FFCP PHASE1:Hg19::chr2:85843252..85843321,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10713 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20071 | |||
|TSSclassifier=strong | |||
|UniProt=Q53GS9,B9A018,G5E9H0,F8WC91 | |||
|association_with_transcript=0bp_to_ENST00000323701,ENST00000409025,ENST00000409470,ENST00000409766,ENST00000455732,ENST00000458268,NM_006590,uc002sqe.2,uc002sqf.2,uc002sqg.2,uc010fgn.1,uc010fgo.2_5end | |||
|description=CAGE_peak_1_at_USP39_5end | |||
|id=chr2:85843252..85843321,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.83e-11!254;CL:0000012!1.44e-10!682;CL:0000003!4.28e-10!722;CL:0000548!5.09e-10!679;CL:0000004!5.09e-10!679;CL:0000255!5.09e-10!679 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.65e-11,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.70e-25!235;DOID:14566!4.13e-24!239;DOID:2531!1.21e-18!51;DOID:0060083!1.21e-18!51;DOID:1240!6.43e-16!39;DOID:0050686!1.09e-14!137;DOID:8692!3.97e-12!31;DOID:0050687!3.26e-11!143;DOID:305!2.26e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:1240;6.28e-13;39!DOID:2531;2.14e-12;51!DOID:0060083;2.14e-12;51!DOID:8692;9.96e-12;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.70e-25,235;DOID:14566,4.13e-24,239;DOID:2531,1.21e-18,51;DOID:0060083,1.21e-18,51;DOID:1240,6.43e-16,39;DOID:0050686,1.09e-14,137;DOID:8692,3.97e-12,31;DOID:0050687,3.26e-11,143;DOID:305,2.26e-09,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=30.1586109589124,27.8330681058278,31.1509233052096,20.0146596706261,23.6889380046463,26.1701557230111,20.2639902534648,29.0591141776342,26.1185628199839,82.3208687280055,54.4284911018493,43.4698330539043,33.4984062350136,28.2187284748906,22.2036241737704,27.5653310045228,28.3266428171269,32.1336439770444,29.2759679274304,68.7015504068477,44.6761513824914,40.4356590706733,53.2398936063765,52.9704025032062,52.3512807110328,36.7548481647646,41.5428982616725,40.8508955017995,42.0899776228327,43.372721984985,33.7499148829046,39.5351126525939,50.602594354746,38.4544170573459,56.8609252259414,63.5496469218774,50.4992755655937,18.8358438900838,19.0517225096635,19.3139674937108,34.2590675587084,35.6283032620877,31.6817948190049,32.5692054866225,30.9858273824824,34.4469366886699,22.3131875429457,19.3248907370258,23.847390558923,21.2892370318391,21.7736600549736,28.8508320464074,25.5111803745098,21.9464792418501,37.9194162464157,26.9186545545925,31.1113011065944,35.2815870578783,18.6711174346251,25.0324641119353,23.0161365287655,31.6657248179247,27.9249120670285,31.1144067888867,13.3496249769149,16.4541715160431,19.9303119678584,23.6173745341339,25.5526630025899,26.4970390540242,14.5295880632009,23.5697687032041,26.2663781575934,37.6034409635256,38.0561696937428,38.3675321280328,35.2711901799995,32.2880319609239,40.18139667427,29.9263380928311,33.2190850922481,38.5421364443378,51.0389108937836,46.9679205685433,49.8125182163591,46.5135942597493,42.0415786387813,45.9801951963587,43.6289616038009,40.0702576904853,35.2912040847858,36.9959429303691,28.2882188812669,43.6165384310785,39.2355994087075,65.055868939444,32.0636925285548,36.1569901729232,36.3914653229131,57.6793409097839,29.0070817303895,33.6147942071661,48.7066821019778,50.691757882754,41.539432953952,48.515922913813,48.7446954777028,44.0634139856323,45.5207716459574,46.0426132890293,42.2815527212348,53.0339646895146,39.4442258011081,44.6793182909821,34.4967228556423,58.9208582027344,35.6395059049787,38.4862738940546,42.254288567257,41.7320692764567,55.3420935777956,46.5721501779703,55.8633691778537,53.3704168513925,48.7229833554149,49.0128911731115,43.5197838368155,32.0554721727325,35.0346656476395,30.7027736231534,9.75227465255847,36.2178464239963,41.9389202846779,35.0595977813029,43.1150603146865,30.9971550576163,49.3077287171682,26.764917866645,40.8390410148773,28.3813628752082,33.7285577061604,29.7322501379808,68.1232189107054,61.1794330594308,40.2438768131807,37.786152993941,31.7769525640088,32.9117061541372,35.4636844683679,38.2601226369452,66.3866440604795,60.2164216574287,67.3452573118733,48.6164830054648,36.0769515140519,42.3681784587704,63.3254748606536,30.7515943411501,28.4613010149368,34.1415025019964,41.088590345133,48.6574147659848,31.2399433661657,47.0608742842712,47.7983749250238,50.2757470239369,41.7624633084676,56.5309632026278,53.6608231130591,80.6875810632909,46.350041214393,21.0848667897701,34.9002237733493,61.0531672999548,25.8425414881566,42.2945908959696,32.043021756799,30.9783550408719,35.8215066020341,34.2013336086807,53.3744978648525,26.146760132219,37.0341132125722,30.0404798715404,36.7789282005282,46.315372859349,27.0802684505599,85.5273226193358,15.608003841516,75.8727522654117,21.6700586800112,52.8455243896942,49.0475021435439,48.595979118978,30.0106631744693,41.8865022033129,30.6877570092023,33.2640800038975,27.4466291499198,78.2738771266703,32.3378163817307,57.7392870862447,47.5450375513464,38.2348479368172,30.2894558407778,34.6331209252892,27.7940408977204,37.546052625967,35.1603685950169,32.6742804892408,39.4193336156785,39.0118424909723,37.8202782305071,32.4627080457493,32.0120992890335,29.8734108067041,33.2260187599687,42.1564402987671,31.665165132951,37.5018851819644,26.6257194387461,37.2782763442269,50.3594959162148,32.2745624782706,38.4572030033077,34.1297468512915,61.8406690077049,75.0118488699607,72.621214293449,62.1966330092223,62.3232501662802,62.7761057610428,25.0319251727706,23.1566737749439,45.5845240463186,21.360924689471,25.2657818584355,46.3762656156188,53.9471008249925,46.2741177376285,41.3602397746477,44.4474065948509,51.2504537279969,49.3482587866202,48.0742589557098,48.4781417752452,41.3367054589803,39.2676966649648,46.5078632804482,48.5128747572288,12.6755034821831,31.450470933684,20.0868568271677,87.4096936841008,55.4677857829442,28.8233921301523,39.2906021762879,68.5650694871479,48.3544357299944,38.1464394053142,79.8230348010296,40.5574566259036,25.9796415645492,40.4597113363018,34.4007474110958,35.0810468059409,33.334956905516,31.7724434231779,50.5730814693936,35.1979326458898,42.1031080409449,39.3127165433919,36.117372436161,32.8068418953719,30.9087115885902,37.8539509637172,40.3908937389846,49.1171356088596,41.0219466706776,29.5597942737566,41.6469092882559,33.5871547176051,45.2536653729259,33.4542448579907,59.2435353745937,60.3541712382079,91.4296088238366,49.6110093465845,49.6656789757053,41.1469989246167,41.4448327314338,79.3888077165154,48.3915676404941,57.8639075127296,29.215407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| |||
|short_description=p1@USP39 | |||
}} |
Revision as of 04:13, 21 January 2014
Short description: | p1@USP39 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_USP39_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000323701, ENST00000409025, ENST00000409470, ENST00000409766, ENST00000455732, ENST00000458268, NM_006590, uc002sqe.2, uc002sqf.2, uc002sqg.2, uc010fgn.1, uc010fgo.2_5end |
EntrezGene: | USP39 |
HGNC: | 20071 |
UniProt: | Q53GS9B9A018G5E9H0F8WC91 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.65e-11 | 253 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.70e-25 | 235 |
disease of cellular proliferation | 4.13e-24 | 239 |
hematologic cancer | 1.21e-18 | 51 |
immune system cancer | 1.21e-18 | 51 |
leukemia | 6.43e-16 | 39 |
organ system cancer | 1.09e-14 | 137 |
myeloid leukemia | 3.97e-12 | 31 |
cell type cancer | 3.26e-11 | 143 |
carcinoma | 2.26e-09 | 106 |