FFCP PHASE1:Hg19::chr2:202562774..202562794,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58538 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13680 | |||
|TSSclassifier=strong | |||
|UniProt=E9PG92,F6Q0Y6 | |||
|association_with_transcript=0bp_to_ENST00000396886,ENST00000409143,uc002uyj.3,uc010zhr.1,uc010zhs.1,uc010zht.1_5end | |||
|description=CAGE_peak_2_at_MPP4_5end | |||
|id=chr2:202562774..202562794,- | |||
|ontology_enrichment_celltype=CL:0000055!2.68e-38!180;CL:0000680!1.15e-23!57;CL:0000056!1.15e-23!57;CL:0000355!1.15e-23!57;CL:0000222!2.21e-22!119;CL:0000183!4.30e-22!59;CL:0000187!3.35e-21!54;CL:0000359!3.36e-19!32;CL:0000192!2.59e-18!42;CL:0000514!2.59e-18!42;CL:0000393!3.82e-18!60;CL:0000211!3.82e-18!60;CL:0002371!4.87e-17!591;CL:0000057!9.44e-17!75;CL:0000144!3.42e-15!625;CL:0000220!5.88e-13!246;CL:0002321!1.36e-12!248;CL:0002620!3.59e-12!23;CL:0000048!1.16e-11!430;CL:0000723!3.66e-11!436;CL:0000548!1.04e-10!679;CL:0000004!1.04e-10!679;CL:0000255!1.04e-10!679;CL:0000012!2.35e-10!682;CL:0000034!3.71e-10!444;CL:0002139!7.09e-10!24;CL:0002539!2.37e-09!10;CL:0000071!3.57e-08!18;CL:0002546!3.57e-08!18;CL:0000115!8.85e-08!35;CL:1000413!1.82e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.99e-22;32!CL:0000192;1.28e-15;43!CL:0002539;2.67e-15;10!CL:0000187;3.11e-10;55!CL:0000393;3.53e-08;61!CL:0000211;3.53e-08;61!CL:1000413;6.07e-08;9!CL:0000056;1.25e-07;4!CL:0002620;3.00e-07;23!CL:0002139;3.93e-07;24!CL:0002594;4.20e-07;4!CL:0000071;6.80e-07;18!CL:0002544;6.99e-07;6!CL:0000708;7.98e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.09e-23,32;CL:0000680,2.80e-23,58;CL:0000056,2.80e-23,58;CL:0000355,2.80e-23,58;CL:0000192,3.00e-20,43;CL:0000514,3.00e-20,43;CL:0000187,1.07e-19,55;CL:0000222,2.24e-18,121;CL:0000393,7.61e-17,61;CL:0000211,7.61e-17,61;CL:0002539,1.94e-15,10;CL:0000048,7.54e-11,427;CL:0000723,2.24e-10,433;CL:0000034,9.08e-10,441;CL:0000057,7.52e-09,76;CL:1000413,4.68e-08,9;CL:0000515,1.63e-07,4;CL:0002594,1.86e-07,4;CL:0002321,2.60e-07,250;CL:0002620,3.41e-07,23;CL:0002139,3.50e-07,24;CL:0002544,4.86e-07,6;CL:0000071,5.24e-07,18;CL:0002546,5.24e-07,18;CL:0002556,5.26e-07,6;CL:0000708,7.82e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000514;1.28e-15;43!CL:0000355;1.72e-11;58!CL:0000515;1.25e-07;4!CL:0002546;6.80e-07;18 | |||
|ontology_enrichment_disease=DOID:2394!4.86e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.54e-30!83;UBERON:0002329!5.54e-30!83;UBERON:0003077!5.54e-30!83;UBERON:0003059!5.54e-30!83;UBERON:0007282!5.54e-30!83;UBERON:0009618!5.54e-30!83;UBERON:0007285!5.54e-30!83;UBERON:0002049!7.35e-28!79;UBERON:0007798!7.35e-28!79;UBERON:0001981!1.57e-24!60;UBERON:0007500!1.57e-24!60;UBERON:0004537!1.57e-24!60;UBERON:0006965!1.57e-24!60;UBERON:0004290!1.87e-24!70;UBERON:0000055!2.68e-24!69;UBERON:0001637!2.58e-23!42;UBERON:0003509!2.58e-23!42;UBERON:0004572!2.58e-23!42;UBERON:0004872!1.49e-22!84;UBERON:0000486!3.77e-21!82;UBERON:0001134!7.13e-21!61;UBERON:0002036!7.13e-21!61;UBERON:0003082!7.13e-21!61;UBERON:0004535!2.39e-20!110;UBERON:0002385!1.27e-19!63;UBERON:0001015!1.27e-19!63;UBERON:0000383!1.27e-19!63;UBERON:0001009!3.88e-19!113;UBERON:0005256!1.61e-18!143;UBERON:0000490!1.91e-18!138;UBERON:0004573!3.41e-17!33;UBERON:0004571!3.41e-17!33;UBERON:0003914!7.60e-15!118;UBERON:0000947!4.10e-13!21;UBERON:0010191!4.10e-13!21;UBERON:0002100!5.29e-12!216;UBERON:0000475!1.19e-10!365;UBERON:0004237!2.37e-09!10;UBERON:0004695!2.37e-09!10;UBERON:0002111!2.37e-09!10;UBERON:0004178!2.37e-09!10;UBERON:0002199!2.50e-09!45;UBERON:0002416!2.50e-09!45;UBERON:0000119!2.58e-09!312;UBERON:0002097!1.15e-08!40;UBERON:0003102!2.35e-08!95;UBERON:0000483!3.00e-08!309;UBERON:0001986!3.57e-08!18;UBERON:0004638!3.57e-08!18;UBERON:0004852!3.57e-08!18;UBERON:0001135!9.74e-08!15;UBERON:0003915!1.82e-07!9;UBERON:0004700!1.82e-07!9;UBERON:0001917!1.82e-07!9;UBERON:0003104!3.73e-07!238;UBERON:0009142!3.73e-07!238;UBERON:0000487!6.76e-07!22;UBERON:0000477!9.68e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.33e-20;42!UBERON:0003509;2.33e-20;42!UBERON:0004572;2.33e-20;42!UBERON:0000947;6.36e-19;21!UBERON:0010191;6.36e-19;21!UBERON:0004573;1.28e-18;33!UBERON:0004571;1.28e-18;33!UBERON:0007500;1.53e-15;56!UBERON:0001981;1.53e-15;56!UBERON:0004537;1.53e-15;56!UBERON:0004237;2.67e-15;10!UBERON:0004695;2.67e-15;10!UBERON:0002111;2.67e-15;10!UBERON:0004178;2.67e-15;10!UBERON:0002385;2.21e-14;31!UBERON:0001015;2.21e-14;31!UBERON:0000383;2.21e-14;31!UBERON:0001135;1.26e-13;15!UBERON:0000055;3.34e-12;65!UBERON:0002049;4.55e-11;75!UBERON:0007798;4.55e-11;75!UBERON:0003914;6.62e-10;74!UBERON:0003915;6.07e-08;9!UBERON:0004700;6.07e-08;9!UBERON:0001917;6.07e-08;9!UBERON:0001310;4.20e-07;4!UBERON:0004638;6.80e-07;18!UBERON:0001986;6.80e-07;18!UBERON:0004852;6.80e-07;18!UBERON:0003210;7.98e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,5.85e-29,42;UBERON:0003509,5.85e-29,42;UBERON:0004572,5.85e-29,42;UBERON:0002329,3.50e-26,71;UBERON:0003059,3.50e-26,71;UBERON:0007282,3.50e-26,71;UBERON:0004290,3.50e-26,71;UBERON:0009618,3.50e-26,71;UBERON:0003077,1.21e-25,72;UBERON:0007285,1.21e-25,72;UBERON:0007500,2.46e-25,59;UBERON:0001981,2.46e-25,59;UBERON:0004537,2.46e-25,59;UBERON:0006965,2.46e-25,59;UBERON:0007503,2.60e-25,78;UBERON:0007524,4.05e-25,73;UBERON:0000055,1.13e-23,68;UBERON:0002049,2.01e-23,78;UBERON:0007798,2.01e-23,78;UBERON:0000490,8.42e-22,148;UBERON:0001134,4.27e-21,62;UBERON:0002036,4.27e-21,62;UBERON:0003082,4.27e-21,62;UBERON:0000486,1.33e-20,83;UBERON:0004573,1.77e-20,33;UBERON:0004571,1.77e-20,33;UBERON:0002385,4.13e-20,64;UBERON:0001015,4.13e-20,64;UBERON:0000383,4.13e-20,64;UBERON:0000947,3.97e-19,21;UBERON:0010191,3.97e-19,21;UBERON:0004872,2.10e-17,83;UBERON:0004237,1.94e-15,10;UBERON:0004695,1.94e-15,10;UBERON:0002111,1.94e-15,10;UBERON:0004178,1.94e-15,10;UBERON:0004535,2.38e-14,109;UBERON:0005256,3.78e-14,122;UBERON:0001135,9.37e-14,15;UBERON:0001009,1.18e-13,112;UBERON:0003914,2.98e-11,117;UBERON:0000926,6.15e-09,315;UBERON:0004120,6.15e-09,315;UBERON:0006603,6.15e-09,315;UBERON:0003104,1.45e-08,160;UBERON:0009142,1.45e-08,160;UBERON:0003915,4.68e-08,9;UBERON:0004700,4.68e-08,9;UBERON:0001917,4.68e-08,9;UBERON:0001310,1.86e-07,4;UBERON:0004638,5.24e-07,18;UBERON:0001986,5.24e-07,18;UBERON:0004852,5.24e-07,18;UBERON:0001758,5.26e-07,6;UBERON:0003672,5.26e-07,6;UBERON:0003210,7.82e-07,3;UBERON:0000119,8.89e-07,309 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0,0,0.446961094427288,0,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0.331397375727916,4.70627602516243,3.61616716814386,2.92124036154949,1.95173119516203,0.984968464614303,2.24400760368678,0.313454721478088,0.286235987131057,0.273748850145768,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,1.50401373190767,1.01392563272577,1.5905718941022,0,0.567208902984407,0.221729397462564,0.43917392846563,0,0,0,0,0,0,0,0,0,3.18019851786728,2.58070378531837,2.08284300964557,0.56530794192401,0.838998872419812,1.10047216776027,1.67195973229448,2.06733407335463,0.71153252537342,3.3472061276467,1.61131726843659,0.760272105718513,0,1.83831540172934,1.62028389576352,1.51809538082936,0.673588117878509,0.900891843866578,0,0,2.19842092716489,0,0,0,0,0.633152558322899,2.64818361626438,1.14734648299525,0,0,0,0.24666754841716,0.311211035399766,0.538842688278752,0.653847612453835,0.756787138224657,0,0.70296429550139,0,3.4228309292667,0.597794722207204,2.81842796745036,1.61872944368132,1.54495887372473,2.85815839756851,1.96534907698829,0.413303124703062,0,0.247266929278557,0,0,1.68336113954066,1.7516592782075,4.43302584774693,1.75591048352335,2.45190236639216,0.300476117813194,1.36118619792025,1.79389635688862,1.06778694409284,0.423863802319124,0.900273288253207,0.92747276314595,0.772921620136887,0.558350568994769,1.35021065793013,0.194874010322397,1.00973509697646,1.10459878370759,0.161646056818812,1.42003837006646,0.403008392910561,0.508681776931463,0.386521706326594,0.272746120590835,0.860413786167011,0,0,0,0,0,0,3.12899064659632,0,4.14404764057442,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0.738155454624648,1.40241773803446,0,0,0,0,0,0,0,2.40194934417936,0,0,0.100528972411631,0,0,0,1.44331342025273,0,0.234817388471643,0.288732895522148,0,0.380508304469197,0,0,0,0,0,0.93733833986777,0.335964256397719,0.850650583454319,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,12.2222881936443,3.48768055066624,18.9946160276261,0.387815147273333,0,3.381211010224,0,1.04007436911366,0,0,0.532844358032199,0.142977993658148,0,0,2.60588947434988,0.355391948742546,0,0,0,0,0,0,0,0.718874566474748,0,1.42636905040718,5.64647096003559,2.05476322550383,11.4599016473533,0,0,0,0,0.76228387266739,0,0,0.167516265334349,0,0,0,0,0.49076596687656,0.500170521059677,1.08506009479894,0.415941723061614,1.07057393278297,0.473107245101804,1.05427273493442,0.300946099727719,0,0,1.99267679560631,1.47495334833363,1.21637060255316,0,0.343143423810856,0,0,0,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0.561320188866147,0.128139149255701,0.511707249066704,0,0,2.15893571323718,2.13074070375753,3.53146770859379,1.55776328755086,0.581051892299796,0,0,0,0.34444334449382,1.45672934405374,0.524497659837696,0.451199612907412,0.0770153371044148,0,0,0,1.13733384070897,0.510281115829547,0,0,1.08378575017541,0.501689773854853,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,2.03008508413456,0.462145851343933,0.460511024178389,2.34322173223702,0.859361958946189,0.145016693914229,1.70453254832202,0.0890320356467374,0,0,0.127612712494584,0,1.39453664789186,2.51849877464512,1.3940745403212,2.7723022215848,1.06461206063404,3.47973196830029,11.675425803547,1.14499909393593,1.48863347743867,3.79655309662471,0.190630193923825,0.511795582622668,0,1.59101623962968,0,2.87795932133304,0,1.29593642580255,3.03273722359974,0,0.842516912477962,0,0.731140468893853,1.05650146756755,0.136499911407986,0.141405431953713,1.13008116620243,0.551365343546124,0.66343897524122,1.75380354101505,0,0,2.43492452355245,2.78841148289775,1.97186921772569,1.29070216983646,0.196498082026242,2.85336841185,1.06428319221179,0.422215270595328,0,0,0.349934720244983,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961416640147258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70481688083848,0,0,0,0,0,10.3517095671302,0,0,0,0,0,0.306806047506464,0,1.24415835064723,0,0,0,0,0,13.3364388173564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0.227884111694002,0,0,0,0,2.10674464824283,0,0,0,0,0,0,0,0,0,0,0,0,0.432777279484182,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10939738410511,0,0,0,0.17472666824203,0.343972064943233,0,0,0,0.0969890164884194,0,0,3.83717389010903,1.78843150532691,0,0,0,0.213452994739353,0,0,0,0,0,0,0,1.22313785466253,1.255234155748,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.896436696664224,0.191915197319445,0,0,0,0,1.72844298240254,1.95952416065645,2.39460383124975,0,7.15629691498771,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,2.68658645196373,1.16856654923612,0.554805861502613,1.13641803165053,0.251567901752575,0.889811221596536,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| |||
|short_description=p2@MPP4 | |||
}} |
Revision as of 07:57, 21 January 2014
Short description: | p2@MPP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MPP4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000396886, ENST00000409143, uc002uyj.3, uc010zhr.1, uc010zhs.1, uc010zht.1_5end |
EntrezGene: | MPP4 |
HGNC: | 13680 |
UniProt: | E9PG92F6Q0Y6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.09e-23 | 32 |
muscle precursor cell | 2.80e-23 | 58 |
myoblast | 2.80e-23 | 58 |
multi-potent skeletal muscle stem cell | 2.80e-23 | 58 |
smooth muscle cell | 3.00e-20 | 43 |
smooth muscle myoblast | 3.00e-20 | 43 |
muscle cell | 1.07e-19 | 55 |
mesodermal cell | 2.24e-18 | 121 |
electrically responsive cell | 7.61e-17 | 61 |
electrically active cell | 7.61e-17 | 61 |
aortic smooth muscle cell | 1.94e-15 | 10 |
multi fate stem cell | 7.54e-11 | 427 |
somatic stem cell | 2.24e-10 | 433 |
stem cell | 9.08e-10 | 441 |
fibroblast | 7.52e-09 | 76 |
endothelial cell of artery | 4.68e-08 | 9 |
skeletal muscle myoblast | 1.63e-07 | 4 |
smooth muscle cell of the umbilical artery | 1.86e-07 | 4 |
embryonic cell | 2.60e-07 | 250 |
skin fibroblast | 3.41e-07 | 23 |
endothelial cell of vascular tree | 3.50e-07 | 24 |
aortic endothelial cell | 4.86e-07 | 6 |
blood vessel endothelial cell | 5.24e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.24e-07 | 18 |
fibroblast of periodontium | 5.26e-07 | 6 |
leptomeningeal cell | 7.82e-07 | 3 |