FFCP PHASE1:Hg19::chr2:236402669..236402788,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=116987 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16922 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UPQ3 | |||
|association_with_transcript=0bp_to_ENST00000304032,ENST00000336665,ENST00000409457,NM_001037131,NM_001244888,NM_014914,uc002vvs.2,uc002vvt.2_5end | |||
|description=CAGE_peak_1_at_AGAP1_5end | |||
|id=chr2:236402669..236402788,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.33e-11!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.11e-11,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.15e-18!106;DOID:0050687!9.64e-17!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,9.01e-18,106;DOID:0050687,3.84e-16,143 | |||
|ontology_enrichment_uberon=UBERON:0000481!1.10e-25!347;UBERON:0000475!2.13e-21!365;UBERON:0000477!1.83e-19!286;UBERON:0001049!2.23e-19!57;UBERON:0005068!2.23e-19!57;UBERON:0006241!2.23e-19!57;UBERON:0007135!2.23e-19!57;UBERON:0007023!4.77e-19!115;UBERON:0004111!1.38e-18!241;UBERON:0000025!5.61e-18!194;UBERON:0000468!1.87e-17!659;UBERON:0000064!6.03e-17!219;UBERON:0000483!1.08e-16!309;UBERON:0000119!2.97e-16!312;UBERON:0000955!1.03e-15!69;UBERON:0006238!1.03e-15!69;UBERON:0000922!1.06e-15!612;UBERON:0002616!1.11e-15!59;UBERON:0000073!1.64e-15!94;UBERON:0001016!1.64e-15!94;UBERON:0004119!3.48e-15!169;UBERON:0000925!3.48e-15!169;UBERON:0006595!3.48e-15!169;UBERON:0002050!5.73e-15!605;UBERON:0005423!5.73e-15!605;UBERON:0001017!5.91e-15!82;UBERON:0000467!7.15e-15!625;UBERON:0000923!1.17e-14!604;UBERON:0005291!1.17e-14!604;UBERON:0006598!1.17e-14!604;UBERON:0002532!1.17e-14!604;UBERON:0000480!1.54e-14!626;UBERON:0001007!3.09e-14!155;UBERON:0001555!3.09e-14!155;UBERON:0007026!3.09e-14!155;UBERON:0005743!3.20e-14!86;UBERON:0000062!8.49e-14!511;UBERON:0004921!1.35e-13!129;UBERON:0004185!1.35e-13!129;UBERON:0004121!2.17e-13!169;UBERON:0000924!2.38e-13!173;UBERON:0006601!2.38e-13!173;UBERON:0003075!3.06e-13!86;UBERON:0007284!3.06e-13!86;UBERON:0002346!5.33e-13!90;UBERON:0003080!1.93e-12!42;UBERON:0000033!2.05e-12!123;UBERON:0002780!5.34e-12!41;UBERON:0001890!5.34e-12!41;UBERON:0006240!5.34e-12!41;UBERON:0001893!7.70e-12!34;UBERON:0002020!7.74e-12!34;UBERON:0003528!7.74e-12!34;UBERON:0000077!7.96e-12!130;UBERON:0002791!2.74e-11!33;UBERON:0000153!2.87e-11!129;UBERON:0007811!2.87e-11!129;UBERON:0003104!5.16e-11!238;UBERON:0009142!5.16e-11!238;UBERON:0001869!1.21e-10!32;UBERON:0001041!4.65e-10!98;UBERON:0005177!7.50e-10!107;UBERON:0000466!4.29e-09!126;UBERON:0003076!1.45e-08!15;UBERON:0003057!1.45e-08!15;UBERON:0002100!2.10e-08!216;UBERON:0002619!2.79e-08!22;UBERON:0001048!3.39e-08!168;UBERON:0003056!3.86e-08!61;UBERON:0001950!6.53e-08!20;UBERON:0005409!7.08e-08!35;UBERON:0000956!7.85e-08!25;UBERON:0000203!7.85e-08!25;UBERON:0004732!2.06e-07!13;UBERON:0004733!8.98e-07!12;UBERON:0002028!8.98e-07!12;UBERON:0007277!8.98e-07!12;UBERON:0000160!9.07e-07!27;UBERON:0000464!9.98e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.13e-10;34!UBERON:0002020;2.13e-10;34!UBERON:0000073;2.38e-10;53!UBERON:0002616;2.38e-10;53!UBERON:0001893;3.59e-10;34!UBERON:0002791;1.34e-09;32!UBERON:0001869;1.38e-09;32!UBERON:0002780;5.04e-09;41!UBERON:0001890;5.04e-09;41!UBERON:0002619;2.92e-08;22!UBERON:0001950;5.93e-08;20!UBERON:0000956;6.59e-08;25!UBERON:0000203;6.59e-08;25!UBERON:0004732;1.81e-07;13!UBERON:0000955;2.41e-07;68!UBERON:0001016;2.87e-07;83!UBERON:0001017;5.73e-07;75!UBERON:0004733;7.99e-07;12!UBERON:0002028;7.99e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,8.05e-29,223;UBERON:0001049,5.09e-19,56;UBERON:0005068,5.09e-19,56;UBERON:0006241,5.09e-19,56;UBERON:0007135,5.09e-19,56;UBERON:0007023,9.37e-19,114;UBERON:0004111,2.25e-18,240;UBERON:0000025,7.87e-18,192;UBERON:0000073,2.83e-17,53;UBERON:0002616,2.83e-17,53;UBERON:0000483,2.10e-16,306;UBERON:0000119,5.74e-16,309;UBERON:0001016,8.81e-16,89;UBERON:0000955,2.26e-15,68;UBERON:0006238,2.26e-15,68;UBERON:0001017,1.70e-14,81;UBERON:0003075,5.31e-14,82;UBERON:0007284,5.31e-14,82;UBERON:0002346,1.02e-13,86;UBERON:0004121,6.78e-13,171;UBERON:0000924,6.78e-13,171;UBERON:0006601,6.78e-13,171;UBERON:0004119,8.01e-13,160;UBERON:0000925,8.01e-13,160;UBERON:0006595,8.01e-13,160;UBERON:0001007,3.29e-12,145;UBERON:0001555,3.29e-12,145;UBERON:0007026,3.29e-12,145;UBERON:0002780,4.57e-12,41;UBERON:0001890,4.57e-12,41;UBERON:0003080,4.57e-12,41;UBERON:0006240,4.57e-12,41;UBERON:0001893,6.60e-12,34;UBERON:0003528,6.63e-12,34;UBERON:0002020,6.63e-12,34;UBERON:0000922,8.05e-12,592;UBERON:0010314,1.00e-11,132;UBERON:0004921,1.09e-11,118;UBERON:0010371,1.47e-11,104;UBERON:0002791,9.64e-11,32;UBERON:0001869,1.06e-10,32;UBERON:0005423,2.10e-10,581;UBERON:0005177,1.15e-08,101;UBERON:0003076,1.30e-08,15;UBERON:0003057,1.30e-08,15;UBERON:0000923,1.71e-08,560;UBERON:0010316,1.71e-08,560;UBERON:0005291,1.71e-08,560;UBERON:0006598,1.71e-08,560;UBERON:0010317,1.71e-08,560;UBERON:0002532,1.71e-08,560;UBERON:0002050,2.51e-08,564;UBERON:0002619,2.52e-08,22;UBERON:0001041,2.91e-08,87;UBERON:0003056,3.48e-08,61;UBERON:0001950,5.94e-08,20;UBERON:0000956,7.14e-08,25;UBERON:0000203,7.14e-08,25;UBERON:0002100,1.45e-07,199;UBERON:0004732,1.88e-07,13;UBERON:0004733,8.30e-07,12;UBERON:0002028,8.30e-07,12;UBERON:0007277,8.30e-07,12 | |||
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| |||
|short_description=p1@AGAP1 | |||
}} |
Revision as of 09:21, 21 January 2014
Short description: | p1@AGAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AGAP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000304032, ENST00000336665, ENST00000409457, NM_001037131, NM_001244888, NM_014914, uc002vvs.2, uc002vvt.2_5end |
EntrezGene: | AGAP1 |
HGNC: | 16922 |
UniProt: | Q9UPQ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.11e-11 | 253 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.01e-18 | 106 |
cell type cancer | 3.84e-16 | 143 |