FFCP PHASE1:Hg19::chr2:19558373..19558392,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=130497 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8111 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000498844_5end | |||
|description=CAGE_peak_1_at_OSR1_5end | |||
|id=chr2:19558373..19558392,- | |||
|ontology_enrichment_celltype=CL:0000055!7.46e-25!180;CL:0000057!4.25e-23!75;CL:0000680!9.47e-13!57;CL:0000056!9.47e-13!57;CL:0000355!9.47e-13!57;CL:0000187!7.04e-12!54;CL:0000183!7.36e-12!59;CL:0000192!5.49e-10!42;CL:0000514!5.49e-10!42;CL:0000393!9.54e-09!60;CL:0000211!9.54e-09!60;CL:0000359!7.08e-08!32;CL:0002334!3.70e-07!12;CL:0002620!5.50e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000057;1.01e-09;73!CL:0000192;1.70e-08;43!CL:0000359;6.96e-08;32!CL:0000187;1.36e-07;55!CL:0002334;1.65e-07;12!CL:0002620;2.42e-07;23!CL:0000134;7.07e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.49e-24,76;CL:0000680,7.31e-14,58;CL:0000056,7.31e-14,58;CL:0000355,7.31e-14,58;CL:0000187,6.21e-13,55;CL:0000192,6.34e-11,43;CL:0000514,6.34e-11,43;CL:0000393,1.02e-09,61;CL:0000211,1.02e-09,61;CL:0000359,2.89e-08,32;CL:0002334,1.67e-07,12;CL:0002620,2.54e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000514;1.70e-08;43!CL:0000355;7.18e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.79e-20!365;UBERON:0000914!1.14e-18!83;UBERON:0002329!1.14e-18!83;UBERON:0003077!1.14e-18!83;UBERON:0003059!1.14e-18!83;UBERON:0007282!1.14e-18!83;UBERON:0009618!1.14e-18!83;UBERON:0007285!1.14e-18!83;UBERON:0000481!1.95e-17!347;UBERON:0002100!2.41e-17!216;UBERON:0004290!7.85e-17!70;UBERON:0003104!7.94e-16!238;UBERON:0009142!7.94e-16!238;UBERON:0005256!1.28e-15!143;UBERON:0000486!5.31e-15!82;UBERON:0002385!1.52e-14!63;UBERON:0001015!1.52e-14!63;UBERON:0000383!1.52e-14!63;UBERON:0001134!6.69e-14!61;UBERON:0002036!6.69e-14!61;UBERON:0003082!6.69e-14!61;UBERON:0000468!1.12e-13!659;UBERON:0003102!1.62e-13!95;UBERON:0004923!3.31e-11!57;UBERON:0000467!6.82e-11!625;UBERON:0000480!1.12e-10!626;UBERON:0000119!1.42e-09!312;UBERON:0000062!2.41e-09!511;UBERON:0000483!8.69e-09!309;UBERON:0007100!1.39e-08!27;UBERON:0004872!1.50e-08!84;UBERON:0000948!3.63e-08!24;UBERON:0005498!3.63e-08!24;UBERON:0004140!3.63e-08!24;UBERON:0009881!3.63e-08!24;UBERON:0004141!3.63e-08!24;UBERON:0003084!3.63e-08!24;UBERON:0007005!3.63e-08!24;UBERON:0004139!3.63e-08!24;UBERON:0004291!3.63e-08!24;UBERON:0000922!4.16e-08!612;UBERON:0002050!5.71e-08!605;UBERON:0005423!5.71e-08!605;UBERON:0000490!6.17e-08!138;UBERON:0000926!8.12e-08!448;UBERON:0004120!8.12e-08!448;UBERON:0006603!8.12e-08!448;UBERON:0000923!9.71e-08!604;UBERON:0005291!9.71e-08!604;UBERON:0006598!9.71e-08!604;UBERON:0002532!9.71e-08!604;UBERON:0004119!1.94e-07!169;UBERON:0000925!1.94e-07!169;UBERON:0006595!1.94e-07!169;UBERON:0001048!3.39e-07!168;UBERON:0001007!4.18e-07!155;UBERON:0001555!4.18e-07!155;UBERON:0007026!4.18e-07!155;UBERON:0000078!6.17e-07!18;UBERON:0000477!6.22e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.59e-08;25!UBERON:0002385;3.56e-08;31!UBERON:0001015;3.56e-08;31!UBERON:0000383;3.56e-08;31!UBERON:0000948;7.32e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,2.20e-18,73;UBERON:0002329,3.25e-18,71;UBERON:0003059,3.25e-18,71;UBERON:0007282,3.25e-18,71;UBERON:0004290,3.25e-18,71;UBERON:0009618,3.25e-18,71;UBERON:0003077,3.97e-18,72;UBERON:0007285,3.97e-18,72;UBERON:0002385,8.92e-16,64;UBERON:0001015,8.92e-16,64;UBERON:0000383,8.92e-16,64;UBERON:0001134,4.34e-15,62;UBERON:0002036,4.34e-15,62;UBERON:0003082,4.34e-15,62;UBERON:0007503,5.06e-15,78;UBERON:0000486,5.28e-15,83;UBERON:0005256,6.76e-15,122;UBERON:0003104,8.63e-14,160;UBERON:0009142,8.63e-14,160;UBERON:0003102,2.83e-13,99;UBERON:0002100,7.10e-13,199;UBERON:0004923,2.93e-12,66;UBERON:0000490,1.15e-09,148;UBERON:0007100,5.13e-09,27;UBERON:0004872,5.78e-09,83;UBERON:0000948,1.42e-08,24;UBERON:0005498,1.42e-08,24;UBERON:0004140,1.42e-08,24;UBERON:0009881,1.42e-08,24;UBERON:0004141,1.42e-08,24;UBERON:0003084,1.42e-08,24;UBERON:0007005,1.42e-08,24;UBERON:0004139,1.42e-08,24;UBERON:0004291,1.42e-08,24;UBERON:0000119,6.92e-08,309;UBERON:0002199,1.64e-07,46;UBERON:0002416,1.64e-07,46;UBERON:0000479,3.32e-07,773;UBERON:0000483,3.69e-07,306;UBERON:0000923,4.98e-07,560;UBERON:0010316,4.98e-07,560;UBERON:0005291,4.98e-07,560;UBERON:0006598,4.98e-07,560;UBERON:0010317,4.98e-07,560;UBERON:0002532,4.98e-07,560;UBERON:0005631,7.81e-07,14;UBERON:0000158,7.81e-07,14;UBERON:0002050,8.15e-07,564 | |||
|phase1_expression=38.8791731638991,23.5510576280081,63.8523450554749,11.0080628188443,25.9237434767827,109.914654036646,5.06599756336621,88.4407822797563,103.951880023536,9.82935746006035,7.6758128476967,337.055037196856,369.273769519835,6.80714941280256,10.9361133990212,19.4974292471015,27.121253761079,24.1002329827833,24.3966399395254,7.63350560076085,15.300051843319,8.77673220138646,0,0,3.89182182743889,0,0,0,0,0,8.97933515233241,0,1.8072355126695,1.10926203050036,0,0,0,1.66198622559563,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.65939452896706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,53.6375105890716,41.5834533016254,48.9713611860721,30.3608888003036,32.5869641913328,21.2924382872411,0,8.75942766544745,0.189069634328136,3.99112915432615,4.91874799881506,20.5637148531409,1.45718115317017,0,0,0,0,0,0,0,0,10.3228151412735,0,0,0,0,0,0,0,0,0.402829317109147,0,1.46437234528902,0,0,0,0,0,0,0,0.549605231791222,0,0,2.61656431285521,22.3637378262893,87.2484225368955,238.336525463794,121.905563818246,115.267224214466,93.6331592237653,2.1349799145941,5.18001851676036,126.662891407705,10.6421430935054,10.2980998961479,61.753830479132,25.35174067712,27.8842503882218,60.8712149819125,62.181428548345,26.7513138187724,18.4372162870711,24.1190687108516,20.5058177785283,59.4088638351739,35.8676206550362,42.4668960632396,40.3920971475898,51.6787882192184,40.9572612872112,19.4026898290384,31.6471894233644,23.1469261763134,85.0586834536442,60.5789116815556,100.527997022078,78.4242667492435,15.993937825563,20.0916391971525,36.7318708767936,39.4193336156785,14.4043726120513,18.2402976752037,30.6592242654299,29.964813869386,7.25738228637445,3.02054715999716,47.9624171063817,45.2885501320113,22.1455097841772,18.8155084033806,11.8887475908616,18.9907863387746,1.73934767846967,0.272746120590835,0.573609190778008,0.121973706129595,0.132529768321485,1.16193942869518,0.725627385107593,0,0,20.3384392028761,55.3187206845881,55.2539685409922,22.754028473567,90.2349352086982,0,0,0,0,0,0,0.134831308160164,0,0,0.738155454624648,1.40241773803446,145.285625999984,116.136881994578,0,0,1.18157981336281,0,4.67356066463832,3.94605963686609,2.08525542276389,0,0.100528972411631,2.03694579348765,6.51616610620649,18.7188261350324,1.44331342025273,0.231860809950154,34.2833387168599,2.30986316417718,0.925971025153221,0.570762456703795,0,0,0,0,0,0.93733833986777,0.335964256397719,0.141775097242386,61.974497710371,55.5110822561667,86.2611028121725,0,0,3.93923419527467,3.45887888200707,3.28230326908588,0.126995788584338,0,0,18.8179690624976,0.616964956219941,0,0,70.3061898845412,97.6550554186547,62.7775726627332,0.904902010304444,171.675094008904,32.966807349684,7.71220538096124,12.4808924293639,10.5455023447478,25.5328437641901,15.985330740966,7.00592168924923,47.750701274447,9.87888404136923,24.7559500063239,5.68627117988073,2.37585561880029,301.439377059586,225.727165777476,210.843038402958,0,0,0,15.3359907514613,17.2292903751171,39.9383334114011,32.8653566135405,21.5750138677903,32.7681562729009,0,0,0,0.128343036279748,0.76228387266739,0,0,0,0,0,0,0,12.1464576801948,23.5080144898048,7.5954206635926,14.1420185840949,8.92144943985809,4.73107245101804,18.7426263988341,6.62081419400982,4.5481500811197,16.5556914068008,5.31380478828349,10.8777809439605,16.76853759234,272.94681350306,220.298078086569,0,0,0,165.507654009658,282.940247167845,348.958398502451,68.4777549579824,45.2712821199784,33.6792113319688,110.58408580767,27.632191449602,69.9714556974693,155.838969767241,35.9308586560187,88.070615755311,71.2042442639725,86.7154896736647,53.8054052269611,3.14234568938218,1.40354529212299,1.47329582297434,12.0555170572837,22.3972136648262,55.9901251876741,0,0.231046011313244,0.784349769176855,0,0.105551628892876,0,0,0.431831832204279,0,1.08378575017541,0.501689773854853,1.27438136522519,0.831076008928724,0,0,0,2.05160100093111,2.29610251989794,0.976135183992909,8.24328093181778,0.0915694648183434,0,32.7331356657818,7.80072295243825,112.478750890912,6.86362099874066,7.08623638727364,9.05671680884164,6.06480918931935,9.13072081380326,12.1814022887952,10.5681017995965,9.25933170726069,0.495854746082934,1.34533047155574,0.382838137483752,0.809262246844399,110.633240732754,113.0176325122,23.0022299152998,20.0221827114458,46.8429306678979,17.3986598415015,2.96518750566272,5.72499546967965,45.0311626925198,21.8301803055921,9.53150969619124,111.827334803053,49.6409226119348,183.921477301191,5.49464048139461,9.35336779433237,15.9231477246912,12.9593642580255,51.3543503196223,25.3616513876813,2.52755073743389,18.0424483463148,14.8665228675083,2.11300293513511,28.2554816614531,18.8069224498438,188.723554755805,17.643690993476,63.0267026479159,74.9751013783934,38.1991852616014,21.6445268175389,10.957160355986,11.153645931591,3.3803472303869,23.2326390570563,13.754865741837,6.77674997814376,13.1261593706121,10.5553817648832,146.865522260116,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| |||
|short_description=p1@OSR1 | |||
}} |
Revision as of 01:54, 21 January 2014
Short description: | p1@OSR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_OSR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000498844_5end |
EntrezGene: | OSR1 |
HGNC: | 8111 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.49e-24 | 76 |
muscle precursor cell | 7.31e-14 | 58 |
myoblast | 7.31e-14 | 58 |
multi-potent skeletal muscle stem cell | 7.31e-14 | 58 |
muscle cell | 6.21e-13 | 55 |
smooth muscle cell | 6.34e-11 | 43 |
smooth muscle myoblast | 6.34e-11 | 43 |
electrically responsive cell | 1.02e-09 | 61 |
electrically active cell | 1.02e-09 | 61 |
vascular associated smooth muscle cell | 2.89e-08 | 32 |
preadipocyte | 1.67e-07 | 12 |
skin fibroblast | 2.54e-07 | 23 |