FFCP PHASE1:Hg19::chr2:136633940..136634022,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4175 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6949 | |||
|TSSclassifier=strong | |||
|UniProt=Q14566 | |||
|association_with_transcript=0bp_to_ENST00000264156,NM_005915,uc002tuw.2_5end | |||
|coexpression_cluster_id=C109 | |||
|description=CAGE_peak_1_at_MCM6_5end | |||
|id=chr2:136633940..136634022,- | |||
|ontology_enrichment_celltype=CL:0000542!8.68e-07!53;CL:0000051!8.68e-07!53 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,8.68e-07,53;CL:0000051,8.68e-07,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.22e-46!235;DOID:14566!9.57e-45!239;DOID:2531!1.11e-24!51;DOID:0060083!1.11e-24!51;DOID:0050687!3.90e-23!143;DOID:0050686!9.07e-22!137;DOID:1240!7.54e-21!39;DOID:305!1.36e-18!106;DOID:8692!2.88e-16!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.97e-16;39!DOID:8692;9.25e-16;31!DOID:2531;3.21e-15;51!DOID:0060083;3.21e-15;51 | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.22e-46,235;DOID:14566,9.57e-45,239;DOID:2531,1.11e-24,51;DOID:0060083,1.11e-24,51;DOID:0050687,3.90e-23,143;DOID:0050686,9.07e-22,137;DOID:1240,7.54e-21,39;DOID:305,1.36e-18,106;DOID:8692,2.88e-16,31 | |||
|ontology_enrichment_uberon=UBERON:0001557!1.56e-07!19;UBERON:0001737!5.80e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.58e-07;9!UBERON:0001557;5.58e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001557,1.56e-07,19;UBERON:0001737,5.80e-07,9 | |||
|phase1_expression=14.352591962374,10.4909256706582,10.5715803071978,7.00513088471913,5.36353313312745,1.74467704820074,15.1979926900986,16.4247167090976,9.14149698699435,4.91467873003018,2.79120467188971,9.17453762946723,3.4289707169699,9.90130823680373,6.62794751455832,4.70627602516243,10.2458069764076,9.49403117503585,3.90346239032406,6.89477925230012,4.08001382488506,5.64218498660558,39.2143302369548,48.1797976256552,55.364304061308,74.9615510387402,74.136832273301,79.9701538146981,11.4075640286182,33.3931576344575,8.20525453575203,14.7107395916628,14.7590900201343,3.69754010166788,94.5874519085483,65.8243546416762,78.9785181810739,8.30993112797816,7.62068900386538,11.0675544065084,20.824139104313,21.3769819572526,17.5151385991247,2.32637182047304,2.64513160582167,1.69808842831471,2.32429036905685,4.52284676824008,3.71647645074124,0.863077176966451,2.30544635876191,2.83778675866302,4.82643953031266,2.5819387343353,4.06279459783025,2.07066573496865,2.45615535052061,3.82029923556644,0.918251677112708,5.45579346029359,4.47535988059329,2.30895910130701,1.39624560335142,1.70489900213078,2.03146467040009,1.70215567407342,3.11411124497787,4.01997864410789,4.69334626578181,1.95469960234605,3.02699751316684,2.94622108790052,1.89877432464531,9.92899845666126,6.59073329891635,7.33805259279316,3.48218756554135,3.60424542819615,4.33959084082116,10.2604587746849,10.1447505371536,6.39324538176219,8.79981222306614,6.55366333514558,8.89509253863555,5.9742231159311,4.80475184443215,4.59801951963587,8.59358334620321,6.67837628174755,9.10740750575117,18.79159005987,19.8782078625119,35.686258716337,11.2101712596307,63.2121803460185,37.3748563216283,37.3360224611706,41.5315027979009,17.8889550068026,39.762516529298,39.7696156817176,25.3274746930285,28.5210769626044,34.7634970820308,30.3501435579561,31.6840520605068,29.589094856631,29.2633532009726,24.3368098813441,23.766101529583,26.3720808018898,33.6610498377877,27.2891644651507,22.9978152370949,38.5251765171725,42.1542542962113,39.1735287850198,32.3865205784964,17.5210977878253,13.6727525309848,24.7117531556577,9.33565738282191,8.44711633619161,28.7340671070395,15.1537441308171,22.1704559168683,37.4988542398002,42.5229911295777,36.7853985862309,9.75227465255847,18.7796240717018,15.5992325449107,15.1804444001518,16.5441510509844,13.6155727823174,34.1972957231973,8.75942766544745,35.3560216193614,28.1596334777456,21.0803485663502,12.8359493987758,1.82147644146271,5.56176664176644,12.332800958878,11.8408221363502,15.6890393412261,26.472459297893,26.3117658958859,26.0020250930695,26.6341625871385,24.0865686629715,19.4398680900253,11.8714667804042,10.4874859052476,17.0573186002842,27.587335582859,6.46041897923322,10.3172216179146,10.0416183829401,6.0424397566372,8.36299316290364,6.10155143870424,12.1328816514137,13.7724131139899,48.9362510996757,38.8435814643274,42.7923625836624,18.397996495906,22.7823758296351,27.8466650774219,17.1314542666882,11.6334079244498,3.05265836499774,4.96971951695318,24.6929497745931,7.54732330635347,8.3182620017156,22.6987764606949,19.6237160049807,16.0123493594557,8.14002909776628,24.8968828319813,12.1239604862719,21.5769712109766,4.38936540170301,13.82822218752,2.81185718200556,19.0417646866496,35.9397247573003,23.1645454855292,41.5718125198928,39.335125481456,39.0453242632251,17.5572587279208,45.0801944534188,11.6758132728615,15.4440371446667,14.5887488274349,0,3.59309070908119,50.3324980722658,59.431296939183,33.5247579735861,29.850478219897,19.9217067269363,19.9816618345774,35.2774089627665,19.7328599257748,11.3185416073841,19.0738711043606,22.2067411102458,14.0151439764277,12.6243864622358,11.9114788052217,35.4430297706659,15.0052987948246,23.9812085531909,13.8074847963449,9.05217918185347,12.7803453305981,13.2992769660485,23.7384829234683,9.66304265816484,9.54611422067921,10.6117700293931,50.0092195131341,71.9636641985665,54.8435410344127,44.78157576664,61.5662876136533,74.0904038923935,14.0804579096834,7.71889125831462,13.8134921352481,10.6804623447355,13.7157101517221,72.0488412242649,78.0547115061611,79.0516178017821,77.5366628308729,73.4253726591409,89.6882940239945,74.0223881799303,75.5452640732582,81.9511444295811,2.21446636387394,1.40241773803446,5.3504621473082,2.94017422771084,5.07020139287323,5.89696330006576,2.36315962672562,87.8511567835155,44.8907800682364,18.3577557019422,5.92651541206578,10.1161577931858,24.9311851580844,20.0916925994009,0.977424915930974,8.31947828223663,33.1962086658129,17.2736303412864,10.3319650927523,17.4683401790899,12.5006088395685,16.55211124441,26.8669495306154,24.0376125386564,31.5157767791869,29.7185416726832,27.9426585102809,3.74935335947108,8.56708853814184,9.49893151523989,14.5980392005643,21.2162775115192,22.2361953915822,10.3459279958148,13.8236041400765,8.29312462163088,7.06187771743111,7.70078843900918,45.7184838903617,11.0776643411901,14.0660936652056,13.6857956818164,58.0975333773778,33.9387655363627,13.7196687662678,8.63409349459278,15.6945624779981,58.5239520851181,7.10994436667778,0,25.35908257668,9.57377219705534,13.5209667984776,10.0310875962235,8.5109479213967,10.1240428026118,10.7233495243611,9.76718889704597,9.87888404136923,31.922146060786,11.3725423597615,45.9332086301389,6.63166629531089,3.48613383440118,7.59794732983634,13.378615870531,15.0677127429638,18.9750545534728,12.9397421965455,12.6348129417525,28.5273810081437,21.5724146934693,17.670963739333,26.8591444859843,81.5979848272879,27.5843064282698,40.9692392233083,29.9039274531814,34.556868894255,28.6307678486768,32.4781301366632,26.9701187188302,18.5002237979417,2.99602809578873,0,7.87389475528467,11.7783832050374,9.50323990013386,4.34024037919577,5.40724239980099,9.99202337264106,8.2005255817646,8.19989904948992,9.02838299183157,20.4666753650386,11.3820378421755,37.8608591165199,22.8617768991712,28.2371747021269,1.37060810223918,1.37257369524342,18.8158903771828,13.8057088523915,24.5473382947922,9.09382714338778,14.9791895559447,21.4697108264073,9.42809669711352,33.1477862302215,15.436305193819,9.35415789566617,13.816095724801,9.81208918976006,7.42090332224955,31.767196923347,25.0362032691509,30.7155563491646,8.30807086693794,20.9178681227927,58.3751141527535,2.80709058424599,2.85451065701279,28.4739831448225,15.4777492805709,9.30983346211911,6.76799419361118,28.7267207399467,10.980896768476,8.76835347919564,23.0102550986469,5.68666920354483,4.93271745301895,33.6828829119337,6.16909010761157,6.23176806350862,3.51182841698397,9.17554582962138,3.3243040357149,11.6414872455533,62.2698049674454,57.5157992254781,38.211068642342,6.23227826829441,7.15832468261467,6.80070676874967,29.4853676715066,40.7596929607705,9.76251414593493,7.80072295243825,9.64103579064957,12.8572055328522,30.6556748058142,29.626209222143,31.702411671442,20.5172667698403,29.8734389463311,51.8177894689893,21.1005924482768,5.61968712227326,5.18913181885787,11.7403695495017,3.33820676823315,6.04299214086472,11.6480568327337,14.6377826733726,10.7811753061631,6.91997839412128,19.1385258256516,6.4863476686372,9.44624252497142,30.1448279181331,26.575871676373,12.2003324111248,2.303080121802,11.1264136888819,15.273755900445,5.49464048139461,21.9444398251644,16.7467588138993,27.9215393559277,8.8960291892259,3.17020642346017,4.63384301862879,7.31450608634386,5.11798328225697,6.33900880540533,16.1069895461423,13.1507051716953,16.9512174930364,12.1300375580147,2.65375590096488,2.63070531152258,4.05142873986681,18.3650530573057,5.88440093191842,17.0402923954863,16.6200405494022,22.372170943832,16.3093408081781,7.49009208110625,30.1546904460008,13.9331039296458,6.58589785919804,14.4199806030972,10.4980416073495,12.3164304288655,8.71392958196524,8.71127878890581,7.06078505825844,1.29151611801369,1.68471475667626,3.10401107475673,9.87810620889926,5.58192370155386,5.35246044999663,7.40541343326411,8.09988036556483,9.87269455406866,2.59389324477087,3.24018862342869,9.51750211553125,35.2519434720661,9.62479855263359,23.278820518198,42.1773207535381,100.122833805653,134.6003676152,70.3069862734106,101.985058802169,67.9844063969902,50.589986271008,78.5585095464424,43.8043597856996,46.5598745227712,80.3767865315609,55.1395849598148,47.0631142288457,87.1993247813088,81.7288814123743,72.3938604073555,53.9303391266551,88.1780993565274,75.3788483597442,70.0766395190016,183.078645391712,94.3796929504872,33.2335977158823,67.0730082620438,67.6136095035575,38.0664913737194,29.1939243036823,14.3578015686456,45.9956377430656,56.613239212959,34.0963376167696,2.62618933211459,35.0418323382514,2.76444631889309,17.8946576597934,9.84685914873589,14.9153664730694,36.4216562041139,29.1353063216631,13.3496152128217,26.246971975459,30.2319297425131,34.0554712732175,36.3100176110155,9.02014804219242,47.4504894057886,20.5874350876951,38.3679277670154,13.5141465722599,14.3689855408164,32.2297271419447,8.72399471485697,14.3790552150869,17.9652418201075,29.9491925248018,23.1768999989919,11.5999932069567,23.3276568985274,41.6975986480137,54.6055544883933,44.8166385213904,60.0705503569504,50.1776235357215,13.2861207872076,7.5975756334007,15.2581736317083,13.7118282314719,12.412999996049,9.65295747477479,51.0921393904064,35.831902279601,12.6967926531265,34.0686746982534,27.4371046221792,35.6337848306795,13.689568862173,3.50901275705111,16.1211764387278,2.13213910407454,99.1274992498644,43.3265507650268,41.8853438388394,75.5745463067555,65.484886462125,64.6113109856994,71.726910969742,47.3631005361528,41.5666187120213,21.0570322525301,74.4930686456868,21.8552526139512,16.9194528283346,16.6300221266278,17.7198742030751,48.629465103622,76.3625142689388,83.7464035033752,6.7401132980677,10.4335094148843,7.73072670893619,72.6170061078351,15.8488341334993,47.3421740091481,3.15667522279512,20.5684217282729,14.385419796633,22.8735418255126,48.8551113097101,54.0215477179658,26.5861549082874,15.8876138820239,26.9982309830214,29.8681074432397,16.2227441236982,14.2834913203533,11.4549427301186,33.0234379286453,58.3296684088697,9.95942008979572,23.2181143836682,56.795966466693,65.5611174263084,64.2964028726628,13.3844842754019,22.2405439262581,8.3612874088797,34.123439237041,28.2174748618245,9.55993018933768,46.3456777081483,27.334157705773,8.75157278431345,12.9876246228385,21.3253817388077,48.6780533705142,26.2540346728806,70.5868510141934,37.6485182763261,52.7954637541622,45.5279090346607,44.8746210679909,41.9212674485283,26.0055530911367,9.00630433064684,10.5417141746835,106.029668095587,16.3310867739584,75.7115580324426,12.5677080572514,5.72901060029209,5.74298419661451,15.3752830384223,4.72148652950228,7.58782955302367,8.26356711586733,8.64719720501769,44.2684608204325,30.7254410998172,32.1421847686549,31.9492797868836,29.2329620098804,61.3881657476937,8.74752658790234,7.76359414835981,68.1593349491681,76.8845450578537,70.2094171269323,27.2218408777316,10.0594254092533,7.47219546893703,9.05673656518018,6.14684516933746,12.1170098591846,13.516843074484,14.3429871466276,26.292382032764,9.29103924285377,2.64836788146173,48.0567536167477,9.77399283156683,4.32110745600634,11.7571449639387,26.3406421437472,40.5537052501735,21.4688907449631,30.5942647104339,3.3707013745959,10.6005511129777,7.23984555624683,6.6116300871345,8.21216821844781,10.5722253347501,11.1058909070402,4.08731193259131,7.45630299624952,14.3888146325466,41.8936659623642,44.5760910074079,28.087015341888,12.5124094774979,10.027595760908,7.65863941908654,13.1149052283922,18.8464915500281,10.6328181596038,14.6431517882356,8.26260142662899,4.0138643698305,7.76503360757966,8.258821591204,46.0700954337649,28.2455721994361,17.4396485172895,19.4116426810578,12.4690884440031,70.7185707768391,41.0126510968635,17.1643023319905,12.6205187317501,8.3220879225392,11.1747773112303,10.8174197753607,9.7879234375619,0.686520205190771,15.7280160713769,14.3002224536158,27.6489130480615,12.5844446059325,1.79921244865442,13.9736661188633,14.5147172744299,9.83614343864581,7.82617592717601,6.16056196888596,6.09288339470073,13.4267341957538,6.36470307208958,5.04829618099696,2.78420255927096,8.36001366267094,51.6035816415468,21.2905337213332,18.5212218821256,12.6184898228651,21.573421005618,24.4463414167415,14.3546860580866,33.0990651247918,20.8370226891451,19.3341996560109,23.2815493405934,33.659357740546,28.7262104948106,33.0408702918798,20.0630599801751,26.8618480638386,42.7923336041871,44.9059444250558,20.0547571077072,7.88073086064865,12.4710597657209,9.43340366224878,9.9774890496065,42.5892803500336,14.2548287077157,20.9199002125041,45.3971388590691,81.1924062972412,28.932116583017,39.7261167496785,44.5536399609455,2.37795163123056,3.11038630016486,24.4278249189975,67.2826823115294,19.1864449064194,43.2470167240375,71.4573951106446,43.3652837007433,38.1722153917727,56.9817816332709,11.7661609741765,119.475543676899,56.8405231282683,20.8078806777504,10.718591707362,6.80829786022471,8.5017945795351,7.82205909380041,4.71767637753736,16.6367319506334,8.78297106295567,9.85001438354292,4.28308260777463,7.45922660607795,113.840783030569,17.7925740566029,48.9828824477434,15.2552838186867,26.2336771902838,43.1648201992316,13.9139107446126,28.6421197558998,3.90757005616546,37.190750616362,28.823857481777,35.929028950742,8.57727324653612,6.24862478891078,6.82066428453907,6.27816520919678,18.5971435066195,4.93431990171464,15.8787577084574,12.4868583495331,17.8867398695433,2.14280734351315,2.35398605553177,2.42786241694653,3.41493287026946,12.4183318227694,36.529174055182,34.9835539252334,7.81651929233565,7.16923231835055,51.2961269436422,32.5908007543763,11.303005370474,11.3123224739521,15.1346968189446,20.0894918512089,29.1502248145139,17.1990607639338,9.14899765461201,97.1783712156269,46.1478458711457,72.4988995501756,9.62053637676303,14.5051314914126,10.4138271027309,2.76503864725637,2.58136415292167,22.4830801388074,20.0251501184021,4.65725755210022,27.492824225286,7.13474687027936,17.1997009015938,14.7649169973086,15.0169857431322,51.4493643425177,5.17943069750316,7.59704770736228,10.4383298820438,17.485595750129,73.6909309905633,65.2558542529288,26.7570204249529,78.4975270170772,77.5080643055275,56.4601034939359,20.2968035823894,34.3138509991213,63.4928350088056,12.7477127312031,11.0767977137764,10.796965691322,10.9907168121022,9.2984260068348,30.0770992997436,16.8231213183938,15.0831457858171,40.4761681495962,17.3197320447488,6.35210769088245,36.7505459436391,13.1460549884373,5.96348068425903,5.73358332605805,52.5379302103305,7.81902137195519,14.8359234715728,28.5674493878316,20.0877309810046,16.6383226307311,15.1419296743326,48.8264064111755,63.155500595016,99.3316247929666,54.6660127417022,64.9338294795312,14.7031839255752,50.141507858475,20.5360272171429,19.8293456315572,9.12086383404657,5.06821679723287,8.9558272398412,20.4735411058817,71.4353342786228,37.4931274346982,17.7168342877369,5.47365561192218,7.47833599145411,12.6275713780238,10.951465634729,23.9773308731932,11.1886640412575,11.6431124791105,37.6897133668812,71.6140490839471,21.2379510515634,8.26391859380599,14.0784565442073,8.43465964861779,23.5999783423128,8.65483806441166,18.3159152167834,25.9660478765619 | |||
|short_description=p1@MCM6 | |||
}} |
Revision as of 05:34, 21 January 2014
Short description: | p1@MCM6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MCM6_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 0bp_to_ENST00000264156, NM_005915, uc002tuw.2_5end |
EntrezGene: | MCM6 |
HGNC: | 6949 |
UniProt: | Q14566 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 8.68e-07 | 53 |
common lymphoid progenitor | 8.68e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
upper respiratory tract | 1.56e-07 | 19 |
larynx | 5.80e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.22e-46 | 235 |
disease of cellular proliferation | 9.57e-45 | 239 |
hematologic cancer | 1.11e-24 | 51 |
immune system cancer | 1.11e-24 | 51 |
cell type cancer | 3.90e-23 | 143 |
organ system cancer | 9.07e-22 | 137 |
leukemia | 7.54e-21 | 39 |
carcinoma | 1.36e-18 | 106 |
myeloid leukemia | 2.88e-16 | 31 |