FFCP PHASE1:Hg19::chr19:48972612..48972632,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9266 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9502 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000474049_5end | |||
|description=CAGE_peak_1_at_CYTH2_5end | |||
|id=chr19:48972612..48972632,+ | |||
|ontology_enrichment_celltype=CL:0000115!2.47e-09!35;CL:0002139!5.92e-09!24;CL:0002078!8.21e-09!44;CL:0000220!1.56e-08!246;CL:0000071!2.64e-08!18;CL:0002546!2.64e-08!18;CL:0002321!3.59e-08!248;CL:0000222!4.12e-07!119;CL:0000359!7.22e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002139;6.82e-09;24!CL:0000071;2.76e-08;18!CL:0000115;5.32e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.21e-09,36;CL:0002078,4.13e-09,45;CL:0002139,5.92e-09,24;CL:0002321,2.48e-08,250;CL:0000071,2.64e-08,18;CL:0002546,2.64e-08,18;CL:0000222,2.88e-07,121;CL:0000359,7.22e-07,32 | |||
|ontology_enrichment_development_v019=CL:0002546;2.76e-08;18 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!1.53e-15!69;UBERON:0002049!2.86e-15!79;UBERON:0007798!2.86e-15!79;UBERON:0001981!2.64e-14!60;UBERON:0007500!2.64e-14!60;UBERON:0004537!2.64e-14!60;UBERON:0006965!2.64e-14!60;UBERON:0001637!1.00e-13!42;UBERON:0003509!1.00e-13!42;UBERON:0004572!1.00e-13!42;UBERON:0003914!7.34e-13!118;UBERON:0004872!9.78e-13!84;UBERON:0004573!1.43e-10!33;UBERON:0004571!1.43e-10!33;UBERON:0004535!3.62e-10!110;UBERON:0000025!1.34e-09!194;UBERON:0001009!1.74e-09!113;UBERON:0001986!2.64e-08!18;UBERON:0004638!2.64e-08!18;UBERON:0004852!2.64e-08!18;UBERON:0004111!2.87e-07!241;UBERON:0000947!4.14e-07!21;UBERON:0010191!4.14e-07!21;UBERON:0003081!5.60e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.66e-10;42!UBERON:0003509;3.66e-10;42!UBERON:0004572;3.66e-10;42!UBERON:0004573;1.02e-09;33!UBERON:0004571;1.02e-09;33!UBERON:0007500;7.85e-09;56!UBERON:0001981;7.85e-09;56!UBERON:0004537;7.85e-09;56!UBERON:0003914;1.34e-08;74!UBERON:0004638;2.76e-08;18!UBERON:0001986;2.76e-08;18!UBERON:0004852;2.76e-08;18!UBERON:0000055;3.66e-08;65!UBERON:0000947;3.98e-07;21!UBERON:0010191;3.98e-07;21!UBERON:0002049;5.35e-07;75!UBERON:0007798;5.35e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,8.29e-16,68;UBERON:0002049,1.68e-15,78;UBERON:0007798,1.68e-15,78;UBERON:0007500,1.39e-14,59;UBERON:0001981,1.39e-14,59;UBERON:0004537,1.39e-14,59;UBERON:0006965,1.39e-14,59;UBERON:0001637,1.00e-13,42;UBERON:0003509,1.00e-13,42;UBERON:0004572,1.00e-13,42;UBERON:0003914,5.72e-13,117;UBERON:0004872,6.39e-13,83;UBERON:0004573,1.43e-10,33;UBERON:0004571,1.43e-10,33;UBERON:0004535,2.76e-10,109;UBERON:0000025,9.98e-10,192;UBERON:0001009,1.36e-09,112;UBERON:0004638,2.64e-08,18;UBERON:0001986,2.64e-08,18;UBERON:0004852,2.64e-08,18;UBERON:0004111,1.51e-07,240;UBERON:0000947,4.14e-07,21;UBERON:0010191,4.14e-07,21;UBERON:0003081,8.79e-07,203 | |||
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| |||
|short_description=p1@CYTH2 | |||
}} |
Revision as of 00:17, 21 January 2014
Short description: | p1@CYTH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CYTH2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000474049_5end |
EntrezGene: | CYTH2 |
HGNC: | 9502 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.21e-09 | 36 |
meso-epithelial cell | 4.13e-09 | 45 |
endothelial cell of vascular tree | 5.92e-09 | 24 |
embryonic cell | 2.48e-08 | 250 |
blood vessel endothelial cell | 2.64e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.64e-08 | 18 |
mesodermal cell | 2.88e-07 | 121 |
vascular associated smooth muscle cell | 7.22e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
vessel | 8.29e-16 | 68 |
vasculature | 1.68e-15 | 78 |
vascular system | 1.68e-15 | 78 |
epithelial tube open at both ends | 1.39e-14 | 59 |
blood vessel | 1.39e-14 | 59 |
blood vasculature | 1.39e-14 | 59 |
vascular cord | 1.39e-14 | 59 |
artery | 1.00e-13 | 42 |
arterial blood vessel | 1.00e-13 | 42 |
arterial system | 1.00e-13 | 42 |
epithelial tube | 5.72e-13 | 117 |
splanchnic layer of lateral plate mesoderm | 6.39e-13 | 83 |
systemic artery | 1.43e-10 | 33 |
systemic arterial system | 1.43e-10 | 33 |
cardiovascular system | 2.76e-10 | 109 |
tube | 9.98e-10 | 192 |
circulatory system | 1.36e-09 | 112 |
blood vessel endothelium | 2.64e-08 | 18 |
endothelium | 2.64e-08 | 18 |
cardiovascular system endothelium | 2.64e-08 | 18 |
anatomical conduit | 1.51e-07 | 240 |
aorta | 4.14e-07 | 21 |
aortic system | 4.14e-07 | 21 |
lateral plate mesoderm | 8.79e-07 | 203 |