FFCP PHASE1:Hg19::chr19:33463213..33463226,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91442 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28467 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BTP7 | |||
|association_with_transcript=65bp_to_ENST00000254262,NM_152266,uc002nud.3_5end | |||
|description=CAGE_peak_2_at_C19orf40_5end | |||
|id=chr19:33463213..33463226,+ | |||
|ontology_enrichment_celltype=CL:0000548!5.23e-13!679;CL:0000004!5.23e-13!679;CL:0000255!5.23e-13!679;CL:0000012!5.78e-13!682;CL:0000003!1.01e-09!722;CL:0000144!1.10e-09!625 | |||
|ontology_enrichment_celltype_v019=CL:0000511;2.44e-09;1!CL:0002625;2.44e-09;1!CL:0000216;2.44e-09;1!CL:0002599;2.44e-09;1!CL:0000148;9.69e-08;10!CL:0002322;2.59e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,1.21e-09,1;CL:0002625,1.21e-09,1;CL:0000216,1.21e-09,1;CL:0002599,1.56e-09,1;CL:0000148,1.63e-07,10;CL:0000541,1.63e-07,10;CL:0002322,4.71e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060085;2.44e-09;1!DOID:3165;2.44e-09;1!DOID:0060121;2.44e-09;1!DOID:2438;2.44e-09;1!DOID:4418;2.44e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,3.00e-09,1;DOID:3165,3.00e-09,1;DOID:0060121,3.00e-09,1;DOID:2438,3.00e-09,1;DOID:4418,3.00e-09,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.44e-09;1!UBERON:0001343;2.44e-09;1!UBERON:0004910;2.44e-09;1!UBERON:0004813;2.44e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.21e-09,1;UBERON:0001343,1.21e-09,1;UBERON:0004910,1.21e-09,1;UBERON:0005154,1.21e-09,1;UBERON:0005295,1.21e-09,1;UBERON:0004813,1.21e-09,1;UBERON:0005297,1.21e-09,1;UBERON:0005294,1.21e-09,1;UBERON:0010141,1.21e-09,1;UBERON:0005891,1.21e-09,1 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0.730310090387373,0,0.246242116153576,0,0,1.14494394852423,0.821246550437305,0.125542639594803,0,0.738905305049512,0.393553906568396,0,0.383829398097213,0.309632246632152,0,0,0,0.232401601740905,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0.211255286311942,0.425208599930087,0,0,0,0.16072558669708,0.285012743741249,0,0,0,0,0,0.426730222566507,0,0,1.32208974556972,0,0,0.587237189370939,0.382273228125229,0,0,0.263384084775077,0.393419540227666,0,0.822405995998037,0.334372990781356,0,0,0,0,0,0.221533894583621,0,0,0,0,0.276350017785848,0.289803085735052,0,0,0,0.113309342697566,0.383220493601921,0,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0,0,0,0,0,0.267440195783507,0.579297615531196,0,0.670700859703636,0,0.722878304769133,0,0.144846518960824,0.795285947051099,0,1.03988298880475,0,0.263504357079378,0.0654895377488563,0,0,0,0.174129737299267,0,0,0,0,0.198762407366705,0,0.694281003215189,0,0,0.275118041940067,0.835979866147242,0.516833518338658,0,0,0.402829317109147,0,0,0,0,0.357198913136319,0.22452937262617,0.450445921933289,1.53316637465883,0,0.366403487860815,1.31780417436063,0,0.436094052142534,0.496971951695318,0,0.132409180813219,0.860509862246441,0.354668382198357,0.560677600142307,1.06748995729705,0.24666754841716,0,0.134710672069688,0.163461903113459,0.302714855289863,0,0,0,0.570471821544449,0.149448680551801,0.117434498643765,0.161872944368132,0.280901613404497,0,0.368502951935304,0,0,0,0,0,0.505008341862199,0.250237039743928,0.277064115484183,0,0,0.150238058906597,0.113432183160021,0.358779271377724,0.213557388818567,0.211931901159562,0,0.206105058476878,0.257640540045629,0,0,0,0,0.460249493211497,0.161646056818812,0,0.403008392910561,0.339121184620975,0.193260853163297,0.545492241181669,0.286804595389004,0.975789649036763,0.530119073285941,0.69716365721711,1.0366105501537,1.00928340350251,0,0,0,0,0.464367928031979,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0.171567810298526,0.658501712451753,0,0.100528972411631,0.0925884451585296,0,0,0,0.231860809950154,0,0.144366447761074,0,0.570762456703795,0,0,0.246217006087397,0.234004265139238,0,0,0.335964256397719,0,0.179117045405697,0,0.766765358330422,0.492663237895943,0,0,0.144119953416961,0,0.190493682876507,1.14596527667483,0,0,0.514137463516618,0.300343057843917,0.285826432630578,0.112131084345361,0,0.1466765716419,0.129271715757778,0,0.845302752556,0,0,0.771622122786426,0,0.266422179016099,0,0,0.823240336780769,0.325736184293735,0,0.791951872933429,0,0,0.199945982364114,0,0,0,0,0,0,0.434343920002738,0,0.895304816199478,0,0.197030760201927,0.215627574859517,1.02674429023799,0,0,0,0.335032530668698,0.637938751653163,0,0,0.414415513436035,0,0.500170521059677,0.271265023699736,0,0,0,0,0,0,0,0.664225598535437,0.184369168541703,0.173767228936166,0,0.343143423810856,0.206768026122887,0.215714200818617,0.106727557803444,0.303127571446259,0,0,0.744323423456331,0.153461973288062,0.280660094433074,0,0,0.160853921143607,0,0.308419387605311,0,0.164254312027618,0,0.581051892299796,0.483437798366489,0.200506470303285,0,0.229628896329213,0.364182336013434,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0.431831832204279,0,0,0.501689773854853,0,0,0,0.219259876645935,0.261435451024901,0.512900250232778,0.328014645699706,0,0,0.54941678891006,0.495056999523528,0.574265537996172,0,1.6068392984416,0.193341436584244,0.308097234229289,1.07452572308291,0.275673144969061,0.322260734604821,0.145016693914229,0.170453254832202,0.445160178233687,0,0.192190067365106,0,0.10115778085555,0,0.62962469366128,0,0,0,1.73986598415015,0,0.143124886741991,0,0,0,0,0,0.636406495851874,0,0.539617372749944,0,0.235624804691373,0.202182481573316,0,0,1.46290121726877,0.487426979262569,0,0.409499734223957,0.141405431953713,0,0,0.66343897524122,0,0,0,0,0,0.563391205064483,0.573645408816206,0.0982490410131212,0,0,0.211107635297664,0.329294892959902,0.75894634753143,0,0.0962221127255121,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0.185803175125719,0,0,0,0,0,0.211673582723883,0,0,0.228234679033192,0,0,0.169291777801603,0.1605880751037,0.201799707191048,0.425846237690326,0.343505344755765,0,0,0,0,0.278406173895242,0,1.35227839237992,0,1.4098700508785,0.18714054040822,0,0.36408156524854,0.66866030566487,0,0,0.593929361665277,0,0,0,0.111308705022906,0,0,0,0,0.251932747854276,0.20453736500431,0.246169610922139,0,0.0898683511473268,0.358042349351218,0.511572370226872,0,0,0,0,0.0927680981618513,0,0,0.174919999992391,0,0.455173793141999,0.254253650292766,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0.341826167541004,0.23056390438806,0.0897576444097721,0.108647371922008,0,0.274792780205587,0,0,0.156980256395025,0,0.225595660617181,0.392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| |||
|short_description=p2@C19orf40 | |||
}} |
Revision as of 22:36, 20 January 2014
Short description: | p2@C19orf40 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C19orf40_5end |
Coexpression cluster: | NA |
Association with transcript: | 65bp_to_ENST00000254262, NM_152266, uc002nud.3_5end |
EntrezGene: | C19orf40 |
HGNC: | 28467 |
UniProt: | Q9BTP7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.21e-09 | 1 |
seminiferous tubule epithelial cell | 1.21e-09 | 1 |
Sertoli cell | 1.21e-09 | 1 |
smooth muscle cell of the esophagus | 1.56e-09 | 1 |
melanocyte | 1.63e-07 | 10 |
melanoblast | 1.63e-07 | 10 |
embryonic stem cell | 4.71e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.21e-09 | 1 |
seminiferous tubule of testis | 1.21e-09 | 1 |
epithelium of male gonad | 1.21e-09 | 1 |
epithelial cord | 1.21e-09 | 1 |
sex cord | 1.21e-09 | 1 |
seminiferous tubule epithelium | 1.21e-09 | 1 |
testis sex cord | 1.21e-09 | 1 |
genital ridge | 1.21e-09 | 1 |
primitive sex cord of indifferent gonad | 1.21e-09 | 1 |
coelomic epithelium | 1.21e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 3.00e-09 | 1 |
skin benign neoplasm | 3.00e-09 | 1 |
integumentary system benign neoplasm | 3.00e-09 | 1 |
dermis tumor | 3.00e-09 | 1 |
cutaneous fibrous histiocytoma | 3.00e-09 | 1 |