FFCP PHASE1:Hg19::chr2:175629374..175629385,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1134 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1955 | |||
|TSSclassifier=not | |||
|UniProt=P02708,Q53SH4 | |||
|association_with_transcript=-174bp_to_ENST00000348749,NM_000079,NM_001039523,uc002ujd.2,uc002uje.2,uc002ujf.3_5end | |||
|coexpression_cluster_id=C315 | |||
|description=CAGE_peak_5_at_CHRNA1_5end | |||
|id=chr2:175629374..175629385,- | |||
|ontology_enrichment_celltype=CL:0002556!1.64e-11!6;CL:0000515!2.89e-10!4;CL:0000055!1.16e-07!180;CL:0002144!6.52e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002262;2.05e-15;2!CL:1000398;2.05e-15;2!CL:0002582;9.90e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,2.05e-15,2;CL:1000398,2.05e-15,2;CL:0002582,1.20e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0009847;9.90e-11;3!UBERON:0003353;9.90e-11;3 | |||
|ontology_enrichment_disease=DOID:2394!2.05e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3371;9.98e-30;1!DOID:4549;9.98e-30;1!DOID:5861;9.98e-30;1!DOID:6496;9.98e-30;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,9.99e-30,1;DOID:4549,9.99e-30,1;DOID:5861,9.99e-30,1;DOID:6496,9.99e-30,1 | |||
|ontology_enrichment_uberon=UBERON:0001758!1.64e-11!6;UBERON:0003672!1.64e-11!6;UBERON:0002118!3.37e-08!5;UBERON:0004532!3.37e-08!5;UBERON:0001915!6.52e-07!3;UBERON:0001982!6.52e-07!3;UBERON:0000914!8.07e-07!83;UBERON:0002329!8.07e-07!83;UBERON:0003077!8.07e-07!83;UBERON:0003059!8.07e-07!83;UBERON:0007282!8.07e-07!83;UBERON:0009618!8.07e-07!83;UBERON:0007285!8.07e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;2.05e-15;2!UBERON:0003497;2.05e-15;2!UBERON:0003909;2.05e-15;2!UBERON:0003835;2.05e-15;2!UBERON:0002418;7.42e-11;3!UBERON:0004755;7.42e-11;3!UBERON:0001280;9.90e-11;3!UBERON:0004647;9.90e-11;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,2.05e-15,2;UBERON:0003497,2.05e-15,2;UBERON:0003909,2.05e-15,2;UBERON:0003835,2.05e-15,2;UBERON:0002418,7.42e-11,3;UBERON:0004755,7.42e-11,3;UBERON:0001280,9.90e-11,3;UBERON:0004647,9.90e-11,3;UBERON:0005171,9.90e-11,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.732186172644509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0.125118519871964,0,1.75591048352335,0.30648779579902,0.150238058906597,0,0,0,0,0,0,0.257640540045629,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352226082707465,0.433099343283221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3703752027992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0,0.164254312027618,1.03850885836724,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0.0852266274161009,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.88326957442601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0.422401346077626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,1.06336685823198,0,0,0,0,0.363697318405119,0.107410557042488,0,0.398095888698616,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89093383216518,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p5@CHRNA1 | |||
}} |
Revision as of 06:43, 21 January 2014
Short description: | p5@CHRNA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CHRNA1_5end |
Coexpression cluster: | C315_Osteoblast_Preadipocyte_mesenchymal_Smooth_Cardiac_leiomyoma_Adipocyte |
Association with transcript: | -174bp_to_ENST00000348749, NM_000079, NM_001039523, uc002ujd.2, uc002uje.2, uc002ujf.3_5end |
EntrezGene: | CHRNA1 |
HGNC: | 1955 |
UniProt: | P02708Q53SH4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 2.05e-15 | 2 |
endothelial cell of hepatic sinusoid | 2.05e-15 | 2 |
visceral preadipocyte | 1.20e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 2.05e-15 | 2 |
abdomen blood vessel | 2.05e-15 | 2 |
sinusoid | 2.05e-15 | 2 |
abdominal segment blood vessel | 2.05e-15 | 2 |
cartilage tissue | 7.42e-11 | 3 |
skeletal tissue | 7.42e-11 | 3 |
liver parenchyma | 9.90e-11 | 3 |
liver lobule | 9.90e-11 | 3 |
hepatic duct | 9.90e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 9.99e-30 | 1 |
extraosseous chondrosarcoma | 9.99e-30 | 1 |
myxoid chondrosarcoma | 9.99e-30 | 1 |
extraskeletal myxoid chondrosarcoma | 9.99e-30 | 1 |