FFCP PHASE1:Hg19::chr2:224866475..224866482,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5270 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=8951 | |||
|TSSclassifier=weak | |||
|UniProt=P07093 | |||
|association_with_transcript=134bp_to_M17783_5end | |||
|coexpression_cluster_id=C354 | |||
|description=CAGE_peak_24_at_SERPINE2_5end | |||
|id=chr2:224866475..224866482,- | |||
|ontology_enrichment_celltype=CL:0000055!2.60e-13!180;CL:0000057!1.94e-11!75;CL:0002620!1.79e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0000153;1.43e-14;9!CL:0000447;1.43e-14;9!CL:0002541;5.72e-12;3!CL:0002579;8.82e-12;3!CL:0000135;1.09e-11;3!CL:0000214;1.09e-11;3!CL:0000388;1.09e-11;3!CL:0002334;4.83e-11;12!CL:0000499;6.81e-10;28!CL:0002581;7.97e-10;1!CL:0002616;9.43e-10;1!CL:0000327;8.27e-09;15!CL:0002595;3.44e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.54e-14,9;CL:0000447,1.54e-14,9;CL:0002541,6.04e-12,3;CL:0000135,8.36e-12,3;CL:0000388,8.36e-12,3;CL:0002579,9.32e-12,3;CL:0000214,1.43e-11,3;CL:0002334,4.35e-11,12;CL:0000499,6.49e-10,28;CL:0002581,7.98e-10,1;CL:0002616,9.44e-10,1;CL:0000327,8.62e-09,15;CL:0000057,2.87e-07,76;CL:0002595,4.57e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!1.34e-07!5;DOID:450!1.34e-07!5;DOID:66!1.34e-07!5;DOID:423!1.34e-07!5;DOID:0080000!1.34e-07!5;DOID:11722!1.34e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:0060084;8.82e-12;3!DOID:127;8.82e-12;3!DOID:3369;3.53e-09;1!DOID:0060072;4.69e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,8.83e-12,3;DOID:127,8.83e-12,3;DOID:3369,3.83e-09,1;DOID:0060072,4.69e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0002097!2.24e-07!40;UBERON:0002199!6.74e-07!45;UBERON:0002416!6.74e-07!45;UBERON:0003102!7.12e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0005406;7.67e-18;2!UBERON:0004457;1.43e-14;9!UBERON:0000042;1.43e-14;9!UBERON:0003124;5.72e-12;3!UBERON:0000920;5.72e-12;3!UBERON:0007846;1.09e-11;3!UBERON:0006915;1.09e-11;3!UBERON:0007616;1.09e-11;3!UBERON:0000043;1.09e-11;3!UBERON:0007845;1.09e-11;3!UBERON:0002217;1.09e-11;3!UBERON:0002018;1.09e-11;3!UBERON:0003834;3.44e-07;5!UBERON:0001533;3.44e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,7.68e-18,2;UBERON:0000920,6.04e-12,3;UBERON:0007846,8.36e-12,3;UBERON:0000043,8.36e-12,3;UBERON:0007845,8.36e-12,3;UBERON:0006915,1.43e-11,3;UBERON:0007616,1.43e-11,3;UBERON:0002217,1.43e-11,3;UBERON:0002018,1.43e-11,3;UBERON:0004457,6.61e-11,12;UBERON:0000042,6.61e-11,12;UBERON:0003834,4.57e-07,5;UBERON:0001533,4.57e-07,5;UBERON:0004923,9.16e-07,66 | |||
|phase1_expression=0.181678379270557,0,0.422863212287913,0,0.446961094427288,4.36169262050184,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0.994192127183747,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869079113764942,1.5905718941022,4.86634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.886413581652058,0.264818361626438,3.72887606973458,0.354668382198357,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0.747243402759005,0.117434498643765,0.323745888736263,0,0,0.122834317311768,0.206651562351531,0,0.741800787835671,0,0,0,0,0,0,0.30648779579902,1.05166641234618,0.113432183160021,0.717558542755448,0.427114777637135,0.423863802319124,0.900273288253207,0.824420233907511,0.515281080091258,0,0,0.389748020644795,0,0.276149695926898,0.323292113637624,1.77504796258307,0.201504196455281,0,0.193260853163297,0,0.573609190778008,0,0,0.116193942869518,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.402115889646523,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.063497894292169,0.381988425558278,0,0,0.925447434329912,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.289562613335158,1.43833425785268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0.356857977594324,0.315404830067869,0.35142424497814,0,0,0,0.664225598535437,0,0.781952530212746,0,0,0,0,0,0,0,0,1.73675465473144,0,0,1.53766979106841,0,4.02134802859019,5.93672265779964,0,0,0,0,0.116210378459959,0,0.802025881213139,0.0920809889358963,0.34444334449382,0.182091168006717,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0.330569830721956,0.384380134730212,0,0.2023155617111,0.464845549297286,2.20368642781448,0,0,0,0,0.18532421910392,0.429374660225974,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0.353437207037059,0.202182481573316,0,0.421258456238981,0,1.21856744815642,0,0,0.282810863907425,0,0,0.66343897524122,1.31535265576129,0,0,0,0.6196469961995,0,0.286822704408103,0.196498082026242,0.35667105148125,0,3.16661452946496,1.31717957183961,0.379473173765715,0,0.0962221127255121,0.670302275535787,0,0,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,3.19001159731919,0.824378340616761,3.19820865611181,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0.429765441419957,0,0,0,0,0,0,0.223171457441873,0,0.360299883542404,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0.537862017998534,0,0,0,0,2.17199840701485,0,2.93928624098468,0,0,0,0.226624183040251,0,0,0.129282956361551,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0.454947352624943,0,0,0,0,0,0,0,0.378806010550178,0,0.889811221596536,0,0,0.621748802331122,0.591420599958536,0,0,0,0.414706207840855,0,0,0.300515217994437,0,0,0.181848659202559,0.214821114084977,0,0,0.400027764663154,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0.762764190934334,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0.227662191351298,0.177404740325278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0.0852134047591577,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,3.23522940041993,1.73050624849516,0,0,0.126698501011437,0.101988829741982,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359300808426348,0,0,0.406896178315738,0,0,0 | |||
|short_description=p24@SERPINE2 | |||
}} |
Revision as of 08:56, 21 January 2014
Short description: | p24@SERPINE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_SERPINE2_5end |
Coexpression cluster: | C354_Fibroblast_Preadipocyte_Chondrocyte_chorionic_tenocyte_Synoviocyte_Smooth |
Association with transcript: | 134bp_to_M17783_5end |
EntrezGene: | SERPINE2 |
HGNC: | 8951 |
UniProt: | P07093 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.54e-14 | 9 |
carbohydrate secreting cell | 1.54e-14 | 9 |
chorionic membrane mesenchymal stem cell | 6.04e-12 | 3 |
fibrocyte | 8.36e-12 | 3 |
tendon cell | 8.36e-12 | 3 |
omentum preadipocyte | 9.32e-12 | 3 |
synovial cell | 1.43e-11 | 3 |
preadipocyte | 4.35e-11 | 12 |
stromal cell | 6.49e-10 | 28 |
perirenal preadipocyte | 7.98e-10 | 1 |
perirenal adipocyte cell | 9.44e-10 | 1 |
extracellular matrix secreting cell | 8.62e-09 | 15 |
fibroblast | 2.87e-07 | 76 |
smooth muscle cell of the subclavian artery | 4.57e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 7.68e-18 | 2 |
egg chorion | 6.04e-12 | 3 |
dense regular connective tissue | 8.36e-12 | 3 |
tendon | 8.36e-12 | 3 |
regular connective tissue | 8.36e-12 | 3 |
stratified squamous epithelium | 1.43e-11 | 3 |
layer of synovial tissue | 1.43e-11 | 3 |
synovial joint | 1.43e-11 | 3 |
synovial membrane of synovial joint | 1.43e-11 | 3 |
cavity lining | 6.61e-11 | 12 |
serous membrane | 6.61e-11 | 12 |
thoracic segment blood vessel | 4.57e-07 | 5 |
subclavian artery | 4.57e-07 | 5 |
organ component layer | 9.16e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 8.83e-12 | 3 |
leiomyoma | 8.83e-12 | 3 |
peripheral primitive neuroectodermal tumor | 3.83e-09 | 1 |
benign neoplasm | 4.69e-09 | 4 |