FFCP PHASE1:Hg19::chr20:61992711..61992734,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1137 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1958 | |||
|TSSclassifier=strong | |||
|UniProt=P43681 | |||
|association_with_transcript=4bp_to_ENST00000370263_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_CHRNA4_5end | |||
|id=chr20:61992711..61992734,- | |||
|ontology_enrichment_celltype=CL:0000047!5.02e-08!8;CL:0000540!3.63e-07!6;CL:0000031!3.63e-07!6;CL:0000404!3.63e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000540;9.33e-08;6!CL:0000404;9.33e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.47e-09,8;CL:0000540,1.25e-07,6;CL:0000031,1.25e-07,6;CL:0000404,1.25e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.18e-12;82!CL:0000031;9.33e-08;6!UBERON:0006241;2.49e-07;3!UBERON:0003057;2.49e-07;3!UBERON:0006215;3.88e-07;3!UBERON:0003056;3.88e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.03e-71!82;UBERON:0005743!1.59e-70!86;UBERON:0000073!3.43e-68!94;UBERON:0001016!3.43e-68!94;UBERON:0001049!5.51e-65!57;UBERON:0005068!5.51e-65!57;UBERON:0006241!5.51e-65!57;UBERON:0007135!5.51e-65!57;UBERON:0000955!4.89e-57!69;UBERON:0006238!4.89e-57!69;UBERON:0002616!1.16e-55!59;UBERON:0001893!1.63e-54!34;UBERON:0002020!2.65e-54!34;UBERON:0003528!2.65e-54!34;UBERON:0002791!5.27e-52!33;UBERON:0003075!5.52e-51!86;UBERON:0007284!5.52e-51!86;UBERON:0002780!7.17e-51!41;UBERON:0001890!7.17e-51!41;UBERON:0006240!7.17e-51!41;UBERON:0001869!6.62e-50!32;UBERON:0003080!1.78e-49!42;UBERON:0002346!3.48e-48!90;UBERON:0002619!9.30e-44!22;UBERON:0007023!4.57e-39!115;UBERON:0001950!8.51e-39!20;UBERON:0004121!4.13e-38!169;UBERON:0000956!5.16e-38!25;UBERON:0000203!5.16e-38!25;UBERON:0000924!6.68e-37!173;UBERON:0006601!6.68e-37!173;UBERON:0003056!2.26e-36!61;UBERON:0000033!8.48e-34!123;UBERON:0000153!2.95e-33!129;UBERON:0007811!2.95e-33!129;UBERON:0002308!1.43e-17!9;UBERON:0000125!1.43e-17!9;UBERON:0003076!5.85e-16!15;UBERON:0003057!5.85e-16!15;UBERON:0004732!4.44e-15!13;UBERON:0001872!3.37e-14!5;UBERON:0000025!4.68e-14!194;UBERON:0002021!5.04e-14!5;UBERON:0002420!2.67e-13!9;UBERON:0007245!2.67e-13!9;UBERON:0010009!2.67e-13!9;UBERON:0010011!2.67e-13!9;UBERON:0000454!2.67e-13!9;UBERON:0004733!5.30e-13!12;UBERON:0002028!5.30e-13!12;UBERON:0007277!5.30e-13!12;UBERON:0009663!6.29e-13!7;UBERON:0001871!8.14e-12!7;UBERON:0002298!1.31e-11!8;UBERON:0000200!2.20e-11!6;UBERON:0004111!2.89e-11!241;UBERON:0000064!4.73e-11!219;UBERON:0002680!3.08e-10!9;UBERON:0001895!3.08e-10!9;UBERON:0010092!3.08e-10!9;UBERON:0000483!8.53e-10!309;UBERON:0000477!1.35e-09!286;UBERON:0000119!1.39e-09!312;UBERON:0000475!2.56e-09!365;UBERON:0000349!4.00e-09!5;UBERON:0000988!4.81e-09!3;UBERON:0006331!1.24e-08!3;UBERON:0002771!1.66e-08!3;UBERON:0000922!3.08e-07!612;UBERON:0000369!9.72e-07!4;UBERON:0002435!9.72e-07!4;UBERON:0000204!9.72e-07!4;UBERON:0010082!9.72e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.42e-51;22!UBERON:0001893;2.74e-45;34!UBERON:0000956;5.42e-45;25!UBERON:0000203;5.42e-45;25!UBERON:0001869;3.44e-44;32!UBERON:0001950;3.91e-43;20!UBERON:0003528;2.03e-42;34!UBERON:0002020;2.03e-42;34!UBERON:0002791;5.46e-41;32!UBERON:0002780;1.11e-33;41!UBERON:0001890;1.11e-33;41!UBERON:0000073;3.02e-32;53!UBERON:0002616;3.02e-32;53!UBERON:0000955;3.36e-26;68!UBERON:0001017;1.29e-22;75!UBERON:0001016;2.46e-21;83!UBERON:0004732;6.67e-17;13!UBERON:0001872;3.06e-16;5!UBERON:0002021;3.24e-16;5!UBERON:0000988;4.79e-15;3!UBERON:0004733;1.16e-13;12!UBERON:0002028;1.16e-13;12!UBERON:0000200;3.06e-13;6!UBERON:0002680;5.11e-13;9!UBERON:0001895;5.11e-13;9!UBERON:0002298;6.24e-13;6!UBERON:0001954;9.15e-11;2!UBERON:0003022;9.15e-11;2!UBERON:0002421;9.15e-11;2!UBERON:0002600;9.15e-11;2!UBERON:0007023;1.34e-10;114!UBERON:0002148;2.71e-10;2!UBERON:0005162;2.71e-10;2!UBERON:0000122;2.71e-10;2!UBERON:0006331;2.71e-10;2!UBERON:0009662;2.71e-10;2!UBERON:0011216;1.51e-09;132!UBERON:0000349;2.14e-09;5!UBERON:0000125;1.40e-08;9!UBERON:0002308;1.40e-08;9!UBERON:0001870;2.49e-07;3!UBERON:0002240;2.49e-07;3!UBERON:0005174;2.49e-07;3!UBERON:0001137;2.49e-07;3!UBERON:0001871;6.68e-07;6 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,3.09315525111078,1.34013012267479,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.844016498463076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.84666373047609,2.04089815956073,1.99613798001194,0,0,0,0,0,0,0.344743373241465,0,0,0,0.844175070377856,1.52581736317083,0.331737779793674,1.47773809476774,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88723172345896,0,1.1713222286267,0,0,0,0,0,3.36680037793539,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35588444468319,0,0,2.78567502205866,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18091875923721,1.49823746722733,0,0.137539436597234,0,0,0,3.21972650287531,0,0,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68067843270016,1.3223260174269,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,1.58634144372552,1.001527445652,0,0.443716206147409,1.92498849118289,0,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617602894321944,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511577485214607,0,0,0,0,0,0,0,0,0,0,0,0,2.24802287837608,4.25089728976755,0.798169295285756,2.05116364240755,1.26035848110859,3.25039086581824,1.93770774758221,1.42769420259154,0,0.235939446695481,0,0,0,0,0,0,0,0,0,0,0,3.10672889244615,0.781078098613847,1.65349437200947,3.10737469950143,3.28184885410932,0,0,0,0,0,0,0,0,0,0,0,3.12660771693426,3.8805936402081,0,0,0.156986185701028,1.88538707899202,0,0,0,0,1.07214816264985,0.632054446930906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356760272332706,0,0,0,0,0,0,0,0,1.17785080268967,0,2.5359343655004,0,0,0,0,0,0,0,0,0,0.716697915757256,0,3.39957450954573,3.9271562130634,0,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0,0,0.620597975171371,0,0.23806443146374,0,0,0,0.0636471582781649,0.404234377916439,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p3@CHRNA4 | |||
}} |
Revision as of 12:44, 21 January 2014
Short description: | p3@CHRNA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CHRNA4_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 4bp_to_ENST00000370263_5end |
EntrezGene: | CHRNA4 |
HGNC: | 1958 |
UniProt: | P43681 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.47e-09 | 8 |
neuron | 1.25e-07 | 6 |
neuroblast | 1.25e-07 | 6 |
electrically signaling cell | 1.25e-07 | 6 |