FFCP PHASE1:Hg19::chr22:19467408..19467480,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8318 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1739 | |||
|TSSclassifier=strong | |||
|UniProt=O75419,B4DDB4,E9PDH7,B4DDU3 | |||
|association_with_transcript=0bp_to_ENST00000263201,ENST00000404724,ENST00000437685,ENST00000483431,NM_001178010,NM_001178011,NM_003504,uc002zpr.2,uc002zps.2,uc002zpt.2,uc011agz.1,uc011aha.1_5end | |||
|coexpression_cluster_id=C281 | |||
|description=CAGE_peak_1_at_CDC45_5end | |||
|id=chr22:19467408..19467480,+ | |||
|ontology_enrichment_celltype=CL:0000012!5.89e-21!682;CL:0000548!1.19e-20!679;CL:0000004!1.19e-20!679;CL:0000255!1.19e-20!679;CL:0000066!4.98e-18!254;CL:0000003!2.76e-12!722;CL:0002321!3.36e-11!248;CL:0000220!7.16e-11!246;CL:0000063!5.07e-09!578;CL:0000144!1.15e-08!625;CL:0000333!1.78e-07!41;CL:0000055!9.41e-07!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.35e-18,253;CL:0002321,8.25e-11,250;CL:0000333,1.94e-07,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.31e-42!235;DOID:14566!4.80e-41!239;DOID:2531!1.44e-23!51;DOID:0060083!1.44e-23!51;DOID:0050686!1.67e-22!137;DOID:1240!3.82e-20!39;DOID:0050687!3.69e-18!143;DOID:8692!8.59e-16!31;DOID:305!1.65e-14!106 | |||
|ontology_enrichment_disease_v019=DOID:1240;2.11e-16;39!DOID:8692;1.77e-15;31!DOID:2531;7.43e-15;51!DOID:0060083;7.43e-15;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.41e-42,235;DOID:14566,5.27e-41,239;DOID:2531,6.46e-24,51;DOID:0060083,6.46e-24,51;DOID:0050686,1.72e-22,137;DOID:1240,1.95e-20,39;DOID:0050687,5.40e-18,143;DOID:8692,5.12e-16,31;DOID:305,2.25e-14,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=1.63510541343501,2.78330681058278,0.704772020479856,0,0,0.872338524100369,2.53299878168311,1.89515962028049,0,50.3754569828093,32.0988537267317,36.4797091457388,12.6608149549658,1.23766352960047,0.662794751455832,2.01697543935533,3.61616716814386,5.11217063271161,3.90346239032406,49.7409074630223,28.5600967741954,10.9709152517331,38.0693862884305,36.4085970693872,40.4247299495265,32.857764471619,36.7810640735757,37.8598858118797,0.393364276848904,1.91914699048606,0.77408061658038,34.0185853057203,23.1928557459253,15.1599144168383,61.3540228595989,48.7640467431856,39.3424588708695,0,0,0.217010870715852,0.447830948479849,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0.212604299965044,0,0,0,0.16072558669708,0.285012743741249,0,0,1.75996244461323,0.546138611262131,0.889509253863555,1.28019066769952,0.400395987036012,0.574752439954483,3.30522436392431,0,0,0.587237189370939,0.382273228125229,1.32171328579026,3.92355994087075,44.2485262422129,0.393419540227666,0.786021525498329,0.205601498999509,4.84840836632966,0,0,0,12.7007920849098,1.17842362989935,0.886135578334485,1.62482318259009,15.8833236459837,13.6562314937872,16.1149146511603,22.9370514762254,22.314837601599,0,0.267540828089713,0,27.0809329047183,0.383220493601921,0.68725489096526,0.506039384039006,0.318565414324097,1.30216690771284,0,0.301150238155546,0.383959833463255,1.24930726552346,0.236777252044017,1.64225599384209,0.604820229674197,0.534880391567015,0,0,14.75541891348,12.4026684988224,24.5778623621505,0.50133791063589,3.18662341713812,12.7245751528176,1.94653948121054,19.6632419701261,9.97782288581538,11.7698612828789,5.50112117090393,19.6719455677973,29.6627554227544,0.97364218096405,0.348259474598534,0.930705723632056,0.238490624305342,0,0.371457501329565,23.0564392545378,19.7853956874409,31.5897856462911,26.0041653285044,14.2629808311368,23.3850335649057,30.3042701478375,4.39308490587859,3.5576626268671,8.36801531911676,14.0990260988201,12.9246257972147,7.56592378399325,34.1926664721658,6.48113558305408,37.4165861510294,19.0849966732244,27.0267553159973,36.795992991812,37.021360723157,26.5642528699091,0,0,16.1354799292738,0.496971951695318,18.4880547030286,0.662045904066094,13.1944845544454,17.7334191099179,12.3349072031308,13.8773694448616,4.44001587150888,8.09148692039392,9.56445771694785,29.9135282697629,10.8977347904351,1.72852777344,34.6795719114019,5.30672130611545,29.6645347203114,4.93180645820944,48.7353169371624,49.3712480322801,58.0061831680286,6.32877930890169,26.0408752700948,2.06651562351531,3.56400857184616,5.43987244412825,30.0353249439549,9.3420358436111,38.043961753619,31.404748487863,14.9614622361459,14.4862614890677,8.58165828237255,4.35690370829131,31.8744434679659,40.7214473013717,1.70845911054854,8.05341224406335,31.2094739927778,11.8510408624205,5.41045134095821,2.79175284497385,33.2489374515295,12.8616846812782,25.4958111986556,4.41839513483037,4.52608959092673,14.2003837006646,16.3218399128777,25.2645282542627,7.15065156704198,15.5465288736776,6.88331028933609,19.2718455684761,31.9396741654779,21.960655202339,18.762650957782,28.2599352980704,33.5779170349764,6.25798129319264,3.85944562915731,34.5337303381201,0,0.721879481669586,51.2268444172524,52.7670079944458,53.7454596640165,47.316114302197,50.5480310294382,57.6567604439965,61.2134139047146,62.5946473749854,63.4832808961544,14.763109092493,14.0241773803446,13.1703683626048,5.88034845542168,1.26755034821831,0,1.18157981336281,162.016957485177,16.234473887691,22.1322475285098,2.08525542276389,12.3641928583382,28.6507571373148,12.4994400964015,10.4258657699304,35.3577826995057,14.4331342025273,8.81071077810584,1.29149563659404,15.3028434626738,28.7051017797499,15.0300780265333,23.7061319387783,32.6224741596052,4.18568910348575,7.02012795417713,12.3363864699644,8.43604505880993,4.03157107677263,17.0130116690864,44.6897028287213,43.5950907770943,33.7376757665386,2.95597942737566,7.66021375915067,0.829312462163088,0.144119953416961,0.37872730027914,81.7217899540216,19.0994212779139,19.926966025708,18.8179690624976,70.1283500236666,39.3449405775532,7.14566081576446,66.6058641011443,25.7216440611635,68.1312675276626,0.258543431515556,0,40.574532122688,1.86156681609409,8.32059495290929,50.1554379811177,48.2287048879146,41.8282821055276,3.86040582876998,1.08524321078289,28.8134117873269,51.1405809341164,4.6200953336531,65.7320054534746,0.301439377059586,0,3.39908170018994,1.2162378064119,2.51128545716063,4.21667878966063,10.0642439306465,1.14861935834114,18.5427976552934,7.96297186671686,10.6847687726199,18.6223401769491,39.0056301097475,1.18218456121156,1.07813787429759,1.15508732651774,20.0734753135746,10.4111883086097,14.6924874427762,15.2439801454257,22.3278563078607,0,0,0.414415513436035,0.36807447515742,2.00068208423871,2.98391526069709,1.24782516918484,4.10386674233472,1.41932173530541,5.15422225967938,0.300946099727719,0,2.0694614258501,33.2112799267718,16.2244868316699,13.11942578468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| |||
|short_description=p1@CDC45 | |||
}} |
Revision as of 14:35, 21 January 2014
Short description: | p1@CDC45 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CDC45_5end |
Coexpression cluster: | C281_Hodgkin_Reticulocytes_chronic_NK_acute_retinoblastoma_small |
Association with transcript: | 0bp_to_ENST00000263201, ENST00000404724, ENST00000437685, ENST00000483431, NM_001178010, NM_001178011, NM_003504, uc002zpr.2, uc002zps.2, uc002zpt.2, uc011agz.1, uc011aha.1_5end |
EntrezGene: | CDC45 |
HGNC: | 1739 |
UniProt: | O75419B4DDB4E9PDH7B4DDU3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.35e-18 | 253 |
embryonic cell | 8.25e-11 | 250 |
migratory neural crest cell | 1.94e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.41e-42 | 235 |
disease of cellular proliferation | 5.27e-41 | 239 |
hematologic cancer | 6.46e-24 | 51 |
immune system cancer | 6.46e-24 | 51 |
organ system cancer | 1.72e-22 | 137 |
leukemia | 1.95e-20 | 39 |
cell type cancer | 5.40e-18 | 143 |
myeloid leukemia | 5.12e-16 | 31 |
carcinoma | 2.25e-14 | 106 |