FFCP PHASE1:Hg19::chr2:113594347..113594363,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3553 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5992 | |||
|TSSclassifier=not | |||
|UniProt=P01584 | |||
|association_with_transcript=0bp_to_ENST00000477398,ENST00000491056,ENST00000496280,NM_000576,uc002tii.1_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_IL1B_5end | |||
|id=chr2:113594347..113594363,- | |||
|ontology_enrichment_celltype=CL:0000766!1.52e-24!76;CL:0002057!5.92e-24!42;CL:0000860!2.45e-21!45;CL:0002009!4.10e-21!65;CL:0000557!5.97e-21!71;CL:0000763!1.23e-20!112;CL:0000049!1.23e-20!112;CL:0002194!3.52e-20!63;CL:0000576!3.52e-20!63;CL:0000040!3.52e-20!63;CL:0000559!3.52e-20!63;CL:0000839!3.99e-19!70;CL:0000738!4.59e-15!140;CL:0000037!7.70e-15!172;CL:0000566!7.70e-15!172;CL:0002032!3.06e-13!165;CL:0000837!3.06e-13!165;CL:0000359!5.75e-12!32;CL:0000988!8.78e-12!182;CL:0002087!2.89e-11!119;CL:0002031!3.59e-11!124;CL:0000723!4.10e-10!436;CL:0000034!5.51e-10!444;CL:0000048!1.11e-09!430;CL:0000192!9.07e-08!42;CL:0000514!9.07e-08!42 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.43e-20;33!CL:0002057;4.43e-20;33!CL:0000473;1.15e-17;39!CL:0000234;1.15e-17;39!CL:0000576;1.90e-13;48!CL:0000766;3.46e-12;69!CL:0000359;7.09e-12;32!CL:0000763;4.62e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.34e-26,72;CL:0000473,3.57e-26,48;CL:0000234,3.57e-26,48;CL:0000860,3.73e-25,42;CL:0002057,3.73e-25,42;CL:0002009,5.29e-23,61;CL:0000557,1.01e-22,67;CL:0002194,5.26e-22,59;CL:0000576,5.26e-22,59;CL:0000040,5.26e-22,59;CL:0000559,5.26e-22,59;CL:0000763,3.54e-21,108;CL:0000049,3.54e-21,108;CL:0000839,3.26e-20,66;CL:0000738,4.69e-15,136;CL:0000037,1.47e-14,168;CL:0002032,7.55e-13,161;CL:0000837,7.55e-13,161;CL:0000359,1.78e-12,32;CL:0000988,1.36e-11,177;CL:0002087,2.48e-11,115;CL:0002031,7.03e-11,120;CL:0000723,2.90e-09,433;CL:0000034,4.61e-09,441;CL:0000048,9.32e-09,427;CL:0000192,5.29e-07,43;CL:0000514,5.29e-07,43 | |||
|ontology_enrichment_development_v019=CL:0002057;2.04e-18;42!CL:0000049;5.63e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.89e-18!102;UBERON:0003061!4.89e-18!102;UBERON:0002371!7.21e-17!80;UBERON:0002193!1.27e-16!112;UBERON:0002204!3.37e-14!167;UBERON:0003081!3.75e-14!216;UBERON:0001474!5.25e-14!86;UBERON:0002405!8.34e-13!115;UBERON:0004765!2.40e-11!101;UBERON:0001434!2.40e-11!101;UBERON:0001637!1.28e-08!42;UBERON:0003509!1.28e-08!42;UBERON:0004572!1.28e-08!42;UBERON:0004573!2.55e-08!33;UBERON:0004571!2.55e-08!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;7.37e-08;33!UBERON:0004571;7.37e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.61e-19,98;UBERON:0003061,2.61e-19,98;UBERON:0003081,5.48e-19,203;UBERON:0002193,5.14e-18,108;UBERON:0002371,5.82e-18,76;UBERON:0002405,1.11e-15,93;UBERON:0001474,2.59e-15,82;UBERON:0004765,6.78e-14,90;UBERON:0002204,1.47e-12,167;UBERON:0001434,3.99e-11,100;UBERON:0001637,1.57e-09,42;UBERON:0003509,1.57e-09,42;UBERON:0004572,1.57e-09,42;UBERON:0004573,6.34e-09,33;UBERON:0004571,6.34e-09,33;UBERON:0000926,1.52e-08,315;UBERON:0004120,1.52e-08,315;UBERON:0006603,1.52e-08,315;UBERON:0002050,1.43e-07,564;UBERON:0000923,4.97e-07,560;UBERON:0010316,4.97e-07,560;UBERON:0005291,4.97e-07,560;UBERON:0006598,4.97e-07,560;UBERON:0010317,4.97e-07,560;UBERON:0002532,4.97e-07,560 | |||
|phase1_expression=0.363356758541113,3.8538094300377,0.281908808191942,0,0.446961094427288,0,0,1.89515962028049,1.30592814099919,1.47440361900905,0,0,0,0.123766352960047,0,2864.77744903101,3187.65135871881,2808.77260762984,2827.0826361922,0,0,0,0.572471974262113,0,0,1.14620108621927,0.656804715599566,0.314843125254717,2998.61588241919,2650.72582325935,3157.16520278474,235.371833466605,105.422071572388,102.052106806033,0,0,153.84663021146,17451.9633595712,15561.8480347881,11846.1894106369,1.34349284543955,0.32389366601898,1.28787783817093,290.941875797909,270.559175681188,537.566279592201,5969.7073838856,4134.70428194748,9201.06657292263,20019.0751197368,11894.3100862657,27035.8309320125,59059.7615497131,42977.6612023783,58876.6650468901,1630.17866043896,2029.87594413026,5573.1424142381,81286.0871291559,61860.0327559983,84692.3497174732,761.956503431314,987.544568884699,1542.08114742729,103224.233878562,90941.6385839453,126269.114294616,3479.54276514064,3955.96941913565,7560.99525071923,51000.6703003429,91902.9475054248,124664.97767175,102.036303288668,413.727967731975,231.463144641247,193.317574203118,286.08698086307,219.229700254817,26.5061851679361,11.5371672775472,27.947615525989,0,4.91524750135918,0,9.81479511902967,1.20118796110804,8.04653415936277,8.59358334620321,2.86216126360609,78.5513897371039,719.952794168771,238.920767578268,315.889475303872,4575.99190818126,89.2872047387511,35.2110488503761,40.480108563164,70.1101111588326,0,0.32592226663359,0,0,0,0.883817722424512,0,1.35401931882508,0,0,0,0,0,0.296573126324121,0.267540828089713,2.09071047609954,0,0.383220493601921,0.34362744548263,0.506039384039006,4.77848121486145,0.651083453856419,0,17.3161386939439,6.2713439465665,31.2326816380865,13.2595261144649,4.92676798152628,5.24177532384304,4.01160293675261,6.80674698249155,4.87613732627923,209.929369087238,15.2156448593801,0,0,0,0,6.8128881842369,0.567208902984407,0,14.7562439964452,7.85874452986276,151.182544641405,87.5051284971253,5.51730569212962,4.87563264437948,5.05240249971688,1286.17993687871,368.364722542402,276.364380989196,0,0.860234595106124,0,0,0,0,0,0,2.13459757612026,1.00416183829401,2.01414658554573,1.52054421143703,1.22031028774085,0,0,0,0,0,0,0,2.38162267109529,7073.97280796788,9605.31714295402,92.0158450020747,4.47274756525787,45.9668757342425,289.711287619323,19.5048902109193,87.6030904029942,8.41016400213461,905.231483787898,549.081962776598,1.55605517699883,53.2107154675268,8.82694276812677,0,0.576175924479999,0.70296429550139,0.312160076830321,2.85235910772225,0.597794722207204,0,0,0.140450806702248,0,0,0.619954687054593,0,0.247266929278557,0,0,0,0.125118519871964,0,0,2.75839016219118,2.70428506031874,110.48294639786,1.07633781413317,0.213557388818567,0.847727604638247,1.50045548042201,1.64884046781502,3.60696756063881,1.30281799432113,0.168776332241266,0,1.00973509697646,0.276149695926898,0,3.55009592516614,0.302256294682921,1.69560592310488,948.717528178624,849.058673399268,774.37240755031,0.121973706129595,0,0.116193942869518,0.310983165046111,0,0,699.329409514277,3.21620469096443,4.14404764057442,2.3218396401599,0,5.32380600179297,0,0,3.86028904563379,0.435758888184812,0.474541238222193,44.0898377683738,0.784885860501384,0,0,19.6338483324824,1.6462960453256,1.47008711385542,1.26755034821831,15.725235466842,8.86184860022106,0,0.122988438543114,0.857839051492628,909.829866037506,358.561592891806,72.0792732191393,119.902036480296,0,1.03993478527958,11.5465073620219,0,0.234817388471643,31.0387862686309,24.0752466539838,17.1228737011138,0,0,7.63272718870932,41.6527591947843,24.3755106153514,1821.24839436308,143.792701738224,1143.13260906536,13.8815710189415,100.559342725831,20.7026646749214,16.2578868505661,39.2696015698988,14.512968087854,2.59415916150531,2.77733353538036,0.698476837213859,0,0,23.9501424431787,0,0,0,0,0,0,580.300732036664,0,4.22651376278,0,1.04007436911366,0,0,0,56.6192854886264,8.13932408087165,0,10.7492940816933,50.8210486701841,9.50342247520115,188.399610662241,166.462890592656,41.3888183493716,214.057853928495,103.96721792645,149.692097032952,0.718874566474748,0,0,0.579125226670317,0,0.179060963239896,0,462.431194193923,41.1848667981678,356.023582640022,2.03275699377971,0,4.63973287666617,1.34013012267479,3.18969375826582,1324.99342536257,529.515782791124,1933.24837017911,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,30.0071906748264,0.664225598535437,2.02806085395873,2.43274120510632,0.391602314925481,0.343143423810856,418.498484872724,2538.95614363512,3448.15393751368,0,0,0,1.98486246255021,0.767309866440312,1.40330047216537,0.256278298511402,0,0.965123526861645,0,36.8561168188347,30.8957402044841,10.9229117498366,2139.32824823652,17.199136012074,0,386.576474744733,71.8231713699991,5.1666501674073,0,0.524497659837696,0,0.539107359730903,0,0,0,0,0.510281115829547,0.215915916102139,0,0,0,0.509752546090077,0,0,0.657779629937804,0.261435451024901,0,0,0,37.3008462164755,0,0,788.466583668745,413.438316479227,14.4615536859744,4.93020663289822,0.6161944684585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| |||
|short_description=p1@IL1B | |||
}} |
Revision as of 05:01, 21 January 2014
Short description: | p1@IL1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IL1B_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000477398, ENST00000491056, ENST00000496280, NM_000576, uc002tii.1_5end |
EntrezGene: | IL1B |
HGNC: | 5992 |
UniProt: | P01584 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.34e-26 | 72 |
defensive cell | 3.57e-26 | 48 |
phagocyte | 3.57e-26 | 48 |
classical monocyte | 3.73e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.73e-25 | 42 |
macrophage dendritic cell progenitor | 5.29e-23 | 61 |
granulocyte monocyte progenitor cell | 1.01e-22 | 67 |
monopoietic cell | 5.26e-22 | 59 |
monocyte | 5.26e-22 | 59 |
monoblast | 5.26e-22 | 59 |
promonocyte | 5.26e-22 | 59 |
myeloid cell | 3.54e-21 | 108 |
common myeloid progenitor | 3.54e-21 | 108 |
myeloid lineage restricted progenitor cell | 3.26e-20 | 66 |
leukocyte | 4.69e-15 | 136 |
hematopoietic stem cell | 1.47e-14 | 168 |
hematopoietic oligopotent progenitor cell | 7.55e-13 | 161 |
hematopoietic multipotent progenitor cell | 7.55e-13 | 161 |
vascular associated smooth muscle cell | 1.78e-12 | 32 |
hematopoietic cell | 1.36e-11 | 177 |
nongranular leukocyte | 2.48e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 7.03e-11 | 120 |
somatic stem cell | 2.90e-09 | 433 |
stem cell | 4.61e-09 | 441 |
multi fate stem cell | 9.32e-09 | 427 |
smooth muscle cell | 5.29e-07 | 43 |
smooth muscle myoblast | 5.29e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.61e-19 | 98 |
blood island | 2.61e-19 | 98 |
lateral plate mesoderm | 5.48e-19 | 203 |
hemolymphoid system | 5.14e-18 | 108 |
bone marrow | 5.82e-18 | 76 |
immune system | 1.11e-15 | 93 |
bone element | 2.59e-15 | 82 |
skeletal element | 6.78e-14 | 90 |
musculoskeletal system | 1.47e-12 | 167 |
skeletal system | 3.99e-11 | 100 |
artery | 1.57e-09 | 42 |
arterial blood vessel | 1.57e-09 | 42 |
arterial system | 1.57e-09 | 42 |
systemic artery | 6.34e-09 | 33 |
systemic arterial system | 6.34e-09 | 33 |
mesoderm | 1.52e-08 | 315 |
mesoderm-derived structure | 1.52e-08 | 315 |
presumptive mesoderm | 1.52e-08 | 315 |
embryonic structure | 1.43e-07 | 564 |
germ layer | 4.97e-07 | 560 |
germ layer / neural crest | 4.97e-07 | 560 |
embryonic tissue | 4.97e-07 | 560 |
presumptive structure | 4.97e-07 | 560 |
germ layer / neural crest derived structure | 4.97e-07 | 560 |
epiblast (generic) | 4.97e-07 | 560 |