FFCP PHASE1:Hg19::chr20:6104114..6104136,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55612 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15889 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BQL6,F8W9F0,Q49AC8,Q54A15 | |||
|association_with_transcript=54bp_to_ENST00000217289,ENST00000339538,NM_017671,uc002wmr.2,uc002wms.2,uc010gbt.2_5end | |||
|description=CAGE_peak_9_at_FERMT1_5end | |||
|id=chr20:6104114..6104136,- | |||
|ontology_enrichment_celltype=CL:0000066!2.02e-25!254;CL:0002076!1.20e-21!43;CL:0000223!2.61e-19!59;CL:0002368!1.20e-14!13;CL:0002251!6.99e-12!21;CL:0002202!2.12e-10!9;CL:0002632!2.12e-10!9 | |||
|ontology_enrichment_celltype_v019=CL:0002368;6.86e-34;13!CL:0002076;2.46e-24;42!CL:0002202;3.05e-20;9!CL:0002632;3.05e-20;9!CL:0002621;6.22e-13;3!CL:0000307;1.28e-12;3!CL:0002328;3.11e-12;3!CL:0002327;2.21e-09;4!CL:0002159;3.26e-09;14!CL:0002251;1.82e-08;20!CL:0000312;1.29e-07;5!CL:0000362;4.22e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,6.21e-34,13;CL:0002076,1.06e-31,42;CL:0000066,4.70e-22,253;CL:0000223,1.50e-21,58;CL:0002202,3.08e-20,9;CL:0002632,3.08e-20,9;CL:0002621,6.37e-13,3;CL:0000068,1.62e-12,3;CL:0000069,1.62e-12,3;CL:0000307,1.62e-12,3;CL:0000377,1.62e-12,3;CL:0002328,2.78e-12,3;CL:0002327,1.72e-09,4;CL:0002159,3.38e-09,14;CL:0002251,2.06e-08,20;CL:0000312,1.46e-07,5;CL:0000362,4.30e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000377;1.28e-12;3!CL:0000223;1.52e-11;58 | |||
|ontology_enrichment_disease=DOID:305!1.99e-15!106;DOID:1749!2.03e-11!14;DOID:0050687!1.11e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:3493;8.29e-09;2!DOID:1749;8.42e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,6.24e-09,14;DOID:3493,8.98e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.37e-21!169;UBERON:0000925!3.37e-21!169;UBERON:0006595!3.37e-21!169;UBERON:0001007!2.93e-17!155;UBERON:0001555!2.93e-17!155;UBERON:0007026!2.93e-17!155;UBERON:0004921!2.14e-15!129;UBERON:0004185!2.14e-15!129;UBERON:0000077!7.59e-15!130;UBERON:0001004!4.48e-13!72;UBERON:0001041!1.80e-11!98;UBERON:0000065!3.19e-11!53;UBERON:0008947!4.43e-10!38;UBERON:0003258!4.43e-10!38;UBERON:0000481!4.84e-10!347;UBERON:0000072!1.47e-09!46;UBERON:0007196!2.82e-08!14;UBERON:0001558!2.82e-08!14;UBERON:0005911!4.01e-08!82;UBERON:0000064!4.22e-08!219;UBERON:0000466!1.00e-07!126;UBERON:0005153!1.19e-07!37;UBERON:0000464!1.77e-07!104;UBERON:0000344!2.30e-07!12;UBERON:0003104!4.58e-07!238;UBERON:0009142!4.58e-07!238;UBERON:0000922!6.00e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;6.22e-13;3!UBERON:0004815;3.11e-12;3!UBERON:0002031;3.11e-12;3!UBERON:0007196;9.79e-12;15!UBERON:0001558;9.79e-12;15!UBERON:0001911;2.21e-09;4!UBERON:0003350;2.36e-08;8!UBERON:0000486;3.27e-08;12!UBERON:0004807;9.15e-08;22!UBERON:0002185;1.67e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,6.37e-13,3;UBERON:0004815,2.78e-12,3;UBERON:0002031,2.78e-12,3;UBERON:0004119,8.92e-12,160;UBERON:0000925,8.92e-12,160;UBERON:0006595,8.92e-12,160;UBERON:0007196,9.83e-12,15;UBERON:0001558,9.83e-12,15;UBERON:0001911,1.72e-09,4;UBERON:0005333,1.72e-09,4;UBERON:0008425,1.72e-09,4;UBERON:0005311,1.72e-09,4;UBERON:0005153,1.54e-08,37;UBERON:0005911,2.29e-08,82;UBERON:0003350,2.51e-08,8;UBERON:0001004,2.74e-08,74;UBERON:0002185,1.57e-07,5;UBERON:0001007,2.23e-07,145;UBERON:0001555,2.23e-07,145;UBERON:0007026,2.23e-07,145 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,1.47440361900905,0.697801167972428,0.873765488520689,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0,1.83884244895785,2.409647350226,4.06729411183466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0.12663051166458,0,0,0,0,1.06748995729705,0.24666754841716,0.311211035399766,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,4.44499962275583,4.09119180886252,3.72845974005705,0.609868530647977,0.795178609928912,0.232387885739037,0.310983165046111,0.756962552626885,0.72995471815166,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0.330881918197182,0.435758888184812,0.237270619111097,0.134831308160164,0.392442930250692,0.769494313892781,0,0,0,1.47008711385542,0,0,0,0,0.122988438543114,0.171567810298526,3.73150970389327,2.24803506515239,2.01057944823262,0.740707561268237,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,1.00789276919316,1.98485136139341,4.83616022595381,3.77824120068151,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,1.20956117331872,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0.725156697549733,4.21063587636898,1.84161977871793,0,0,0,0,0.15403067420883,0,0,0.633309773357254,0,0.170093705276516,0,0,0.270946437543853,0,1.01950509218015,0,0,0,0,0,0,0.325378394664303,0,0,0,2.87132768998086,0,0,0.193341436584244,0,0,0,0,0.145016693914229,0.0852266274161009,0,4.13212288402445,3.84380134730212,2.4246415373971,1.4162089319777,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0.421258456238981,0,0,0,0,0.141405431953713,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.96577098898175,2.01090682660736,2.17781969722645,0,0.86101074534246,0,0.886860307073351,2.75668080248351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0.540911356951966,0,0,0.18714054040822,0,0,0,0.568272293612826,0.95497793895076,0,0.614321404198464,0,0.140669416410513,0,0,1.90012867315194,0,0.276283915531148,0.251932747854276,0,0.369254416383208,0,3.14539229015644,0.358042349351218,0,0.0986434056369336,0,0,0,0,0,0,0,0,1.365521379426,0.508507300585533,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0,0,0,0.139423744278603,0.153900517007594,0,0,0.538545866458633,0,0,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0.619202951523374,0,0,0,0,0.337005664903385,0,0.234264445725339,0,0.586993856796269,0,0,0,0,0,0,0.103688191397247,1.99396161812156,0.330991955875499,0.313932918407225,4.77889719091835,0,0,0,0.0979923974143777,1.74118413160805,0,0,0.290268993867255,0.146178634172371,0.164230914106418,0.387956065953678,0,0,0.137041924646751,0,0.126621591911757,0.782205530939212,0.160317640503067,1.28071796843612,0.39961921916426,2.59362750877391,0,0,1.87271237384595,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0.787831823072237,0.659326867049332,0.808842526250219,0,0,0,0.136203406111576,0.964518890790115,0.412618309791701,0.415440338029185,0,0,0.182248669974074,0.670869375198532,0,0.104909176269996,0.105600336519406,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91502377331055,0,0,0,0,0.157054096250234,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0.248385611765534,0,0.624902039810533,0,0,0.470531639396343,0,0,0,0.233713309847224,0.554805861502613,0,0,0,0,0.151230923763239,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0,0.179088841081487,0.308801447160972,0.657852148736121,0.353378291891762,0,0,0,0,0,0.138258436151731,0,0,0,0,0,1.69049698686902,0,0,0,0,0,0.279759015438889,1.24415452006595,0,0,0,0.109209638192014,0,0,0,0,0,0,0.80057074828547,0,0,0.192687675289379,0,0,0.205116364240755,0,0.138314504928436,0.484426936895553,0,0.981477185010256,0.707818340086442,0.917142992608395,0.693153996902029,0.381382095467167,1.3807198521202,0,0,0,0,0.523813388962845,0,6.2099556211159,0.202612753855184,0,0,0.0634158101939068,0,0,0.496211178389294,0,1.40538670403555,0,0,0,0,0.0887023701626388,0,0,0.271878931907327,0.0657727735628491,0,3.22571065487001,0.39246546425257,0.157115589916002,0.560544326627578,0,0,0,0,0,1.04617282831313,0,0,1.03608082081518,0.6828739083758,0,0,0.118332000730565,0.170426809518315,0,0,0,0,0,1.3741032706134,7.07123964897163,0,0,0,0,0,0,0,0.45178432815584,0,0.150962843566674,0.385870790539723,0,0,0,0,0,0,0,0,0,0,0,1.2498775702396,2.47026410200984,0.882655033580851,0,0,0,0,0.135982980381829,0,0,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| |||
|short_description=p9@FERMT1 | |||
}} |
Revision as of 10:10, 21 January 2014
Short description: | p9@FERMT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_FERMT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 54bp_to_ENST00000217289, ENST00000339538, NM_017671, uc002wmr.2, uc002wms.2, uc010gbt.2_5end |
EntrezGene: | FERMT1 |
HGNC: | 15889 |
UniProt: | Q9BQL6F8W9F0Q49AC8Q54A15 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 6.21e-34 | 13 |
endo-epithelial cell | 1.06e-31 | 42 |
epithelial cell | 4.70e-22 | 253 |
endodermal cell | 1.50e-21 | 58 |
epithelial cell of tracheobronchial tree | 3.08e-20 | 9 |
epithelial cell of lower respiratory tract | 3.08e-20 | 9 |
gingival epithelial cell | 6.37e-13 | 3 |
duct epithelial cell | 1.62e-12 | 3 |
branched duct epithelial cell | 1.62e-12 | 3 |
tracheal epithelial cell | 1.62e-12 | 3 |
tracheoblast | 1.62e-12 | 3 |
bronchial epithelial cell | 2.78e-12 | 3 |
mammary gland epithelial cell | 1.72e-09 | 4 |
general ecto-epithelial cell | 3.38e-09 | 14 |
epithelial cell of alimentary canal | 2.06e-08 | 20 |
keratinocyte | 1.46e-07 | 5 |
epidermal cell | 4.30e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 6.37e-13 | 3 |
lower respiratory tract epithelium | 2.78e-12 | 3 |
epithelium of bronchus | 2.78e-12 | 3 |
endoderm-derived structure | 8.92e-12 | 160 |
endoderm | 8.92e-12 | 160 |
presumptive endoderm | 8.92e-12 | 160 |
tracheobronchial tree | 9.83e-12 | 15 |
lower respiratory tract | 9.83e-12 | 15 |
mammary gland | 1.72e-09 | 4 |
mammary bud | 1.72e-09 | 4 |
mammary ridge | 1.72e-09 | 4 |
mammary placode | 1.72e-09 | 4 |
epithelial bud | 1.54e-08 | 37 |
endo-epithelium | 2.29e-08 | 82 |
epithelium of mucosa | 2.51e-08 | 8 |
respiratory system | 2.74e-08 | 74 |
bronchus | 1.57e-07 | 5 |
digestive system | 2.23e-07 | 145 |
digestive tract | 2.23e-07 | 145 |
primitive gut | 2.23e-07 | 145 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 6.24e-09 | 14 |
signet ring cell adenocarcinoma | 8.98e-09 | 2 |