FFCP PHASE1:Hg19::chr2:218843565..218843592,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7145 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11973 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-23bp_to_uc002vgv.1_5end | |||
|coexpression_cluster_id=C1040 | |||
|description=CAGE_peak_8_at_TNS1_5end | |||
|id=chr2:218843565..218843592,- | |||
|ontology_enrichment_celltype=CL:0002139!1.57e-14!24;CL:0002078!1.77e-12!44;CL:0000115!7.13e-12!35;CL:0000071!7.31e-11!18;CL:0002546!7.31e-11!18;CL:0000213!5.39e-09!57;CL:0000215!5.39e-09!57;CL:1000413!6.76e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.83e-15;24!CL:0000071;2.19e-12;18!CL:0000115;1.98e-11;36!CL:1000413;4.10e-09;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.62e-15,24;CL:0000115,1.83e-13,36;CL:0000071,1.67e-12,18;CL:0002546,1.67e-12,18;CL:0002078,9.07e-10,45;CL:1000413,3.23e-09,9;CL:0000213,2.35e-07,58;CL:0000215,2.35e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;2.19e-12;18!UBERON:0004872;1.62e-09;7!UBERON:0006603;4.70e-09;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.12e-42!115;UBERON:0000477!9.98e-21!286;UBERON:0004111!1.16e-19!241;UBERON:0000025!6.66e-17!194;UBERON:0003075!1.96e-16!86;UBERON:0007284!1.96e-16!86;UBERON:0000483!4.92e-15!309;UBERON:0002346!7.34e-15!90;UBERON:0000119!1.64e-14!312;UBERON:0001049!2.86e-14!57;UBERON:0005068!2.86e-14!57;UBERON:0006241!2.86e-14!57;UBERON:0007135!2.86e-14!57;UBERON:0002616!1.18e-12!59;UBERON:0005743!4.22e-12!86;UBERON:0001986!7.31e-11!18;UBERON:0004638!7.31e-11!18;UBERON:0004852!7.31e-11!18;UBERON:0001017!1.24e-10!82;UBERON:0000481!1.58e-10!347;UBERON:0000955!4.16e-10!69;UBERON:0006238!4.16e-10!69;UBERON:0000468!9.35e-10!659;UBERON:0000073!1.71e-09!94;UBERON:0001016!1.71e-09!94;UBERON:0003056!3.27e-09!61;UBERON:0000064!3.49e-09!219;UBERON:0003080!5.11e-09!42;UBERON:0000487!5.83e-09!22;UBERON:0000467!5.98e-09!625;UBERON:0000480!7.64e-09!626;UBERON:0000153!1.72e-08!129;UBERON:0007811!1.72e-08!129;UBERON:0002780!2.16e-08!41;UBERON:0001890!2.16e-08!41;UBERON:0006240!2.16e-08!41;UBERON:0003103!2.31e-08!69;UBERON:0001893!4.25e-08!34;UBERON:0006914!4.40e-08!25;UBERON:0002020!6.04e-08!34;UBERON:0003528!6.04e-08!34;UBERON:0003915!6.76e-08!9;UBERON:0004700!6.76e-08!9;UBERON:0001917!6.76e-08!9;UBERON:0000922!8.43e-08!612;UBERON:0002791!9.31e-08!33;UBERON:0000062!1.17e-07!511;UBERON:0000033!1.25e-07!123;UBERON:0001869!1.91e-07!32;UBERON:0002050!2.03e-07!605;UBERON:0005423!2.03e-07!605;UBERON:0003887!2.81e-07!21;UBERON:0000489!3.11e-07!32;UBERON:0000923!4.36e-07!604;UBERON:0005291!4.36e-07!604;UBERON:0006598!4.36e-07!604;UBERON:0002532!4.36e-07!604;UBERON:0003076!5.66e-07!15;UBERON:0003057!5.66e-07!15;UBERON:0004876!9.17e-07!20;UBERON:0003064!9.47e-07!37;UBERON:0003914!9.58e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.19e-12;18!UBERON:0001986;2.19e-12;18!UBERON:0004852;2.19e-12;18!UBERON:0000487;1.33e-09;22!UBERON:0003915;4.10e-09;9!UBERON:0004700;4.10e-09;9!UBERON:0001917;4.10e-09;9!UBERON:0006914;4.11e-08;25!UBERON:0007023;5.85e-08;114!UBERON:0006947;3.77e-07;3!UBERON:0004054;3.77e-07;3!UBERON:0003978;8.73e-07;3!UBERON:0000946;8.73e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.13e-30,114;UBERON:0004638,1.67e-12,18;UBERON:0001986,1.67e-12,18;UBERON:0004852,1.67e-12,18;UBERON:0000487,1.07e-09,22;UBERON:0003915,3.23e-09,9;UBERON:0004700,3.23e-09,9;UBERON:0001917,3.23e-09,9;UBERON:0000055,2.30e-08,68;UBERON:0006914,3.43e-08,25;UBERON:0002049,4.76e-08,78;UBERON:0007798,4.76e-08,78;UBERON:0001009,9.13e-08,112;UBERON:0004872,1.30e-07,83;UBERON:0006947,3.67e-07,3;UBERON:0004054,3.67e-07,3;UBERON:0007500,8.01e-07,59;UBERON:0001981,8.01e-07,59;UBERON:0004537,8.01e-07,59;UBERON:0006965,8.01e-07,59;UBERON:0003978,8.27e-07,3;UBERON:0009751,8.27e-07,3;UBERON:0000946,8.27e-07,3;UBERON:0002523,8.27e-07,3;UBERON:0005983,8.27e-07,3;UBERON:0002165,8.27e-07,3;UBERON:0002062,8.27e-07,3;UBERON:0007280,8.27e-07,3;UBERON:0005409,9.26e-07,25 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0.737201809504527,0,0,0.263766978228454,0.123766352960047,0,0,0,0,0,0.492484232307152,0.816002764977012,0.313454721478088,0,0.273748850145768,0.627713197974014,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0.567208902984407,0.443458794925128,0.527008714158756,5.56661070865279,0,0,0,0,0,0,0,0,2.18638648103376,0.860234595106124,4.85996702250632,1.69592382577203,2.09749718104953,1.92582629358047,2.50793959844173,1.03366703667732,0.71153252537342,1.33888245105868,4.83395180530976,0,5.36936526605973,0.735326160691737,4.86085168729056,3.48268940307911,2.91888184414021,2.36484109014977,0,0.949265659568129,0.732806975721629,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0.269421344139376,0,1.21085942115945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,2.95262181849859,4.20725321410337,0.8231480226628,1.47008711385542,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0.469634776943287,1.58803092537181,0.925971025153221,2.28304982681518,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0.144119953416961,0,0,0.381988425558278,1.17217447210047,0,0.102827492703324,0,2.00078502841405,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0.266422179016099,0,0,0,0,0,0,0.301439377059586,0,1.19967589418468,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,1.10422342547226,0,0,0,0,0,0,1.80567659836631,2.27407504055985,0,0.664225598535437,0.184369168541703,0,0.391602314925481,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0.229628896329213,0,0.393373244878272,0.451199612907412,0.308061348417659,0.784349769176855,0,0.527758144464379,0,0.680374821106063,0.647747748306418,3.08454505380579,1.08378575017541,0.501689773854853,0.254876273045038,0.831076008928724,0.447749509444357,0,0,0.512900250232778,0.328014645699706,0.325378394664303,3.60643540767028,0,0,0,0,0,0.290012154876366,0,0,0,0,0,0.0852266274161009,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33441135746677,0,0.42793898803392,0,0,0,0,0.235624804691373,0,0,0,0.48763373908959,0.243713489631284,0,0.409499734223957,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0.670302275535787,0,2.54188262097304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78365540616599,0,0,0,0,0.296964680832639,0,0,0.422008249231538,0.111308705022906,0,0.63337622438398,8.16916751829386,2.76283915531148,0,0,0,0,0,0,0,14.0073636004446,0,0,0.969332746095218,0.74214478529481,0,0,0,5.79999660347835,0,0,0,0,0,0.173624994933292,0.885741385813839,1.08536794762867,0,0.552896299656123,0.591095237907095,1.09692698576986,0,0,16.698206095324,0,0,0,0.108647371922008,0,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,6.96683351754953,6.98814759576379,10.3875124638716,0,0,0,0.876214728748802,1.60515529459758,0.468528891450678,0,0,0,7.89168805698781,6.04953580243319,0,2.71702292402498,0,0.103688191397247,0,0,0,0,0,0,0,0,0,5.76598005198699,0,0,0,0,6.11030803877042,0,1.80784592624426,0,0,0.823040347426423,0.586654148204409,0,7.89776080535604,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0.859530882839914,0,4.18923601908381,10.3122190805258,2.87149209830726,7.98716001995964,15.02291168478,6.69514372325618,10.4806217079293,0,0,0,0,0,0,0,0,2.17925449778521,0.160753148465019,0,0,0,0,0.364497339948148,0,3.54625682846392,7.81573363211472,0,0,0,4.2881719582402,4.63464379255802,0,0.542999601753713,0.864221491201268,0.326587360109409,1.19730191562487,0,0,0.453248366080503,0.732761168390412,1.32506888912221,0.258565912723101,0.66116300871345,0,0,2.77647272676006,6.9169894243853,2.07119527673598,3.47316215268366,0,0,0,0,0.2506898940227,0.612691153526923,1.96723578425883,0,0,0.244052529803926,0.625954653532499,1.14681839138014,1.22021956690538,1.36612086471044,0,0,0.151649117541648,0.285465333544967,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0.477890301491107,0.449803112163605,0,0,0.265841714557995,0.521745061811734,0.300515217994437,0,0,0,0.537052785212442,0,1.59238355479446,0,0,0,0,0,0.428883182749851,0,0.680117776536817,0,0.244736704506468,0.358177682162975,0.617602894321944,0,0,0,0.168942440653073,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578063025868136,0,0.638535436228605,0.41023272848151,0.252071696221718,0.829887029570615,0.807378228159255,0,0,0,0,0,0.381382095467167,0,0.596748666348824,6.24245725298835,0,0.781514011233092,0,0,0,0.472763092328763,0,0.620060389503552,0.824405532520789,0,0,7.93937885422871,0,0,0.535701835878287,0,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| |||
|short_description=p8@TNS1 | |||
}} |
Revision as of 08:35, 21 January 2014
Short description: | p8@TNS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_TNS1_5end |
Coexpression cluster: | C1040_smooth_aorta_heart_bladder_uterus_penis_cervix |
Association with transcript: | -23bp_to_uc002vgv.1_5end |
EntrezGene: | TNS1 |
HGNC: | 11973 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.62e-15 | 24 |
endothelial cell | 1.83e-13 | 36 |
blood vessel endothelial cell | 1.67e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.67e-12 | 18 |
meso-epithelial cell | 9.07e-10 | 45 |
endothelial cell of artery | 3.23e-09 | 9 |
lining cell | 2.35e-07 | 58 |
barrier cell | 2.35e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.13e-30 | 114 |
blood vessel endothelium | 1.67e-12 | 18 |
endothelium | 1.67e-12 | 18 |
cardiovascular system endothelium | 1.67e-12 | 18 |
simple squamous epithelium | 1.07e-09 | 22 |
endothelial tube | 3.23e-09 | 9 |
arterial system endothelium | 3.23e-09 | 9 |
endothelium of artery | 3.23e-09 | 9 |
vessel | 2.30e-08 | 68 |
squamous epithelium | 3.43e-08 | 25 |
vasculature | 4.76e-08 | 78 |
vascular system | 4.76e-08 | 78 |
circulatory system | 9.13e-08 | 112 |
splanchnic layer of lateral plate mesoderm | 1.30e-07 | 83 |
male genital duct | 3.67e-07 | 3 |
internal male genitalia | 3.67e-07 | 3 |
epithelial tube open at both ends | 8.01e-07 | 59 |
blood vessel | 8.01e-07 | 59 |
blood vasculature | 8.01e-07 | 59 |
vascular cord | 8.01e-07 | 59 |
valve | 8.27e-07 | 3 |
cardiac mesenchyme | 8.27e-07 | 3 |
cardial valve | 8.27e-07 | 3 |
tunica intima | 8.27e-07 | 3 |
heart layer | 8.27e-07 | 3 |
endocardium | 8.27e-07 | 3 |
endocardial cushion | 8.27e-07 | 3 |
presumptive endocardium | 8.27e-07 | 3 |
gastrointestinal system | 9.26e-07 | 25 |