FFCP PHASE1:Hg19::chr19:34175642..34175654,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64377 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15993 | |||
|TSSclassifier=weak | |||
|UniProt=Q9H2A9 | |||
|association_with_transcript=208bp_to_ENST00000262622,NM_022467,uc002nuu.2_5end | |||
|coexpression_cluster_id=C85 | |||
|description=CAGE_peak_3_at_CHST8_5end | |||
|id=chr19:34175642..34175654,+ | |||
|ontology_enrichment_celltype=CL:0002553!1.86e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000123;5.04e-34;2!CL:0000242;5.04e-34;2!CL:0002535;7.05e-34;2!CL:0000333;1.40e-14;5!CL:0000312;1.60e-14;5!CL:0000240;2.45e-12;6!CL:0000311;2.45e-12;6!CL:0000079;2.45e-12;6!CL:0000237;2.45e-12;6!CL:0000362;1.12e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,5.04e-34,2;CL:0002535,7.05e-34,2;CL:0000312,1.60e-14,5;CL:0000240,2.45e-12,6;CL:0000311,2.45e-12,6;CL:0000079,2.45e-12,6;CL:0000237,2.45e-12,6;CL:0000036,2.45e-12,6;CL:0000357,2.45e-12,6;CL:0000114,2.45e-12,6;CL:0000362,1.12e-08,9;CL:0000333,2.86e-07,41 | |||
|ontology_enrichment_development_v019=CL:0000357;2.45e-12;6!CL:0000114;2.45e-12;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;1.83e-14;5!DOID:169;2.19e-12;6!DOID:171;5.73e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,1.83e-14,5;DOID:169,2.19e-12,6;DOID:171,5.73e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.32e-56!57;UBERON:0005068!2.32e-56!57;UBERON:0006241!2.32e-56!57;UBERON:0007135!2.32e-56!57;UBERON:0001017!9.49e-48!82;UBERON:0000073!1.78e-47!94;UBERON:0001016!1.78e-47!94;UBERON:0001869!5.55e-46!32;UBERON:0005743!2.49e-45!86;UBERON:0002616!2.73e-45!59;UBERON:0000955!6.17e-45!69;UBERON:0006238!6.17e-45!69;UBERON:0002780!7.02e-45!41;UBERON:0001890!7.02e-45!41;UBERON:0006240!7.02e-45!41;UBERON:0003080!9.63e-44!42;UBERON:0002020!2.94e-43!34;UBERON:0003528!2.94e-43!34;UBERON:0001893!3.77e-43!34;UBERON:0001950!8.75e-43!20;UBERON:0002791!2.48e-39!33;UBERON:0003075!3.42e-39!86;UBERON:0007284!3.42e-39!86;UBERON:0002619!7.68e-39!22;UBERON:0002346!3.08e-37!90;UBERON:0000956!4.62e-34!25;UBERON:0000203!4.62e-34!25;UBERON:0003056!1.37e-32!61;UBERON:0004121!2.55e-26!169;UBERON:0000924!1.37e-25!173;UBERON:0006601!1.37e-25!173;UBERON:0007023!1.86e-23!115;UBERON:0000200!2.17e-23!6;UBERON:0000033!2.62e-23!123;UBERON:0000153!5.28e-22!129;UBERON:0007811!5.28e-22!129;UBERON:0002771!8.98e-18!3;UBERON:0001871!1.04e-17!7;UBERON:0000025!5.72e-16!194;UBERON:0000369!9.05e-14!4;UBERON:0002435!9.05e-14!4;UBERON:0000204!9.05e-14!4;UBERON:0010082!9.05e-14!4;UBERON:0003076!2.53e-13!15;UBERON:0003057!2.53e-13!15;UBERON:0000007!5.61e-13!2;UBERON:0004111!8.44e-12!241;UBERON:0002298!1.61e-11!8;UBERON:0000064!4.46e-11!219;UBERON:0000483!6.05e-11!309;UBERON:0002021!8.35e-11!5;UBERON:0000119!8.78e-11!312;UBERON:0001872!8.93e-11!5;UBERON:0002420!1.38e-10!9;UBERON:0007245!1.38e-10!9;UBERON:0010009!1.38e-10!9;UBERON:0010011!1.38e-10!9;UBERON:0000454!1.38e-10!9;UBERON:0002308!1.45e-10!9;UBERON:0000125!1.45e-10!9;UBERON:0000477!4.34e-09!286;UBERON:0005383!5.47e-09!3;UBERON:0005382!5.47e-09!3;UBERON:0002240!5.92e-09!3;UBERON:0000988!7.78e-09!3;UBERON:0000475!2.93e-08!365;UBERON:0001896!3.70e-08!3;UBERON:0005290!3.70e-08!3;UBERON:0010096!3.70e-08!3;UBERON:0009663!4.54e-08!7;UBERON:0004733!1.02e-07!12;UBERON:0002028!1.02e-07!12;UBERON:0007277!1.02e-07!12;UBERON:0001874!2.52e-07!1;UBERON:0004732!3.95e-07!13;UBERON:0002022!5.45e-07!1;UBERON:0003296!6.70e-07!4;UBERON:0010133!6.70e-07!4;UBERON:0007190!6.88e-07!1;UBERON:0002581!7.29e-07!1;UBERON:0001882!7.73e-07!1;UBERON:0005403!7.73e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;7.05e-34;2!UBERON:0004801;7.05e-34;2!UBERON:0000013;1.40e-14;5!UBERON:0002410;1.40e-14;5!UBERON:0000002;2.74e-12;6!UBERON:0001560;2.74e-12;6!UBERON:0000010;1.04e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,7.05e-34,2;UBERON:0004801,7.05e-34,2;UBERON:0000013,1.40e-14,5;UBERON:0002410,1.40e-14,5;UBERON:0000002,2.74e-12,6;UBERON:0001560,2.74e-12,6;UBERON:0000010,1.04e-08,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,1.25966373927138,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.723578631752448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.3755727921195,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,6.08668320165466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,7.54576790691545,0.431299245586727,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.128458450192919,0,0,0.41023272848151,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0.206686796501184,0.253663240775627,0,0,0,0,0,0,0,0.606965604236632,0.455324382702595,0,0,0,0.679697329768317,0.131545547125698,0,0,0,0.471346769748006,0,0,0,0,0,0.790068058663633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219881033490858,0,0,0,0,0,0,0,0.297046400327086,0.8453114551668,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@CHST8 | |||
}} |
Revision as of 22:38, 20 January 2014
Short description: | p3@CHST8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CHST8_5end |
Coexpression cluster: | C85_neuroblastoma_carcinoid_retinoblastoma_small_pineal_rhabdomyosarcoma_medulloblastoma |
Association with transcript: | 208bp_to_ENST00000262622, NM_022467, uc002nuu.2_5end |
EntrezGene: | CHST8 |
HGNC: | 15993 |
UniProt: | Q9H2A9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 5.04e-34 | 2 |
epithelial cell of cervix | 7.05e-34 | 2 |
keratinocyte | 1.60e-14 | 5 |
stratified squamous epithelial cell | 2.45e-12 | 6 |
keratin accumulating cell | 2.45e-12 | 6 |
stratified epithelial cell | 2.45e-12 | 6 |
keratinizing barrier epithelial cell | 2.45e-12 | 6 |
epithelial fate stem cell | 2.45e-12 | 6 |
stratified epithelial stem cell | 2.45e-12 | 6 |
surface ectodermal cell | 2.45e-12 | 6 |
epidermal cell | 1.12e-08 | 9 |
migratory neural crest cell | 2.86e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 7.05e-34 | 2 |
cervix epithelium | 7.05e-34 | 2 |
sympathetic nervous system | 1.40e-14 | 5 |
autonomic nervous system | 1.40e-14 | 5 |
uterine cervix | 2.74e-12 | 6 |
neck of organ | 2.74e-12 | 6 |
peripheral nervous system | 1.04e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 1.83e-14 | 5 |
neuroendocrine tumor | 2.19e-12 | 6 |
neuroectodermal tumor | 5.73e-08 | 10 |