FFCP PHASE1:Hg19::chr2:209118956..209118973,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3417 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5382 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-46bp_to_uc002vcs.2_5end | |||
|coexpression_cluster_id=C4177 | |||
|description=CAGE_peak_2_at_IDH1_5end | |||
|id=chr2:209118956..209118973,- | |||
|ontology_enrichment_celltype=CL:0000136!2.55e-07!15;CL:0000066!8.11e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.65e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.86e-09,15;CL:0000066,5.43e-08,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!9.24e-25!239;DOID:162!3.59e-23!235;DOID:0050687!2.19e-19!143;DOID:305!3.24e-16!106;DOID:0050686!3.41e-08!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,2.66e-22,239;DOID:162,1.55e-20,235;DOID:0050687,4.27e-17,143;DOID:305,3.84e-16,106;DOID:0050686,9.05e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0001007!2.35e-08!155;UBERON:0001555!2.35e-08!155;UBERON:0007026!2.35e-08!155;UBERON:0004119!3.32e-08!169;UBERON:0000925!3.32e-08!169;UBERON:0006595!3.32e-08!169;UBERON:0004921!2.09e-07!129;UBERON:0004185!2.09e-07!129 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=1.45342703416445,10.9191267184401,3.66481450649525,2.00146596706261,4.46961094427288,1.74467704820074,7.59899634504932,3.79031924056099,4.17897005119742,0.245733936501509,0,0.436882744260345,0,0.37129905888014,1.32558950291166,0.672325146451775,0.602694528023977,0,0.975865597581014,0.123121058076788,0,0.313454721478088,0,0.273748850145768,0.125542639594803,0.0764134057479513,0,0.0787107813136792,0,0.383829398097213,0.154816123316076,0,0,3.32778609150109,0.0774672005803016,0,1.17440175733939,0,0,0,7.83704159839735,4.85840499028469,5.40908692031792,0,0.377875943688809,0,0,0,0,0.28769239232215,0.512321413058201,0.709446689665756,0,0,0,0,0.545812300115692,0,0,0,0,0,1.99463657621632,1.27867425159808,0.290209238628584,0,0,0.251248665256743,1.0429658368404,0.434377689410233,0,0,0,0,0,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,2.10707267820062,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0.267440195783507,0,0,10.0605128955545,4.34732710268003,2.53007406669196,2.50668955317945,13.9052658202391,0,0.973269740605272,0,0,0.527008714158756,0.785874452986276,0.364295288292542,0.370784442784429,8.11368484136708,7.48757870386849,8.11043559165077,0,0,0,0.993812036833525,0,0,0,0,0,0,0,0,0.66944122552934,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0.872188104285069,2.98183171017191,3.16576279161449,3.17782033951725,7.17091551872034,2.12801029319014,0,0,2.4666754841716,2.17847724779836,13.0669351907597,0.817309515567294,0.454072282934794,0,9.84150013701946,0,0,0,0.822041490506354,2.42809416552197,0,1.22492502752936,0,10.9525328046311,1.18800285728205,1.48360157567134,0,2.15585442544872,0.336672227908132,0.375355559615893,0.554128230968366,0.877955241761676,0.30648779579902,1.35214253015937,0.680593098960126,0.358779271377724,2.56268866582281,2.11931901159562,0,1.03052529238439,1.8034837803194,1.67505170698431,0.337552664482532,1.36411807225678,0,1.28869858099219,3.23292113637624,0.355009592516614,0.302256294682921,0.339121184620975,0.193260853163297,0,0,2.43947412259191,3.44577397635862,3.83440011469411,5.28671380578389,3.28017106138317,1.82488679537915,0,0,0,0.928735856063958,2.16563844500876,1.8929088006375,1.34867752062481,1.20505514941741,1.65440959098591,0.871517776369625,0.949082476444386,2.15730093056263,1.96221465125346,2.30848294167834,0,0,0,0,0,0.982827216677626,1.77236972004421,0,1.96781501668982,0.857839051492628,0.219500570817251,0,0.100528972411631,1.11106134190236,17.5936484867575,1.03993478527958,0,0.231860809950154,2.46558257895225,0.288732895522148,0,0.190254152234598,0,0,1.47730203652438,2.10603838625314,1.63494278517601,0,0.16798212819886,0.141775097242386,1.52249488594842,0.871901815541886,0,5.91195885475132,1.23267807618516,0.414656231081544,0,0.12624243342638,0,0,0,5.13217338068116,0,0,0.285826432630578,0.224262168690721,0,0.1466765716419,2.19761916788222,0,0,0.26593811658487,1.04007436911366,0,0,0,2.7165818795048,1.62786481617433,1.64648067356154,0.325736184293735,4.26470338491055,0.791951872933429,4.52159065589379,4.35766729300147,1.09970290300263,0,1.00451418286425,0,0.718874566474748,6.89171615004683,0,0.723906533337896,0.410952645100767,0,0.448340575974109,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,3.0672872929785,0,10.5793359242897,0.415941723061614,2.14114786556594,2.36553622550902,1.52283839490527,3.61135319673263,4.5481500811197,10.3473071292505,0,0.368738337083406,0.695068915744663,0.195801157462741,0,0,0.215714200818617,0,0,0,0.907170879989041,4.46594054073798,1.84154367945675,1.40330047216537,3.71603532841533,1.02341449813341,0.965123526861645,1.48418066444991,0,0.355123450626254,0.574890092096664,0,0.232420756919918,3.74664293734029,0.200506470303285,40.6077161207303,11.9407026091191,2.00300284807389,5.63834984325524,0.451199612907412,0.616122696835318,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0.509752546090077,0.831076008928724,0,0,0,0.769350375349168,0,16.5942981278795,2.98818933778395,0.183138929636687,0.495056999523528,0,0,0,4.06017016826912,0.462145851343933,0.307007349452259,0.137836572484531,3.6522883255213,0.290033387828457,0.340906509664404,1.51354460599453,11.2393742445465,3.2672311452068,0.510450849978337,16.5898760603102,6.04299214086472,1.5740617341532,0,0,0,0.869932992075073,0.74129687641568,2.00374841438788,0.372158369359667,0,0.190630193923825,0.255897791311334,9.41465773674625,0,0,0.719489830333259,1.37268514868027,1.53156123049392,1.01091240786658,3.17020642346017,0,0.48763373908959,1.46228093778771,1.05650146756755,8.46299450729512,11.5952454202044,0,0,0,1.31535265576129,0,0,0.811641507850816,1.239293992399,0,0.143411352204052,2.16147890228867,0.7133421029625,2.12856638442359,6.12212142363226,2.63435914367922,0,2.79947776195986,2.59799704358883,0.670302275535787,0,2.82431402330337,0.43050537267123,0,0,0.229723400206959,0.507447609232169,0,0,0,0.411362273086194,0,0,0,2.99107399156925,10.5872784078969,0.245040215981032,0.1858031751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| |||
|short_description=p2@IDH1 | |||
}} |
Revision as of 08:09, 21 January 2014
Short description: | p2@IDH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IDH1_5end |
Coexpression cluster: | C4177_lung_bile_mesenchymal_somatostatinoma_testicular_hepatoma_large |
Association with transcript: | -46bp_to_uc002vcs.2_5end |
EntrezGene: | IDH1 |
HGNC: | 5382 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.86e-09 | 15 |
epithelial cell | 5.43e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 2.66e-22 | 239 |
cancer | 1.55e-20 | 235 |
cell type cancer | 4.27e-17 | 143 |
carcinoma | 3.84e-16 | 106 |
organ system cancer | 9.05e-08 | 137 |