FFCP PHASE1:Hg19::chr2:188415716..188415740,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C4160 | |||
|description=CAGE_peak_at_chr2:188415716..188415740,- | |||
|id=chr2:188415716..188415740,- | |||
|ontology_enrichment_celltype=CL:0002139!5.40e-12!24;CL:0000115!7.58e-09!35;CL:0000222!9.86e-09!119;CL:0000071!3.17e-08!18;CL:0002546!3.17e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0002195;2.33e-13;2!CL:0002571;2.33e-13;2!CL:0002144;8.23e-09;3!CL:0000222;3.20e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002195,2.64e-13,2;CL:0002571,2.64e-13,2;CL:0002144,8.57e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;7.74e-08;1!DOID:4549;7.74e-08;1!DOID:5861;7.74e-08;1!DOID:6496;7.74e-08;1!DOID:5662;1.61e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,7.03e-08,1;DOID:4549,7.03e-08,1;DOID:5861,7.03e-08,1;DOID:6496,7.03e-08,1;DOID:5662,1.72e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000477!1.61e-12!286;UBERON:0004921!3.56e-12!129;UBERON:0004185!3.56e-12!129;UBERON:0000490!1.16e-11!138;UBERON:0003914!3.05e-11!118;UBERON:0000119!4.22e-11!312;UBERON:0000483!5.06e-11!309;UBERON:0004111!5.97e-11!241;UBERON:0003104!1.84e-10!238;UBERON:0009142!1.84e-10!238;UBERON:0001007!6.09e-10!155;UBERON:0001555!6.09e-10!155;UBERON:0007026!6.09e-10!155;UBERON:0001009!8.07e-10!113;UBERON:0000926!1.85e-09!448;UBERON:0004120!1.85e-09!448;UBERON:0006603!1.85e-09!448;UBERON:0002100!2.07e-09!216;UBERON:0000481!2.12e-09!347;UBERON:0000055!2.62e-09!69;UBERON:0004535!4.15e-09!110;UBERON:0004119!4.21e-09!169;UBERON:0000925!4.21e-09!169;UBERON:0006595!4.21e-09!169;UBERON:0000025!5.98e-09!194;UBERON:0000468!6.58e-09!659;UBERON:0002049!1.92e-08!79;UBERON:0007798!1.92e-08!79;UBERON:0004872!2.53e-08!84;UBERON:0001986!3.17e-08!18;UBERON:0004638!3.17e-08!18;UBERON:0004852!3.17e-08!18;UBERON:0000077!4.06e-08!130;UBERON:0000467!4.71e-08!625;UBERON:0000480!5.55e-08!626;UBERON:0001041!1.78e-07!98;UBERON:0000487!2.95e-07!22;UBERON:0001048!4.17e-07!168;UBERON:0000922!4.37e-07!612;UBERON:0002108!4.41e-07!14;UBERON:0005911!4.60e-07!82;UBERON:0000160!4.79e-07!27;UBERON:0000923!7.61e-07!604;UBERON:0005291!7.61e-07!604;UBERON:0006598!7.61e-07!604;UBERON:0002532!7.61e-07!604;UBERON:0002050!8.86e-07!605;UBERON:0005423!8.86e-07!605;UBERON:0005177!9.24e-07!107;UBERON:0005157!9.83e-07!51 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;8.23e-09;3!UBERON:0001915;8.23e-09;3!UBERON:0001982;8.23e-09;3!UBERON:0002171;1.61e-07;1!UBERON:0006518;1.61e-07;1!UBERON:0008949;1.61e-07;1!UBERON:0000101;1.61e-07;1!UBERON:0002167;1.61e-07;1!UBERON:0001473;2.49e-07;8!UBERON:0004536;2.49e-07;8!UBERON:0006558;2.49e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,8.57e-09,3;UBERON:0001915,8.57e-09,3;UBERON:0001982,8.57e-09,3;UBERON:0002171,1.33e-07,1;UBERON:0006518,1.33e-07,1;UBERON:0008949,1.33e-07,1;UBERON:0000101,1.33e-07,1;UBERON:0002167,1.33e-07,1;UBERON:0001473,2.30e-07,8;UBERON:0004536,2.30e-07,8;UBERON:0006558,2.30e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.02420515822182,0.639312809217652,0,0,0,0,0,0.189069634328136,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0.56530794192401,0,0.550236083880135,0,0.258416759169329,0,1.33888245105868,0.805658634218294,1.52054421143703,1.22031028774085,1.10298924103761,0,0.803697554556718,0.44905874525234,0.450445921933289,0,0,0.366403487860815,0,0,0,0,0,1.72131935057184,0,0,0,0,0,0,0.269421344139376,0.163461903113459,0,0,0,0.624320153660641,0.570471821544449,0.149448680551801,0.117434498643765,0,0,0,0,0,0,0,3.64064544775211,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0.236613600079688,0.505754070234305,0.482022059766964,0,0,0.474541238222193,0.134831308160164,0.392442930250692,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0.288732895522148,0.462985512576611,1.52203321787679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0.771622122786426,0,0,2.7165818795048,0,0,0,2.13235169245527,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0.271265023699736,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.918515585316854,0,0.393373244878272,0.451199612907412,0,0,0,0,1.13733384070897,0.170093705276516,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0.170453254832202,0,0,0,0,0,0,0.31481234683064,0,0,0.532306030317022,0,0,0.143124886741991,0,0,0.762520775695299,0,0,0,0,0.719489830333259,0.274537029736055,0.235624804691373,0.404364963146632,0,0,0,0.974853958525138,1.05650146756755,0.136499911407986,1.41405431953713,0,0,0,0.438450885253763,0,0.655894752046633,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,1.52927441428475,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,5.70394452222713,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.789147245095469,0,0,0,0,0,0,0,1.44999915086959,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.461701551022782,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0.995261931078505,0.796118080530053,0,0,0,0,0,0,0,0,0,3.15614493394321,0,0,0,0.189559738885464,0,0,0.664653872707185,5.62686324988348,0.941798755221676,0,0,1.52542140314453,0,0,0,0,0,0,0,0.0821154570532092,0.0969890164884194,5.82490436163902,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0,0,6.83388945609879,0,2.71808412147228,3.55649677461933,0,0,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0,0.429226048136571,0.223171457441873,0.335917362433631,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0.688992370603241,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0.211200673038813,4.84075816198681,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0,0.342173675768659,0,5.55294545352012,1.72924735609633,2.89967338743037,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.499921631848426,0,0,0,0,0,0,0,0,0.189403005275089,0,0.889811221596536,0,0.151230923763239,0,0.147855149989634,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,3.60024988196838,0,0,1.26184898228651,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0.675769762612291,0,0,2.43087964941906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0.49131575253029,0.591424344868181,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0.443511850813194,0,2.40083213212386,0,0,0.590969204419841,0.111231401892069,0.078493092850514,0,0,0,0,0,0,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,0.771741581079447,0.218559560503957,0,0.735444965261716,0,0.196308467114945,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0.401206833445841,0,0,0.143339583151451,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0.476128862927481,0,0.0620747142958579,0,0.0636471582781649,0.404234377916439,0.217716747896961,0,0,0.430333232356058,0,0,2.34800160930974,0,0.449126010532934,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr2:188415716..188415740,- | |||
}} |
Revision as of 07:28, 21 January 2014
Short description: | p@chr2:188415716..188415740, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:188415716..188415740, - |
Coexpression cluster: | C4160_giant_embryonic_large_extraskeletal_pleomorphic_glioblastoma_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stem cell | 2.64e-13 | 2 |
hepatic mesenchymal stem cell | 2.64e-13 | 2 |
capillary endothelial cell | 8.57e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 8.57e-09 | 3 |
endothelium of capillary | 8.57e-09 | 3 |
capillary | 8.57e-09 | 3 |
lower lobe of right lung | 1.33e-07 | 1 |
right lung lobe | 1.33e-07 | 1 |
lower lobe of lung | 1.33e-07 | 1 |
lobe of lung | 1.33e-07 | 1 |
right lung | 1.33e-07 | 1 |
lymphatic vessel | 2.30e-07 | 8 |
lymph vasculature | 2.30e-07 | 8 |
lymphatic part of lymphoid system | 2.30e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 7.03e-08 | 1 |
extraosseous chondrosarcoma | 7.03e-08 | 1 |
myxoid chondrosarcoma | 7.03e-08 | 1 |
extraskeletal myxoid chondrosarcoma | 7.03e-08 | 1 |
pleomorphic carcinoma | 1.72e-07 | 1 |