1.07e-11 | 8 |
vein endothelial cell | 2.25e-09 | 6 |
melanocyte | 1.11e-08 | 10 |
melanoblast | 1.11e-08 | 10 |
multinucleate cell | 5.37e-07 | 1 |
myotube | 5.37e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 1.41e-12 | 2 |
abdomen blood vessel | 1.41e-12 | 2 |
sinusoid | 1.41e-12 | 2 |
abdominal segment blood vessel | 1.41e-12 | 2 |
liver parenchyma | 1.14e-08 | 3 |
liver lobule | 1.14e-08 | 3 |
hepatic duct | 1.14e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 8.27e-07 | 4 |
breast cancer | 8.27e-07 | 4 |