FFCP PHASE1:Hg19::chr2:232545267..232545301,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:232545267..232545301,+ | |||
|id=chr2:232545267..232545301,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.08e-17!254;CL:0000039!8.07e-12!7;CL:0000586!8.07e-12!7;CL:0000223!5.48e-10!59;CL:0002322!9.07e-09!5;CL:0002076!5.77e-08!43 | |||
|ontology_enrichment_celltype_v019=CL:0000123;4.40e-14;2!CL:0000242;4.40e-14;2!CL:0002319;1.01e-10;25!CL:0000540;2.95e-10;6!CL:0000404;2.95e-10;6!CL:0000039;2.74e-08;7!CL:0000586;2.74e-08;7!CL:1001319;3.00e-07;1!CL:1000600;3.00e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,4.55e-14,2;CL:0002319,9.99e-11,25;CL:0000540,2.91e-10,6;CL:0000031,2.91e-10,6;CL:0000404,2.91e-10,6;CL:0000039,3.53e-08,7;CL:0000586,3.53e-08,7;CL:0000047,8.38e-08,8;CL:1001319,2.07e-07,1;CL:1000600,2.07e-07,1;CL:0000066,4.78e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0009117;8.68e-15;10!UBERON:0005564;8.68e-15;10!CL:0000031;2.95e-10;6 | |||
|ontology_enrichment_disease=DOID:305!1.14e-25!106;DOID:0050687!5.68e-21!143;DOID:162!1.72e-14!235;DOID:14566!7.91e-14!239;DOID:3095!7.47e-09!22;DOID:2994!7.47e-09!22;DOID:1749!2.35e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:305;2.52e-09;106!DOID:1799;3.00e-07;1!DOID:10165;3.00e-07;1!DOID:3111;3.00e-07;1!DOID:1798;3.00e-07;1!DOID:3603;3.00e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.22e-18,106;DOID:0050687,9.46e-13,143;DOID:162,4.38e-11,235;DOID:14566,9.46e-11,239;DOID:3111,1.83e-07,1;DOID:3603,1.83e-07,1;DOID:1799,3.20e-07,1;DOID:10165,3.20e-07,1;DOID:1798,3.20e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000344!9.33e-13!12;UBERON:0003729!3.75e-08!5;UBERON:0004119!4.03e-07!169;UBERON:0000925!4.03e-07!169;UBERON:0006595!4.03e-07!169;UBERON:0003343!6.40e-07!4;UBERON:0004785!6.40e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;1.51e-07;1!UBERON:0005056;1.51e-07;1!UBERON:0004176;1.51e-07;1!UBERON:0000473;2.63e-07;8!UBERON:0004645;3.00e-07;1!UBERON:0001256;3.00e-07;1!UBERON:0001259;3.00e-07;1!UBERON:0000991;6.21e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004176,2.63e-09,22;UBERON:0000997,1.42e-07,1;UBERON:0005056,1.42e-07,1;UBERON:0003886,1.55e-07,54;UBERON:0004645,2.07e-07,1;UBERON:0001256,2.07e-07,1;UBERON:0001259,2.07e-07,1;UBERON:0000473,3.27e-07,8;UBERON:0002323,3.45e-07,46;UBERON:0000991,6.55e-07,21;UBERON:0009196,6.55e-07,21;UBERON:0009117,6.55e-07,21;UBERON:0005564,6.55e-07,21 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90361775633475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731842236777572,0.927708378250397,0.232387885739037,0.621966330092223,0.252320850875628,5.83963774521328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.447749509444357,0,0,0.256450125116389,0.328014645699706,0,0,0,0.082509499920588,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0.192190067365106,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36852972734796,0,0,0,0,0,0.296964680832639,0,0,0,0,4.28490072989575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0.23056390438806,0.359030577639089,0.108647371922008,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,1.41353071433941,0,0.995261931078505,0.0884575645033392,0,2.07564790076435,0.123563938946503,0.104421949505455,0,0,0,0.182454789215666,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44980993535944,0.174118413160805,0,0.171986032471617,1.06431964417994,1.0232504392066,1.23173185579814,0,0,0,0,0,0.0633107959558787,2.73771935828724,0,0,0,0.576361668616424,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05154941711726,0,0,0,0,0,0,0,0,0,0.945398187686684,0.576911008668165,0.741438982396034,0,0.76205998859206,0,0,6.59087908706579,5.22649859069488,5.81616473240859,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,2.30298236783334,0,0,1.77987976358325,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0.704815022316672,0,0,0,0,0.790446527591777,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0,0,0,0,1.38348634936231,0,0,0,0.235265819698172,6.08835377548946,13.3327346321959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,1.90180911022764,0,0,0,0,0,0,0.622077260032973,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0.0981477185010256,0.235939446695481,0.366857197043358,0.808679663052368,0,0,0,0,0,0,1.30953347240711,0,0.295712172434091,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0.171488009437418,0,0,0.354581522651905,0,0,0,0,0,0,0,0,5.21444918717998,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0.294450700845729,1.46301509978723,0,0,0,0,4.67878926924211,0.795803100645473,0,0.79062257427272,0,1.35866559210006,0.0771741581079447,0,0.470317296361523,0,0.235676547101626,0,0,0,0,0,0,0.0999411559249289,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,1.26166424835079,0.218531143927391,3.4208595273088,0.509944148709909,1.3360870263278,2.02168778976659,1.0028301571695,0,0,0,0.103432995861895,0,0,0,0,0.112131862580613,0,0,0.217716747896961,0,0.134704106029175,0,0,1.62806537221949,0.640364075266293,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:232545267..232545301,+ | |||
}} |
Revision as of 09:11, 21 January 2014
Short description: | p@chr2:232545267..232545301, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:232545267..232545301, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.55e-14 | 2 |
neural cell | 9.99e-11 | 25 |
neuron | 2.91e-10 | 6 |
neuroblast | 2.91e-10 | 6 |
electrically signaling cell | 2.91e-10 | 6 |
germ line cell | 3.53e-08 | 7 |
germ cell | 3.53e-08 | 7 |
neuronal stem cell | 8.38e-08 | 8 |
bladder cell | 2.07e-07 | 1 |
lower urinary tract cell | 2.07e-07 | 1 |
epithelial cell | 4.78e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
external genitalia | 2.63e-09 | 22 |
mammalian vulva | 1.42e-07 | 1 |
external female genitalia | 1.42e-07 | 1 |
body cavity precursor | 1.55e-07 | 54 |
urinary bladder urothelium | 2.07e-07 | 1 |
wall of urinary bladder | 2.07e-07 | 1 |
mucosa of urinary bladder | 2.07e-07 | 1 |
testis | 3.27e-07 | 8 |
body cavity | 3.45e-07 | 46 |
gonad | 6.55e-07 | 21 |
indifferent external genitalia | 6.55e-07 | 21 |
indifferent gonad | 6.55e-07 | 21 |
gonad primordium | 6.55e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.22e-18 | 106 |
cell type cancer | 9.46e-13 | 143 |
cancer | 4.38e-11 | 235 |
disease of cellular proliferation | 9.46e-11 | 239 |
cystadenocarcinoma | 1.83e-07 | 1 |
mucinous cystadenocarcinoma | 1.83e-07 | 1 |
islet cell tumor | 3.20e-07 | 1 |
endocrine pancreas cancer | 3.20e-07 | 1 |
pancreatic endocrine carcinoma | 3.20e-07 | 1 |