FFCP PHASE1:Hg19::chr20:24449821..24449843,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79953 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15885 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H7V2 | |||
|association_with_transcript=0bp_to_ENST00000376862,NM_024893,uc002wtw.1_5end | |||
|coexpression_cluster_id=C1480 | |||
|description=CAGE_peak_4_at_SYNDIG1_5end | |||
|id=chr20:24449821..24449843,+ | |||
|ontology_enrichment_celltype=CL:0000133!8.33e-12!59;CL:0002319!1.15e-09!25;CL:0000221!6.83e-09!71;CL:0000333!9.06e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0002603;6.50e-09;3!CL:0000064;6.23e-08;3!CL:0000067;6.23e-08;3!CL:0005012;6.23e-08;3!CL:0002304;6.23e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002603,7.37e-09,3;CL:0000064,7.53e-08,3;CL:0000067,7.53e-08,3;CL:0005012,7.53e-08,3;CL:0002304,7.53e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.69e-13;82!UBERON:0006241;4.86e-09;3!UBERON:0003057;4.86e-09;3!UBERON:0006215;3.44e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.01e-57!94;UBERON:0001016!1.01e-57!94;UBERON:0001017!6.35e-57!82;UBERON:0005743!1.06e-54!86;UBERON:0001049!5.88e-51!57;UBERON:0005068!5.88e-51!57;UBERON:0006241!5.88e-51!57;UBERON:0007135!5.88e-51!57;UBERON:0002346!9.58e-47!90;UBERON:0003075!1.21e-46!86;UBERON:0007284!1.21e-46!86;UBERON:0000955!6.34e-46!69;UBERON:0006238!6.34e-46!69;UBERON:0002616!1.64e-45!59;UBERON:0000924!8.92e-37!173;UBERON:0006601!8.92e-37!173;UBERON:0004121!4.02e-36!169;UBERON:0002780!9.44e-35!41;UBERON:0001890!9.44e-35!41;UBERON:0006240!9.44e-35!41;UBERON:0003080!1.35e-33!42;UBERON:0003056!2.61e-32!61;UBERON:0007023!7.64e-32!115;UBERON:0001893!8.86e-32!34;UBERON:0002020!1.10e-31!34;UBERON:0003528!1.10e-31!34;UBERON:0002791!8.79e-31!33;UBERON:0001869!2.58e-29!32;UBERON:0000033!8.74e-28!123;UBERON:0000153!3.08e-27!129;UBERON:0007811!3.08e-27!129;UBERON:0000956!6.50e-25!25;UBERON:0000203!6.50e-25!25;UBERON:0002619!1.96e-24!22;UBERON:0001950!4.86e-22!20;UBERON:0003076!2.10e-18!15;UBERON:0003057!2.10e-18!15;UBERON:0004732!4.47e-16!13;UBERON:0004733!8.59e-15!12;UBERON:0002028!8.59e-15!12;UBERON:0007277!8.59e-15!12;UBERON:0002680!1.52e-11!9;UBERON:0001895!1.52e-11!9;UBERON:0010092!1.52e-11!9;UBERON:0000025!1.47e-10!194;UBERON:0000119!2.77e-09!312;UBERON:0000475!1.41e-08!365;UBERON:0000483!1.79e-08!309;UBERON:0002037!2.43e-08!6;UBERON:0006215!2.43e-08!6;UBERON:0000064!3.19e-08!219;UBERON:0002308!3.32e-08!9;UBERON:0000125!3.32e-08!9;UBERON:0002298!6.95e-08!8;UBERON:0000200!7.02e-08!6;UBERON:0001871!1.37e-07!7;UBERON:0002021!3.65e-07!5;UBERON:0001872!4.72e-07!5;UBERON:0000477!5.19e-07!286;UBERON:0004111!8.75e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;8.50e-49;22!UBERON:0000073;5.40e-47;53!UBERON:0002616;5.40e-47;53!UBERON:0000956;2.20e-46;25!UBERON:0000203;2.20e-46;25!UBERON:0001893;2.11e-45;34!UBERON:0003528;2.34e-45;34!UBERON:0002020;2.34e-45;34!UBERON:0001869;3.50e-45;32!UBERON:0002791;1.16e-44;32!UBERON:0001950;6.64e-44;20!UBERON:0002780;3.09e-43;41!UBERON:0001890;3.09e-43;41!UBERON:0004732;2.99e-31;13!UBERON:0000955;5.62e-30;68!UBERON:0001017;1.82e-29;75!UBERON:0004733;1.34e-28;12!UBERON:0002028;1.34e-28;12!UBERON:0001016;1.47e-28;83!UBERON:0002680;5.41e-22;9!UBERON:0001895;5.41e-22;9!UBERON:0002037;2.08e-15;6!UBERON:0002298;6.95e-15;6!UBERON:0000200;4.21e-14;6!UBERON:0002021;2.78e-13;5!UBERON:0001872;1.43e-12;5!UBERON:0001871;3.22e-12;6!UBERON:0011216;1.02e-10;132!UBERON:0000125;5.12e-10;9!UBERON:0002308;5.12e-10;9!UBERON:0007023;7.61e-10;114!UBERON:0010314;1.30e-09;132!UBERON:0002240;4.86e-09;3!UBERON:0005174;4.86e-09;3!UBERON:0001137;4.86e-09;3!UBERON:0000349;6.48e-09;5!UBERON:0001870;1.51e-08;3!UBERON:0000988;2.78e-08;3!UBERON:0001896;2.78e-08;3!UBERON:0005290;2.78e-08;3!UBERON:0001778;6.23e-08;3!UBERON:0001775;6.23e-08;3!UBERON:0002420;2.78e-07;9!UBERON:0007245;2.78e-07;9!UBERON:0010009;2.78e-07;9!UBERON:0010011;2.78e-07;9!UBERON:0000454;2.78e-07;9!UBERON:0005162;5.66e-07;2!UBERON:0000122;5.66e-07;2 | |||
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|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0.487932798790507,2.33930010345897,2.24400760368678,4.38836610069323,0.85870796139317,1.36874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,1.45990461090791,2.17430079477356,1.77383517970051,1.05401742831751,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,1.05950199351452,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0,0,0.772921620136887,0,0,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,1.21973706129595,1.45782745153634,0.813357600086629,0.10366105501537,0.504641701751257,2.91981887260664,1.56449532329816,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,1.44331342025273,1.27523445472584,0.352226082707465,0,0,0,0.790204397959275,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0.290633938513962,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0.179060963239896,0,0,0,0,0.76228387266739,1.30139853857622,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0,0.234282829985426,0,0,0,0,0.368738337083406,0,0.783204629850962,0,0,0,0,0,0,0,0,0.460385919864187,0.561320188866147,0.640695746278505,0,0.965123526861645,0,0.154209693802656,0,0,0,0,0,0.601519410909855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0.290012154876366,0,0,0,0,0,0,0.445160178233687,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5745161103971,1.48171507906718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67271891179974,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,4.84666373047609,1.29875337426592,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,1.52581736317083,1.43753037910592,4.13766666534966,0.438770794307945,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.13350310124161,0,6.79366892603483,0,0,0,0.394584402849391,1.20990716048664,1.53036380815245,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,2.40581024632339,0,0,0.426905989478705,0,0,0,0.171594997861965,0,0,0,0,0.104602846312333,0.509991088181609,0.288950589901519,3.60252173225874,2.0535806833799,0,0,0,0.558564802544508,0.458320848023367,0,0,0.429226048136571,0.223171457441873,0.403100834920358,0,0,0,0,0,0,0,3.18091875923721,2.58786471611994,1.92903778158023,3.02586760513914,1.66176135211674,0,0,3.15897694621728,0,0.0788057072991982,0.419636705079985,0,0,0,0,0,0,0,0,0,0,0,1.36310417428337,0,0,0,1.80996138906171,2.11572162788304,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,4.43034089983493,1.22026264901963,1.6274820991845,1.14681839138014,2.77322628842131,2.91853093824502,0,0,0,0,0,0,0.28984205722165,0.149254802886874,0.233713309847224,0,0,0,0,0,0,0.310874401165561,0.147855149989634,0.159296767163702,1.34940933649081,0.155262956876259,0,0.265841714557995,0,0,0,0,0.181848659202559,0,0,0.796191777397232,0,0.686791410365586,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02496607435179,0,0,1.93561810612423,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639471856518258,1.07824811396682,2.51625506969434,0.218419276384028,0,0.425149840203366,1.11542187833102,0,0.318004350653419,0,0,0,0,2.31225210347254,2.8339315265117,2.55414174491442,2.05116364240755,2.01657356977374,2.07471757392654,3.06803726700517,9.99385941814081,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,1.35075169236789,2.34323429584154,1.86018116851066,2.28296916698065,2.18789923607288,0,0,0,0.127762427639595,2.14280734351315,1.00885116665647,0,0,0,0,0,2.10706172228178,1.77586488619693,0,0,0.078493092850514,0.314231179832004,0,0.913158720509496,0,0,0.214429632529969,5.05643557544725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0.118920090777569,0,0.109940516745429,0,0.0771741581079447,0.218559560503957,0,0,0,2.55201007249429,3.26751040359795,3.3812458206672,0.169927114687817,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,2.86679166302903,0,3.12760854878208,1.30905207102113,0,0,0,0,0,0.109265571963696,1.0135880080915,0,0.801652215796681,0,0,0.0757786982182394,0,0.829169439458779,3.41328886344254,0,0.23806443146374,0.129177819672012,0,0,0.381882949668989,0.404234377916439,0,0,0.0673520530145875,0.0717222053926763,0.332660356546013,0,0,0,0,2.34640942403454,0.122241444182866,0,0,0.402547587182052,0 | |||
|short_description=p4@SYNDIG1 | |||
}} |
Revision as of 10:35, 21 January 2014
Short description: | p4@SYNDIG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SYNDIG1_5end |
Coexpression cluster: | C1480_optic_neuroectodermal_corpus_cerebellum_diencephalon_occipital_Astrocyte |
Association with transcript: | 0bp_to_ENST00000376862, NM_024893, uc002wtw.1_5end |
EntrezGene: | SYNDIG1 |
HGNC: | 15885 |
UniProt: | Q9H7V2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebellum | 7.37e-09 | 3 |
ciliated cell | 7.53e-08 | 3 |
ciliated epithelial cell | 7.53e-08 | 3 |
multi-ciliated epithelial cell | 7.53e-08 | 3 |
non-pigmented ciliary epithelial cell | 7.53e-08 | 3 |