FFCP PHASE1:Hg19::chr19:19303794..19303805,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8625 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9987 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=15bp_to_ENST00000545522_5end | |||
|description=CAGE_peak_5_at_RFXANK_5end | |||
|id=chr19:19303794..19303805,+ | |||
|ontology_enrichment_celltype=CL:0002321!1.47e-17!248;CL:0000220!6.31e-17!246;CL:0000222!1.03e-15!119;CL:0000055!1.75e-13!180;CL:0002139!1.06e-11!24;CL:0000115!1.11e-11!35;CL:0000548!2.95e-11!679;CL:0000004!2.95e-11!679;CL:0000255!2.95e-11!679;CL:0000144!4.91e-11!625;CL:0000012!5.81e-11!682;CL:0000213!1.76e-10!57;CL:0000215!1.76e-10!57;CL:0000071!7.22e-10!18;CL:0002546!7.22e-10!18;CL:0002078!1.94e-09!44;CL:0002371!5.31e-09!591;CL:0000680!1.43e-07!57;CL:0000056!1.43e-07!57;CL:0000355!1.43e-07!57;CL:0000183!2.40e-07!59;CL:0000393!3.73e-07!60;CL:0000211!3.73e-07!60;CL:0000187!5.86e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.32e-21;24!CL:0000115;7.42e-20;36!CL:0000071;2.60e-15;18!CL:0002078;3.09e-15;45!CL:0000213;4.21e-12;58!CL:0000215;4.21e-12;58!CL:0002138;5.75e-08;6!CL:1000413;2.02e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.01e-25,36;CL:0002139,1.16e-22,24;CL:0002078,1.61e-22,45;CL:0000213,6.16e-22,58;CL:0000215,6.16e-22,58;CL:0000222,1.16e-17,121;CL:0000071,2.39e-16,18;CL:0002546,2.39e-16,18;CL:0002321,2.07e-11,250;CL:1000413,5.04e-08,9;CL:0005020,6.14e-08,6;CL:0002138,6.14e-08,6;CL:0005022,6.14e-08,6;CL:0002539,7.96e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002546;2.60e-15;18!CL:0005022;5.75e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.73e-16!79;UBERON:0007798!1.73e-16!79;UBERON:0000055!4.22e-13!69;UBERON:0001981!2.43e-11!60;UBERON:0007500!2.43e-11!60;UBERON:0004537!2.43e-11!60;UBERON:0006965!2.43e-11!60;UBERON:0004535!8.55e-11!110;UBERON:0004872!9.20e-11!84;UBERON:0001009!4.33e-10!113;UBERON:0001986!7.22e-10!18;UBERON:0004638!7.22e-10!18;UBERON:0004852!7.22e-10!18;UBERON:0000490!6.48e-09!138;UBERON:0000486!4.12e-08!82;UBERON:0001637!9.20e-08!42;UBERON:0003509!9.20e-08!42;UBERON:0004572!9.20e-08!42;UBERON:0003914!1.62e-07!118;UBERON:0000914!1.92e-07!83;UBERON:0002329!1.92e-07!83;UBERON:0003077!1.92e-07!83;UBERON:0003059!1.92e-07!83;UBERON:0007282!1.92e-07!83;UBERON:0009618!1.92e-07!83;UBERON:0007285!1.92e-07!83;UBERON:0004290!3.21e-07!70;UBERON:0000487!4.87e-07!22;UBERON:0001134!5.15e-07!61;UBERON:0002036!5.15e-07!61;UBERON:0003082!5.15e-07!61;UBERON:0000947!7.35e-07!21;UBERON:0010191!7.35e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.60e-15;18!UBERON:0001986;2.60e-15;18!UBERON:0004852;2.60e-15;18!UBERON:0000487;6.54e-12;22!UBERON:0006914;8.46e-12;25!UBERON:0002049;9.61e-10;75!UBERON:0007798;9.61e-10;75!UBERON:0000055;1.09e-09;65!UBERON:0001473;1.85e-08;8!UBERON:0004536;1.85e-08;8!UBERON:0006558;1.85e-08;8!UBERON:0007500;2.31e-08;56!UBERON:0001981;2.31e-08;56!UBERON:0004537;2.31e-08;56!UBERON:0000490;6.05e-08;33!UBERON:0003914;1.14e-07;74!UBERON:0003915;2.02e-07;9!UBERON:0004700;2.02e-07;9!UBERON:0001917;2.02e-07;9!UBERON:0000947;2.21e-07;21!UBERON:0010191;2.21e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,1.02e-22,78;UBERON:0007798,1.02e-22,78;UBERON:0000055,8.62e-20,68;UBERON:0004638,2.39e-16,18;UBERON:0001986,2.39e-16,18;UBERON:0004852,2.39e-16,18;UBERON:0004535,2.56e-15,109;UBERON:0001009,1.27e-14,112;UBERON:0007500,1.46e-14,59;UBERON:0001981,1.46e-14,59;UBERON:0004537,1.46e-14,59;UBERON:0006965,1.46e-14,59;UBERON:0000487,9.91e-13,22;UBERON:0006914,1.92e-12,25;UBERON:0004872,3.62e-11,83;UBERON:0003914,8.54e-09,117;UBERON:0001637,1.79e-08,42;UBERON:0003509,1.79e-08,42;UBERON:0004572,1.79e-08,42;UBERON:0001473,1.82e-08,8;UBERON:0004536,1.82e-08,8;UBERON:0006558,1.82e-08,8;UBERON:0003915,5.04e-08,9;UBERON:0004700,5.04e-08,9;UBERON:0001917,5.04e-08,9;UBERON:0000947,8.74e-08,21;UBERON:0010191,8.74e-08,21;UBERON:0000490,2.15e-07,148;UBERON:0004573,2.23e-07,33;UBERON:0004571,2.23e-07,33;UBERON:0004237,7.96e-07,10;UBERON:0004695,7.96e-07,10;UBERON:0002111,7.96e-07,10;UBERON:0004178,7.96e-07,10 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0,0,0.893922188854576,0,0,0,0,0.245733936501509,0.697801167972428,0.218441372130172,0,0.37129905888014,0.662794751455832,1.34465029290355,1.20538905604795,0.730310090387373,3.41552959153355,1.23121058076788,1.63200552995402,2.19418305034661,0.572471974262113,0.547497700291537,0.376627918784408,0.152826811495903,0,0.157421562627358,0,0,0,0,0.30120591877825,0.739508020333575,0,0.142169232487422,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.222820913770347,0.294605907474837,0.221533894583621,0.270803863765016,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0.651083453856419,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0.722878304769133,0,0,0,0,0.661743720148475,1.10864698731282,0.87834785693126,0.0654895377488563,0.364295288292542,0.370784442784429,0,0,0.132957960518865,0,0,0,0.198762407366705,1.72046919021225,1.38856200643038,1.69592382577203,2.93649605346934,1.92582629358047,0.417989933073621,1.03366703667732,1.42306505074684,1.33888245105868,1.61131726843659,1.52054421143703,1.46437234528902,0.735326160691737,3.24056779152704,0.714397826272638,1.12264686313085,0.450445921933289,3.06633274931766,1.89853131913626,1.46561395144326,0,0,0,0,0.759783069987479,0.264818361626438,0.286836620748814,0.354668382198357,0.560677600142307,1.06748995729705,1.97334038733728,0,0.942974704487816,0.163461903113459,0.908144565869588,1.15235184896,0.937285727335186,0.936480230490962,1.1409436430889,0,0,0.161872944368132,0.140450806702248,0.204154171254893,0.368502951935304,0,0,0.494533858557114,0,2.87447256726495,0.336672227908132,0.125118519871964,0,0,0.30648779579902,0.300476117813194,0.340296549480063,0,0.427114777637135,0.423863802319124,0,0.618315175430633,0.515281080091258,0.37223371266318,0.168776332241266,0.584622030967192,0.504867548488229,0.552299391853796,0.80823028409406,1.06502877754984,0.10075209822764,0.339121184620975,0.193260853163297,0.272746120590835,0.573609190778008,0.853815942907168,0.927708378250397,0.813357600086629,0.621966330092223,2.01856680700503,0.36497735907583,0,1.92972281457866,1.38134921352481,0,0,0.236613600079688,0.168584690078102,0.723033089650446,0.220587945464788,0.871517776369625,0.237270619111097,0.404493924480493,0.588664395376038,0.38474715694639,1.4763109092493,2.80483547606892,2.057870056657,0,0,0,0,0,0,1.02940686179115,0.548751427043128,0,0.301586917234893,0.0925884451585296,0.651616610620649,1.03993478527958,0,0.695582429850461,1.87853910777315,3.03169540298255,0,1.71228737011138,0.790204397959275,0,0,0,0,0.93733833986777,0.335964256397719,0.567100388969546,0.0895585227028483,0,0.766765358330422,0,0.088048434013226,0,0,0.12624243342638,0,0,1.17217447210047,0,0.102827492703324,0,0.285826432630578,0.672786506072164,0.87192013766656,0.4400297149257,1.29271715757778,0,0.845302752556,0.26593811658487,1.04007436911366,0.771622122786426,0,1.5985330740966,0.428933980974443,1.62786481617433,0,0.325736184293735,0,0,0.602878754119172,0,0,1.2162378064119,0,0,1.4377491329495,1.14861935834114,0,0.579125226670317,1.02738161275192,0.358121926479791,0.112085143993527,0,0,0.128343036279748,1.27047312111232,0,0,0.167516265334349,0,0,0,0,0.12269149171914,1.50051156317903,0.542530047399471,0,0.713715955188647,0.946214490203608,0.35142424497814,0.300946099727719,0,2.0694614258501,1.32845119707087,0.553107505625109,0.347534457872331,0.979005787313703,0.343143423810856,0,0,0,0,1.66435439510497,0.30239029332968,0.496215615637554,0.306923946576125,0,0.896974044789907,1.02341449813341,0.965123526861645,0,0.462629081407967,0.532685175939381,0.328508624055237,0.519254429183621,0.348631135379878,0.362578348774867,0.601519410909855,0,2.18147451512753,1.27463817604702,0.655622074797121,0,0.15403067420883,2.35304930753057,2.92278449306521,0.105551628892876,2.27466768141793,1.36074964221213,0.647747748306418,0,0.270946437543853,0,0,0,0.895499018888713,0.219259876645935,0.261435451024901,0.256450125116389,0.656029291399411,0,0.103041011647722,0.824125183365091,0.660075999364704,0.574265537996172,1.30012049207304,0,1.16004861950546,0.770243085573222,0.15350367472613,0.137836572484531,0.966782203814463,0.725083469571143,0.511359764496605,1.60257664164127,0.991709492165869,0.192190067365106,0.638063562472921,0.10115778085555,0.929691098594572,0.62962469366128,0,1.84820148105653,2.12922412126809,1.73986598415015,0.55597265731176,0.429374660225974,0,0.632758849437452,0.762520775695299,0.255897791311334,0.42793898803392,0,0,0.359744915166629,0.823611089208164,0.471249609382746,0.404364963146632,0,1.26377536871694,0.975267478179181,1.46228093778771,3.16950440270266,0.545999645631943,0.707027159768564,0,0,0,0.876901770507525,0.578775534266688,0,0.608731130888112,1.8589409885985,0.563391205064483,0.143411352204052,0.687743287091848,0.35667105148125,0.354761064070598,0.211107635297664,0,1.13841952129715,2.44954304171488,0.48111056362756,0.670302275535787,0,0,1.29151611801369,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,2.67060177818683,0,0,0.743212700502875,0.144269212976445,0,0.159426272728822,0.199579371432817,0.766021480529467,0.635020748171649,0.649243880549111,0.842391534340376,0,0.156679895773023,0,1.52362600021443,0,0,0,1.03051603426729,0.307240764308458,0,0,0,0.278406173895242,0,1.89318974933188,0,2.81974010175699,0,0,0.849523652246594,0.111443384277478,0,0,0.296964680832639,0,0,0,0.333926115068718,0.494411622680279,0.422250816255987,0,0,0,0.613612095012929,0,0.311039587661807,0.359473404589307,0,1.02314474045374,0,0,0,0.969332746095218,0.278304294485554,0,0.520855522170466,0.0874599999961957,0,0.1137934482855,0,0,0.344743373241465,0.874813840149763,0.173624994933292,0,0.120596438625408,0,0,0.591095237907095,0,0,0.139423744278603,0,0.455768223388005,0,0,0.434589487688032,0,0.183195186803725,0,0,0.31396051279005,0.332423363800313,0,0,0.503464760927528,0.189753732724185,0,0,0,0.424059214301822,0.216388639742091,0,0,0,0.296521128680622,0.370691816839509,0.104421949505455,0.067401132980677,0,0,0,0.19566461893209,0.242780379534093,0,0,0.30607276163049,0.063186579628488,0.60129367765797,0.103688191397247,0,0,0,1.19472429772959,0.569219092059585,0.277349346026277,0,0,0.261177619741208,0,0.51595809741485,0.580537987734511,0.65780385377567,0.410577285266046,0,0,0,0.685209623233754,0,0.0633107959558787,0.391102765469606,0.0801588202515337,0,0,0,1.37443915399099,0,0.288109595976299,0,0,1.08723364858891,0.732219924186332,0.815985741090574,0,0,0,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0.223171457441873,0.134366944973453,0,0,0.157566364614447,0.329663433524666,0.404421263125109,0.0984274815147488,0.846733320657845,0,0,0.643012593860077,1.2378549293751,3.32352270423348,0.2249738915515,0,0.242998226632099,0,0,0.367182116944987,0.739202355635845,0.179287339332845,0,0,0,2.28841683889275,1.08599920350743,0,0.653174720218818,0,0.246277562248017,0.170388021785422,0.453248366080503,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0.197611631897944,0.243585196761792,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0.124192805882767,0.415045904808692,0.624902039810533,0,0.285465333544967,0,0,0,1.19403842309499,1.8697064787778,1.10961172300523,0.568209015825267,0.50313580350515,0,0.228840068396924,0.302461847526478,0.466311601748341,0.443565449968902,0.477890301491107,0.449803112163605,1.24210365501008,0.414706207840855,0.53168342911599,1.5652351854352,0.300515217994437,0.380805212168795,0.813741466409323,0.545545977607678,1.28892668450986,0,0,0.400027764663154,1.37358282073117,1.6837474438296,0,0,1.07220795687463,0.782982875895635,0.226705925512272,0.231522474323834,1.71315693154527,1.25362188757041,1.54400723580486,1.09642024789354,0,0.192914038270915,0.675769762612291,0,0.345430341731199,0.303859956177382,0,0.194860308839388,0.132864840313363,0,0,0.491545817507439,0,0.39997479170986,0,0,0,0.184105950251841,0.279759015438889,0,0,0.431299245586727,1.57265941855896,0,0.33946505990805,1.70059936081346,0.371807292777007,0.558644917973244,0.318004350653419,0,0,1.05802783107205,0.3062454773532,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0.687034029507179,0,0.183428598521679,0,0.762764190934334,0.690359926060101,0.994581110581374,0,1.61364054962816,0,0,0,0.147856086217045,0,0,0,0.126831620387814,0,0,0,0.527613733078862,0.383287282918786,0,0,0,0,0.532214220975833,0.115233987555779,0,0.0679697329768317,0.0657727735628491,0.118193840883968,0.778619813244484,0,0,0.280272163313789,0.913158720509496,0.215927591218621,0,0,0.158013611732727,0.23248285073625,2.08629926763095,0.801711364730253,0,0.51215543128185,0,0,0,0.426067023795788,0.423387050190929,0.22910686854405,1.24082554265728,1.91107787795487,0.447421727191169,0,0,0,0.102662806856247,1.1598144313382,0,0.233939463462106,0.198950775161368,0.356760272332706,0.11294608203896,0,0.150962843566674,0.0771741581079447,0.218559560503957,0,0,0.235676547101626,0.392616934229891,0,0,0.339854229375634,0.0939839179798536,0.128915775947154,0.599646935549574,0,0,0,0,0,0.143339583151451,1.10440093535229,0.203974470572744,0.436350690340377,0.5290268405154,0.371995018166751,0,0.432626562123789,0.126166424835079,0,0.506794004045748,0.101988829741982,0,0,0,0.0757786982182394,0,0,0,0,0.714193294391221,0,0.124149428591716,0.448527450322454,0.0636471582781649,0.202117188958219,0.653150243690884,0.684466602170562,0,0.0717222053926763,0,0.89543595472072,1.17400080465487,0,0,0,0.244482888365733,0.813792356631477,0,0,0 | |||
|short_description=p5@RFXANK | |||
}} |
Revision as of 22:20, 20 January 2014
Short description: | p5@RFXANK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RFXANK_5end |
Coexpression cluster: | NA |
Association with transcript: | 15bp_to_ENST00000545522_5end |
EntrezGene: | RFXANK |
HGNC: | 9987 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.01e-25 | 36 |
endothelial cell of vascular tree | 1.16e-22 | 24 |
meso-epithelial cell | 1.61e-22 | 45 |
lining cell | 6.16e-22 | 58 |
barrier cell | 6.16e-22 | 58 |
mesodermal cell | 1.16e-17 | 121 |
blood vessel endothelial cell | 2.39e-16 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.39e-16 | 18 |
embryonic cell | 2.07e-11 | 250 |
endothelial cell of artery | 5.04e-08 | 9 |
lymphangioblast | 6.14e-08 | 6 |
endothelial cell of lymphatic vessel | 6.14e-08 | 6 |
vascular lymphangioblast | 6.14e-08 | 6 |
aortic smooth muscle cell | 7.96e-07 | 10 |