FFCP PHASE1:Hg19::chr2:36796813..36796868,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:36796813..36796868,- | |||
|id=chr2:36796813..36796868,- | |||
|ontology_enrichment_celltype=CL:0000213!6.81e-28!57;CL:0000215!6.81e-28!57;CL:0002139!2.55e-21!24;CL:0000076!3.12e-20!62;CL:0000115!1.50e-17!35;CL:0000066!5.56e-17!254;CL:0000071!1.77e-15!18;CL:0002546!1.77e-15!18;CL:0000077!3.29e-14!19;CL:0002078!3.82e-14!44;CL:1000413!2.32e-09!9;CL:0005020!1.86e-07!6;CL:0002138!1.86e-07!6;CL:0005022!1.86e-07!6;CL:0002543!4.66e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000077;7.02e-30;19!CL:0000213;1.99e-27;58!CL:0000215;1.99e-27;58!CL:0002139;2.47e-26;24!CL:0000115;6.55e-18;36!CL:0002138;2.38e-17;6!CL:0002586;2.92e-14;3!CL:0000076;6.93e-14;63!CL:0002078;8.96e-14;45!CL:0000071;1.89e-13;18!CL:0000149;8.39e-11;4!CL:1000413;2.23e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,4.31e-46,58;CL:0000215,4.31e-46,58;CL:0000077,7.32e-30,19;CL:0000076,1.00e-29,63;CL:0002139,2.45e-26,24;CL:0000115,2.87e-22,36;CL:0002078,8.10e-20,45;CL:0000222,1.14e-18,121;CL:0000066,4.75e-18,253;CL:0005020,2.27e-17,6;CL:0002138,2.27e-17,6;CL:0005022,2.27e-17,6;CL:0002586,2.98e-14,3;CL:0000071,1.92e-13,18;CL:0002546,1.92e-13,18;CL:0000149,8.54e-11,4;CL:0002321,2.07e-10,250;CL:1000413,2.35e-07,9 | |||
|ontology_enrichment_development_v019=CL:0005022;2.38e-17;6!CL:0002546;1.89e-13;18!CL:0000222;4.78e-07;121 | |||
|ontology_enrichment_disease=DOID:305!1.16e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.77e-15!18;UBERON:0004638!1.77e-15!18;UBERON:0004852!1.77e-15!18;UBERON:0000487!2.58e-13!22;UBERON:0006914!6.83e-11!25;UBERON:0003915!2.32e-09!9;UBERON:0004700!2.32e-09!9;UBERON:0001917!2.32e-09!9;UBERON:0002346!2.13e-07!90;UBERON:0000477!2.39e-07!286;UBERON:0003075!3.14e-07!86;UBERON:0007284!3.14e-07!86;UBERON:0000063!4.21e-07!97;UBERON:0000025!5.22e-07!194;UBERON:0004111!8.68e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0001781;2.92e-14;3!UBERON:0001782;2.92e-14;3!UBERON:0000487;8.42e-14;22!UBERON:0004638;1.89e-13;18!UBERON:0001986;1.89e-13;18!UBERON:0004852;1.89e-13;18!UBERON:0001473;6.02e-13;8!UBERON:0004536;6.02e-13;8!UBERON:0006558;6.02e-13;8!UBERON:0006914;5.99e-12;25!UBERON:0002465;2.67e-10;10!UBERON:0000490;3.74e-10;33!UBERON:0000966;1.02e-08;5!UBERON:0005388;1.02e-08;5!UBERON:0001802;1.02e-08;5!UBERON:0003915;2.23e-07;9!UBERON:0004700;2.23e-07;9!UBERON:0001917;2.23e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,2.98e-14,3;UBERON:0005424,2.98e-14,3;UBERON:0000487,8.63e-14,22;UBERON:0004638,1.92e-13,18;UBERON:0001986,1.92e-13,18;UBERON:0004852,1.92e-13,18;UBERON:0001473,5.80e-13,8;UBERON:0004536,5.80e-13,8;UBERON:0006558,5.80e-13,8;UBERON:0006914,6.12e-12,25;UBERON:0001781,8.54e-11,4;UBERON:0002465,2.60e-10,10;UBERON:0000055,9.22e-09,68;UBERON:0003915,2.35e-07,9;UBERON:0004700,2.35e-07,9;UBERON:0001917,2.35e-07,9;UBERON:0000966,2.56e-07,6;UBERON:0005388,2.56e-07,6;UBERON:0001802,2.56e-07,6;UBERON:0002049,2.88e-07,78;UBERON:0007798,2.88e-07,78 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0.572471974262113,0.273748850145768,0.376627918784408,0,0,0,0,0,0.154816123316076,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,2.98143611050058,0.860234595106124,0.694281003215189,0.56530794192401,1.25849830862972,0.825354125820202,1.67195973229448,3.35941786920128,3.20189636418039,7.02913286805807,2.41697590265488,3.80136052859256,0,4.04429388380456,0.81014194788176,4.73288559905623,0.898117490504679,0.900891843866578,3.06633274931766,0.949265659568129,0.916008719652036,0,0,0,0,0,0.132409180813219,0,0.709336764396714,0,0,0,0,0.538842688278752,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.567160915800105,0.89694817844431,0,0.211931901159562,0.300091096084402,0.103052529238439,0.257640540045629,0,0.168776332241266,0.0974370051611986,0,0,0,1.06502877754984,0.10075209822764,0.169560592310488,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.337169380156203,0.241011029883482,0.110293972732394,0.435758888184812,0.237270619111097,0.404493924480493,0,0.38474715694639,0.738155454624648,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579652024875384,0.117408694235822,3.3204282985047,0.925971025153221,1.71228737011138,0,0,0,0,0.148631162288728,0.93733833986777,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0.300343057843917,0,0.112131084345361,0,0.2933531432838,0.258543431515556,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,12.9618932135622,3.48613383440118,14.8959756861265,0,0,0,0,0,0,0,0,0.179060963239896,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0.30239029332968,0,0.153461973288062,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,2.27466768141793,0.680374821106063,0.647747748306418,0,0,0,0,0,0,0,0,23.3369613855914,22.6330105532797,10.0867302345934,0,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0.459446800413919,0,0,0,0,0.411362273086194,0.648473311192717,0,0,0.106824071127473,0,1.71528151186722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,33.2439291763503,0,0.890894042497916,0,0,0,0.111308705022906,0,0,0,0.552567831062295,0,1.84083628503879,0,0,0.629078458031288,0,0,0,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0.227586896570999,0,0.472775363535873,0.689486746482929,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.141353071433941,0,0,0,0,0,0,0.104421949505455,0.337005664903385,0.802577647298789,0.234264445725339,0,0,8.01175252462506,0,0,0,0,0,0,0,0.661983911750998,0.627865836814451,0,0,0.138674673013139,0,0.0979923974143777,4.78825636192214,0.698906672968121,0.343972064943233,0.387025325156341,0.219267951258557,0.492692742319255,0,0,0,0,0.19871461170299,0.0633107959558787,0,0.0801588202515337,0.213452994739353,0,0.144090417154106,0,0,0.288109595976299,4.47309128035557,0,1.35904206073614,1.882851233622,0.101998217636322,0.288950589901519,0,0.273810757783986,0,0,0.262887354279314,0,0.458320848023367,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.196854963029498,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.0607495566580247,0,0,0,0.211200673038813,0.179287339332845,0.767660789277781,0,0,0,0,0,0.326587360109409,2.39460383124975,0,0.340776043570843,0,0,0,0.129282956361551,0.52893040697076,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,1.14681839138014,0.443716206147409,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.477890301491107,0,0.931577741257556,0,0,0,0.751288044986092,1.52322084867518,1.62748293281865,0,2.90008504014719,0.464033759878494,0,0.400027764663154,0,0,0,0.192619830407303,33.6673298458633,3.13193150358254,1.81364740409818,0.231522474323834,0.734210113519403,2.14906609297785,10.4992492034731,15.1305994209308,0.706756583783524,4.62993691850196,3.7167336943676,0,1.0362910251936,0.303859956177382,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0.212574920101683,0,0,0,0,0,0,0,0.0642292250964595,0,0.638535436228605,0.41023272848151,0,0.138314504928436,0.322951291263702,0,0,0,0,0.808679663052368,0,0.690359926060101,0,0,0,0,0,0.327543835020193,4.5835386727284,0,0,0,0.126831620387814,0,0,0.496211178389294,0.175871244359621,0.383287282918786,0,0,0,0,0.177404740325278,0,0,0.339848664884159,0,0.354581522651905,0.667388411352415,0,0.314231179832004,0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| |||
|short_description=p@chr2:36796813..36796868,- | |||
}} |
Revision as of 02:34, 21 January 2014
Short description: | p@chr2:36796813..36796868, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:36796813..36796868, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 4.31e-46 | 58 |
barrier cell | 4.31e-46 | 58 |
mesothelial cell | 7.32e-30 | 19 |
squamous epithelial cell | 1.00e-29 | 63 |
endothelial cell of vascular tree | 2.45e-26 | 24 |
endothelial cell | 2.87e-22 | 36 |
meso-epithelial cell | 8.10e-20 | 45 |
mesodermal cell | 1.14e-18 | 121 |
epithelial cell | 4.75e-18 | 253 |
lymphangioblast | 2.27e-17 | 6 |
endothelial cell of lymphatic vessel | 2.27e-17 | 6 |
vascular lymphangioblast | 2.27e-17 | 6 |
retinal pigment epithelial cell | 2.98e-14 | 3 |
blood vessel endothelial cell | 1.92e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.92e-13 | 18 |
visual pigment cell | 8.54e-11 | 4 |
embryonic cell | 2.07e-10 | 250 |
endothelial cell of artery | 2.35e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 2.98e-14 | 3 |
presumptive retinal pigmented epithelium | 2.98e-14 | 3 |
simple squamous epithelium | 8.63e-14 | 22 |
blood vessel endothelium | 1.92e-13 | 18 |
endothelium | 1.92e-13 | 18 |
cardiovascular system endothelium | 1.92e-13 | 18 |
lymphatic vessel | 5.80e-13 | 8 |
lymph vasculature | 5.80e-13 | 8 |
lymphatic part of lymphoid system | 5.80e-13 | 8 |
squamous epithelium | 6.12e-12 | 25 |
layer of retina | 8.54e-11 | 4 |
lymphoid system | 2.60e-10 | 10 |
vessel | 9.22e-09 | 68 |
endothelial tube | 2.35e-07 | 9 |
arterial system endothelium | 2.35e-07 | 9 |
endothelium of artery | 2.35e-07 | 9 |
retina | 2.56e-07 | 6 |
photoreceptor array | 2.56e-07 | 6 |
posterior segment of eyeball | 2.56e-07 | 6 |
vasculature | 2.88e-07 | 78 |
vascular system | 2.88e-07 | 78 |