FFCP PHASE1:Hg19::chr21:27011685..27011704,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58494 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14686 | |||
|TSSclassifier=strong | |||
|UniProt=A8MQ45,P57087,A8MTB0,A8MXS1 | |||
|association_with_transcript=96bp_to_ENST00000312957,NM_021219,uc002ylp.1,uc002ylq.1,uc002ylr.1,uc010glh.1,uc010gli.1,uc011ace.1,uc011acf.1_5end | |||
|description=CAGE_peak_6_at_JAM2_5end | |||
|id=chr21:27011685..27011704,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.94e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.12e-43!115;UBERON:0000073!5.32e-37!94;UBERON:0001016!5.32e-37!94;UBERON:0001017!7.42e-37!82;UBERON:0005743!1.15e-36!86;UBERON:0001049!8.73e-36!57;UBERON:0005068!8.73e-36!57;UBERON:0006241!8.73e-36!57;UBERON:0007135!8.73e-36!57;UBERON:0003075!1.08e-32!86;UBERON:0007284!1.08e-32!86;UBERON:0002346!8.70e-31!90;UBERON:0000955!4.42e-30!69;UBERON:0006238!4.42e-30!69;UBERON:0002616!3.58e-29!59;UBERON:0003080!2.34e-27!42;UBERON:0004121!4.67e-27!169;UBERON:0002780!1.23e-26!41;UBERON:0001890!1.23e-26!41;UBERON:0006240!1.23e-26!41;UBERON:0000924!3.91e-26!173;UBERON:0006601!3.91e-26!173;UBERON:0003056!2.50e-24!61;UBERON:0002020!9.43e-24!34;UBERON:0003528!9.43e-24!34;UBERON:0000153!1.34e-23!129;UBERON:0007811!1.34e-23!129;UBERON:0000033!1.44e-23!123;UBERON:0001893!1.91e-23!34;UBERON:0002791!7.12e-23!33;UBERON:0001869!2.15e-22!32;UBERON:0000956!6.53e-18!25;UBERON:0000203!6.53e-18!25;UBERON:0002619!3.84e-16!22;UBERON:0000475!2.80e-15!365;UBERON:0001950!1.05e-14!20;UBERON:0000064!4.51e-11!219;UBERON:0000468!5.67e-11!659;UBERON:0000025!7.28e-10!194;UBERON:0003076!1.89e-09!15;UBERON:0003057!1.89e-09!15;UBERON:0000481!4.40e-09!347;UBERON:0004111!7.39e-09!241;UBERON:0000467!1.39e-08!625;UBERON:0000480!1.87e-08!626;UBERON:0000119!3.02e-08!312;UBERON:0000483!3.78e-08!309;UBERON:0004732!1.56e-07!13;UBERON:0000477!2.10e-07!286;UBERON:0000062!2.45e-07!511;UBERON:0002308!2.79e-07!9;UBERON:0000125!2.79e-07!9;UBERON:0000922!2.79e-07!612;UBERON:0002298!4.00e-07!8;UBERON:0004733!4.13e-07!12;UBERON:0002028!4.13e-07!12;UBERON:0007277!4.13e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;3.68e-30;34!UBERON:0002020;3.68e-30;34!UBERON:0001869;5.86e-30;32!UBERON:0001893;8.38e-30;34!UBERON:0002791;1.17e-29;32!UBERON:0002780;2.57e-27;41!UBERON:0001890;2.57e-27;41!UBERON:0000956;6.81e-26;25!UBERON:0000203;6.81e-26;25!UBERON:0000073;1.20e-25;53!UBERON:0002616;1.20e-25;53!UBERON:0002619;4.83e-23;22!UBERON:0001950;9.81e-21;20!UBERON:0000955;2.10e-17;68!UBERON:0001017;2.82e-17;75!UBERON:0001016;7.97e-16;83!UBERON:0007023;2.81e-14;114!UBERON:0000125;1.12e-10;9!UBERON:0002308;1.12e-10;9!UBERON:0002298;6.99e-09;6!UBERON:0004732;1.10e-08;13!UBERON:0009663;2.93e-08;7!UBERON:0004733;4.88e-08;12!UBERON:0002028;4.88e-08;12!UBERON:0000200;5.03e-08;6!UBERON:0002420;6.12e-08;9!UBERON:0007245;6.12e-08;9!UBERON:0010009;6.12e-08;9!UBERON:0010011;6.12e-08;9!UBERON:0000454;6.12e-08;9!UBERON:0011216;1.06e-07;132!UBERON:0002021;2.36e-07;5!UBERON:0001872;3.51e-07;5!UBERON:0010314;6.84e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.37e-53,114;UBERON:0001049,1.02e-48,56;UBERON:0005068,1.02e-48,56;UBERON:0006241,1.02e-48,56;UBERON:0007135,1.02e-48,56;UBERON:0001017,4.90e-45,81;UBERON:0000073,1.07e-44,53;UBERON:0002616,1.07e-44,53;UBERON:0001016,7.22e-43,89;UBERON:0003075,5.19e-41,82;UBERON:0007284,5.19e-41,82;UBERON:0000955,7.33e-39,68;UBERON:0006238,7.33e-39,68;UBERON:0002346,3.86e-38,86;UBERON:0002780,5.99e-38,41;UBERON:0001890,5.99e-38,41;UBERON:0003080,5.99e-38,41;UBERON:0006240,5.99e-38,41;UBERON:0003528,1.15e-35,34;UBERON:0002020,1.15e-35,34;UBERON:0001893,3.51e-35,34;UBERON:0001869,1.82e-33,32;UBERON:0002791,4.00e-33,32;UBERON:0010314,6.34e-33,132;UBERON:0010371,3.78e-32,104;UBERON:0004121,1.69e-28,171;UBERON:0000924,1.69e-28,171;UBERON:0006601,1.69e-28,171;UBERON:0003056,1.37e-27,61;UBERON:0000956,3.39e-26,25;UBERON:0000203,3.39e-26,25;UBERON:0002619,2.54e-23,22;UBERON:0001950,5.22e-21,20;UBERON:0011216,1.95e-20,223;UBERON:0000025,1.32e-12,192;UBERON:0003076,1.16e-11,15;UBERON:0003057,1.16e-11,15;UBERON:0004111,4.14e-11,240;UBERON:0000125,7.96e-11,9;UBERON:0002308,7.96e-11,9;UBERON:0002298,5.92e-09,6;UBERON:0004732,9.10e-09,13;UBERON:0009663,2.35e-08,7;UBERON:0004733,4.32e-08,12;UBERON:0002028,4.32e-08,12;UBERON:0007277,4.32e-08,12;UBERON:0000200,4.81e-08,6;UBERON:0002420,5.42e-08,9;UBERON:0007245,5.42e-08,9;UBERON:0010009,5.42e-08,9;UBERON:0010011,5.42e-08,9;UBERON:0000454,5.42e-08,9;UBERON:0002050,1.59e-07,564;UBERON:0002021,1.71e-07,5;UBERON:0000923,1.91e-07,560;UBERON:0010316,1.91e-07,560;UBERON:0005291,1.91e-07,560;UBERON:0006598,1.91e-07,560;UBERON:0010317,1.91e-07,560;UBERON:0002532,1.91e-07,560;UBERON:0000922,2.66e-07,592;UBERON:0005423,3.31e-07,581;UBERON:0000483,3.42e-07,306;UBERON:0001872,3.47e-07,5;UBERON:0000119,6.17e-07,309 | |||
|phase1_expression=0.54503513781167,1.2846031433459,1.83240725324762,2.00146596706261,1.78784437770915,2.61701557230111,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0.730310090387373,0,0.984968464614303,0.612002073732759,2.82109249330279,3.14859585844162,1.64249310087461,3.26410862946487,0.0764134057479513,0,0,0,0,0.154816123316076,0,0,0,0,0.142169232487422,0.587200878669695,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0.255725123687061,0,0,0.144846518960824,0,0,0.283604451492204,0.443458794925128,0.351339142772504,3.01251873644739,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0.56530794192401,0.419499436209906,0,0.208994966536811,0,0,0.33472061276467,0,0,0,0,0,0,0.44905874525234,0.225222960966644,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0.560677600142307,0,0,0,0,0.163461903113459,0.302714855289863,0,0.234321431833797,0,0,0.298897361103602,1.17434498643765,0.485618833104395,1.12360645361799,0,0.61417158655884,0.206651562351531,2.37600571456411,1.97813543422845,0,0,0.673344455816265,1.37630371859161,0.277064115484183,0,0,2.10333282469236,0,0.179389635688862,2.34913127700424,0.847727604638247,0,0.412210116953756,0.257640540045629,0.37223371266318,0.168776332241266,0.0974370051611986,0,0.368199594569197,0.484938170456436,0.355009592516614,0.10075209822764,0.339121184620975,0,0,0,0.609868530647977,0.265059536642971,0.580969714347592,0.725627385107593,0.252320850875628,0.72995471815166,3.12899064659632,4.5026865673502,0,2.78620756819187,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,1.73895607462615,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0.87192013766656,0,0,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0.179060963239896,0,0.197030760201927,0,0,3.30323011489202,2.60279707715243,0.773288812777695,1.67516265334349,2.55175500661265,0,0,0,0.12269149171914,0,0,2.07970861530807,0.535286966391485,4.41566762095017,3.16281820480326,1.20378439891088,0,1.03473071292505,0.664225598535437,0.184369168541703,0.347534457872331,0,3.0882908142977,0,0,0,0,0,0,0.496215615637554,1.99500565274481,0,1.28139149255701,2.04682899626681,0.64341568457443,0,0.154209693802656,0.710246901252508,0.164254312027618,0,0.232420756919918,0,0,0,0.114814448164607,0,0.131124414959424,0,0.15403067420883,0,0,0.211103257785751,1.13733384070897,0.680374821106063,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,0.618246069886334,0.0915694648183434,0.165018999841176,0,0,0,1.06337790121334,0.154048617114644,0.15350367472613,0.551346289938122,0.322260734604821,0.725083469571143,0.340906509664404,1.33548053470106,0,0,0,0,0,2.51849877464512,0,0,0,0,0.74129687641568,0.143124886741991,0,0,0,0.255897791311334,0,0.95460974377781,0.78494864019923,0.359744915166629,0.274537029736055,0.235624804691373,0,0,0,0,0.243713489631284,0,0,0.565621727814851,1.13008116620243,1.10273068709225,0.66343897524122,0,0,0.655894752046633,0.202910376962704,0.30982349809975,0,0.143411352204052,0.0982490410131212,1.07001315444375,0,0,0,0.75894634753143,1.04980416073495,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0.445773537109913,0,4.29740072527842,0.296964680832639,0,0.994147647766298,2.39138007897872,1.22439575525196,0,0,3.38721580026819,2.21027132424918,0,0.306806047506464,0.492339221844278,3.73247505194169,0,0,0,2.86065876347107,0,0,2.90799823828566,3.52518773015035,7.98455192004777,0.260427761085233,0,3.62499787717397,0.1137934482855,0,0,2.06846023944879,2.91604613383254,0.520874984799877,3.54296554325536,2.53252521113357,0,2.43274371848694,2.36438095162838,5.04586413454137,0,0,4.30921447621264,0,0,0,0,12.7600463892768,8.42697859297133,23.4535301448199,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,1.06149077404007,1.83309043480088,0.296521128680622,0,0.313265848516366,3.50485891499521,1.60515529459758,3.51396668588009,0,0,0,3.94584402849391,1.20990716048664,1.53036380815245,1.83241080922615,0.150323419414493,0,0,0,0.313932918407225,0,0,0,0,0,0,1.04836000945218,0,0,0,0,1.93978032976839,1.85337866052151,3.84167259326905,0,0,2.46912104227927,0,0,1.49417096317547,0,0,0,0,0,0,0,1.49494626680975,1.35983700206033,0,0.577901179803038,8.40588404193705,2.87501295673185,0,0,0.262887354279314,2.79282401272254,1.14580212005842,1.43574604915363,0.798716001995964,1.28767814440971,1.78537165953498,1.14211903227435,4.32359860250884,0,0,0,0,0,0,4.77137813885582,3.40508515278939,0.160753148465019,0.412618309791701,0.415440338029185,0,0,2.67298049295309,0,0.394028536495991,0.419636705079985,0,0,0,3.57347663186684,1.32418394073086,3.051222451857,1.08599920350743,0,0.326587360109409,1.19730191562487,0.164185041498678,0.17038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| |||
|short_description=p6@JAM2 | |||
}} |
Revision as of 13:09, 21 January 2014
Short description: | p6@JAM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_JAM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 96bp_to_ENST00000312957, NM_021219, uc002ylp.1, uc002ylq.1, uc002ylr.1, uc010glh.1, uc010gli.1, uc011ace.1, uc011acf.1_5end |
EntrezGene: | JAM2 |
HGNC: | 14686 |
UniProt: | A8MQ45P57087A8MTB0A8MXS1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data