FFCP PHASE1:Hg19::chr19:46627914..46627955,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=388555 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32930 | |||
|TSSclassifier=not | |||
|UniProt=Q6UXB1 | |||
|association_with_transcript=0bp_to_ENST00000341415,NM_207393,uc002pea.1_5end | |||
|coexpression_cluster_id=C405 | |||
|description=CAGE_peak_1_at_IGFL3_5end | |||
|id=chr19:46627914..46627955,- | |||
|ontology_enrichment_celltype=CL:0000055!7.72e-13!180;CL:0000144!1.81e-10!625;CL:0002334!1.72e-09!12;CL:0002159!4.46e-09!13;CL:0000057!6.12e-09!75;CL:0002371!6.35e-09!591;CL:0000548!1.04e-08!679;CL:0000004!1.04e-08!679;CL:0000255!1.04e-08!679;CL:0000012!1.80e-08!682;CL:0000220!7.21e-08!246;CL:0002321!1.17e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002334;6.00e-17;12!CL:0002159;8.67e-13;14!CL:0002580;2.21e-09;3!CL:0002579;1.70e-08;3!CL:0000362;2.04e-08;9!CL:0002327;1.31e-07;4!CL:0000317;5.37e-07;2!CL:1000448;5.37e-07;2!CL:0002308;5.37e-07;2!CL:0002140;5.37e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,5.25e-17,12;CL:0002159,9.50e-13,14;CL:0002580,1.90e-09,3;CL:0000362,2.11e-08,9;CL:0002579,2.19e-08,3;CL:0002327,1.29e-07,4;CL:0000317,5.54e-07,2;CL:1000448,5.54e-07,2;CL:0002308,5.54e-07,2;CL:0002140,5.54e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.16e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;7.41e-09;14!DOID:3350;3.07e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.52e-09,14;DOID:3350,3.08e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002199!5.39e-11!45;UBERON:0002416!5.39e-11!45;UBERON:0002097!8.59e-10!40;UBERON:0003102!1.36e-07!95;UBERON:0003688!2.23e-07!6;UBERON:0002358!2.23e-07!6;UBERON:0003684!2.23e-07!6;UBERON:0001178!2.23e-07!6;UBERON:0000475!3.30e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.07e-10;6!UBERON:0002358;1.07e-10;6!UBERON:0003684;1.07e-10;6!UBERON:0001178;1.07e-10;6!UBERON:0001911;1.31e-07;4!UBERON:0004457;4.99e-07;9!UBERON:0000042;4.99e-07;9!UBERON:0002419;5.37e-07;2!UBERON:0007771;5.37e-07;2!UBERON:0003297;5.37e-07;2!UBERON:0001821;5.37e-07;2!UBERON:0003487;5.37e-07;2!UBERON:0001820;5.37e-07;2!UBERON:0005406;7.72e-07;2!UBERON:0001003;9.52e-07;15!UBERON:0007376;9.52e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.07e-10,6;UBERON:0002358,2.07e-10,6;UBERON:0003684,2.07e-10,6;UBERON:0001178,2.07e-10,6;UBERON:0001911,1.29e-07,4;UBERON:0005333,1.29e-07,4;UBERON:0008425,1.29e-07,4;UBERON:0005311,1.29e-07,4;UBERON:0002419,5.54e-07,2;UBERON:0007771,5.54e-07,2;UBERON:0003297,5.54e-07,2;UBERON:0001821,5.54e-07,2;UBERON:0003487,5.54e-07,2;UBERON:0001820,5.54e-07,2;UBERON:0005089,5.54e-07,2;UBERON:0005088,5.54e-07,2;UBERON:0005406,6.79e-07,2;UBERON:0001003,9.90e-07,15;UBERON:0007376,9.90e-07,15;UBERON:0007383,9.90e-07,15 | |||
|phase1_expression=0.181678379270557,0.642301571672949,1.12763523276777,1.0007329835313,0.893922188854576,13.9574163856059,2.53299878168311,0,0.261185628199839,0.245733936501509,0,0.218441372130172,1.84636884759917,0,0,0.672325146451775,0,0.730310090387373,0,7.01790031037691,12.2400414746552,0.626909442956176,0,0,0.251085279189606,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,2.18577172975525,0.370784442784429,0.324547393654683,0.174129737299267,0.398873881556595,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0.12663051166458,0.397227542439656,0,0.709336764396714,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0.113432183160021,0.538168907066586,0,0.211931901159562,0.300091096084402,0.412210116953756,0,0.558350568994769,0.168776332241266,0.292311015483596,0.252433774244115,0.276149695926898,0,1.77504796258307,2.21654616100809,0.339121184620975,3.86521706326594,8.45512973831587,0.573609190778008,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0.122988438543114,0,875.807277560832,13.4882103909143,122.846404287013,0,0,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0,499.746831391607,14.319284821481,7.88114999785065,53.476644686569,159.870577211893,0,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0,0,0,0,0,0,2.06834745212444,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,3.31583314765545,1.74306691720059,15.4958136332188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,6.82222512167955,0,0,1.47495334833363,0.0868836144680828,0,0,0,0,0,0,0,0,2.97729369382532,9.51464234385987,5.3325417942284,1.02511319404561,1.53512174720011,2.2519548960105,2.96836132889982,0,2.30830242907065,0.410635780069046,1.55776328755086,0,0,3.60911646545913,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54941678891006,0.247528499761764,3.44559322797703,33.8031327938991,0,0,0,0,0.137836572484531,0.322260734604821,0.145016693914229,0,0.0890320356467374,0.165284915360978,0,0.127612712494584,0.2023155617111,0.929691098594572,0.31481234683064,0.6970372701606,0.308033580176089,1.06461206063404,0,0,0.143124886741991,0,0,1.14378116354295,1.535386747868,0.42793898803392,0,0,0,1.09814811894422,0.706874414074119,0.606547444719948,0,0.421258456238981,0,0,0,0,0,0,0.551365343546124,0,0,0.578775534266688,0,0,0.30982349809975,0,1.86434757865267,0.392996164052485,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,3.63201841833409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,63.759873254654,0,0,0,0.102268682502155,0,0.311039587661807,0.539210106883961,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,2.27884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0.195984794828755,1.21882889212564,0,97.8600524763498,0,0,0,0,0.0882561266915003,0,0.548167698587004,0,0,0,0.320635281006135,0,1.59847687665704,0,0.343609788497747,0,0,0,0,1.22313785466253,0.732219924186332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5295962733569,0,0,0,0,0,0,0,0,0,0,0,1.799791132412,0.77380195455795,0,2.34804281319486,0,0,0,0,0,0,0,460.480321692752,0,0,0,0,0,6.47474482784602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,1.16856654923612,0,0,0,0,0.228840068396924,0,0.310874401165561,0,0.477890301491107,0.899606224327209,5.27894053379282,0,4.25346743292792,1.04349012362347,13.6734424187469,1.14241563650639,1.22061219961398,0.363697318405119,9.3447184626965,0.928067519756987,0,0,0,0,0,0.192619830407303,0.214441591374926,0,0,0.926089897295336,0,0,0.617602894321944,0.877136198314828,1.23682402162117,6.75199133948202,0,0,1.0362910251936,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,1.90691047733584,0,0,0,26.6250690688646,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.863710364874486,0,0,0,0,0,0,0.414432328326074,0.3414369541879,4.14755797088455,0,0,0,0,0,0,0.955538938977433,0.111855431797792,0,0,0,0,0,6.31424290976881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0.865253124247578,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0.193766729508018,0.0620747142958579,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@IGFL3 | |||
}} |
Revision as of 00:01, 21 January 2014
Short description: | p1@IGFL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IGFL3_5end |
Coexpression cluster: | C405_Keratinocyte_Mammary_Sebocyte_tongue_Corneal_Mallassezderived_Gingival |
Association with transcript: | 0bp_to_ENST00000341415, NM_207393, uc002pea.1_5end |
EntrezGene: | IGFL3 |
HGNC: | 32930 |
UniProt: | Q6UXB1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 5.25e-17 | 12 |
general ecto-epithelial cell | 9.50e-13 | 14 |
preadipocyte of the breast | 1.90e-09 | 3 |
epidermal cell | 2.11e-08 | 9 |
omentum preadipocyte | 2.19e-08 | 3 |
mammary gland epithelial cell | 1.29e-07 | 4 |
sebum secreting cell | 5.54e-07 | 2 |
epithelial cell of sweat gland | 5.54e-07 | 2 |
epithelial cell of skin gland | 5.54e-07 | 2 |
acinar cell of sebaceous gland | 5.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.07e-10 | 6 |
peritoneum | 2.07e-10 | 6 |
abdominal cavity | 2.07e-10 | 6 |
visceral peritoneum | 2.07e-10 | 6 |
mammary gland | 1.29e-07 | 4 |
mammary bud | 1.29e-07 | 4 |
mammary ridge | 1.29e-07 | 4 |
mammary placode | 1.29e-07 | 4 |
skin gland | 5.54e-07 | 2 |
epidermis gland | 5.54e-07 | 2 |
gland of integumental system | 5.54e-07 | 2 |
sebaceous gland | 5.54e-07 | 2 |
skin sebaceous gland | 5.54e-07 | 2 |
sweat gland | 5.54e-07 | 2 |
sweat gland placode | 5.54e-07 | 2 |
sebaceous gland placode | 5.54e-07 | 2 |
perirenal fat | 6.79e-07 | 2 |
skin epidermis | 9.90e-07 | 15 |
outer epithelium | 9.90e-07 | 15 |
enveloping layer of ectoderm | 9.90e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.52e-09 | 14 |
mesenchymal cell neoplasm | 3.08e-07 | 2 |