FFCP PHASE1:Hg19::chr19:11072196..11072239,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:11072196..11072239,+ | |||
|id=chr19:11072196..11072239,+ | |||
|ontology_enrichment_celltype=CL:0000133!3.89e-08!59;CL:0000333!3.11e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0002322;5.07e-15;5!CL:0002321;5.86e-15;15!CL:0000333;2.75e-10;5!CL:0000148;2.50e-07;10!CL:0002262;2.90e-07;2!CL:1000398;2.90e-07;2!CL:0000147;3.94e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,6.20e-15,5;CL:0000333,1.40e-07,41;CL:0002262,2.69e-07,2;CL:1000398,2.69e-07,2;CL:0000148,4.63e-07,10;CL:0000541,4.63e-07,10;CL:0000147,8.99e-07,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;1.44e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,7.50e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!3.98e-11!94;UBERON:0001016!3.98e-11!94;UBERON:0005743!2.17e-09!86;UBERON:0001017!7.89e-09!82;UBERON:0002346!2.62e-08!90;UBERON:0003075!1.50e-07!86;UBERON:0007284!1.50e-07!86;UBERON:0001049!2.13e-07!57;UBERON:0005068!2.13e-07!57;UBERON:0006241!2.13e-07!57;UBERON:0007135!2.13e-07!57;UBERON:0000955!2.26e-07!69;UBERON:0006238!2.26e-07!69;UBERON:0002616!3.47e-07!59;UBERON:0000924!4.33e-07!173;UBERON:0006601!4.33e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;2.75e-10;5!UBERON:0002410;2.75e-10;5!UBERON:0001281;2.90e-07;2!UBERON:0003497;2.90e-07;2!UBERON:0003909;2.90e-07;2!UBERON:0003835;2.90e-07;2!UBERON:0002370;7.64e-07;2!UBERON:0005058;7.64e-07;2!UBERON:0009113;7.64e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.24e-10,5;UBERON:0002410,1.24e-10,5;UBERON:0001281,2.69e-07,2;UBERON:0003497,2.69e-07,2;UBERON:0003909,2.69e-07,2;UBERON:0003835,2.69e-07,2 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0.697801167972428,0.436882744260345,0,0.37129905888014,0,0.672325146451775,0.602694528023977,1.46062018077475,0.487932798790507,1.96993692922861,1.42800483870977,0.626909442956176,0.572471974262113,0.821246550437305,0.251085279189606,0.687720651731561,0.656804715599566,0.708397031823113,0,0,0,0,0,0,5.11283523829991,0.426507697462265,0.293600439334847,0,0.200544447470142,0,0.223915474239924,0,0,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,1.32171328579026,0.560508562981536,0.263384084775077,0,0.393010762749165,0,0.167186495390678,0,0,0,0.222820913770347,0,0,0,0.128091319725675,0,0.164437904603676,0,0,0,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.511450247374121,0,0,0.579386075843295,0,0,0.567208902984407,0.221729397462564,0.614843499851882,0.458426764241994,0,0,0,0.174129737299267,0.26591592103773,0,1.71598473234038,0,0.198762407366705,0,0,0,0.419499436209906,0.275118041940067,0.626984899610432,0,0,0,0,0,0.732186172644509,0.367663080345869,0,0.446498641420399,0.898117490504679,0.225222960966644,0,1.89853131913626,0.916008719652036,0,0,0,0,0.12663051166458,0.529636723252875,0.860509862246441,0.354668382198357,0.560677600142307,0,0,0.933633106199299,0.538842688278752,0.163461903113459,0.302714855289863,0,1.87457145467037,0,0,0.149448680551801,0.23486899728753,0.647491777472526,0.98315564691574,0,0.491337269247072,0.309977343527296,0,0.247266929278557,0,0.718618141816238,0.505008341862199,1.12606667884768,0,0.877955241761676,0,0.150238058906597,0,0.538168907066586,0.213557388818567,0.211931901159562,0.300091096084402,0.103052529238439,0,0.18611685633159,0.168776332241266,0.389748020644795,0.757301322732344,0.184099797284599,0.646584227275248,1.06502877754984,0.302256294682921,0.169560592310488,0,0,0,1.46368447355514,1.85541675650079,2.44007280025989,1.0366105501537,1.26160425437814,2.18986415445498,1.56449532329816,0,0,0,0.721879481669586,0.118306800039844,0.505754070234305,0,0,0,0,0,0,0.38474715694639,2.95262181849859,1.40241773803446,0.4115740113314,1.47008711385542,0,0,0,0.882926198829301,0.245976877086227,0.171567810298526,0,1.1240175325762,0.100528972411631,0.0925884451585296,0.977424915930974,0,0,0.695582429850461,0.117408694235822,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0.581267877027924,0,0.492663237895943,0.176096868026452,0.414656231081544,0.288239906833923,0,0.190493682876507,0.381988425558278,1.17217447210047,0,0.205654985406647,0.300343057843917,1.42913216315289,1.00917975910825,1.30788020649984,0.1466765716419,0.258543431515556,0,0,0.531876233169741,0,0.771622122786426,0,0.799266537048298,0.285955987316295,0,0,0,0,0,0.602878754119172,0,0.299918973546171,0,0,0,0.239624855491583,1.14861935834114,0,0.144781306667579,0.205476322550383,0.179060963239896,0.448340575974109,0,0,0,0.254094624222463,1.30139853857622,0,0.502548796003046,0,0,0,0,0.858840442033979,0.500170521059677,0,0.415941723061614,0.178428988797162,0.315404830067869,0.234282829985426,0.601892199455438,0,0,0,0.368738337083406,0.260650843404249,1.17480694477644,0.686286847621712,0,0.215714200818617,0,0.303127571446259,0,0.604780586659361,0.248107807818777,0,0.561320188866147,0.128139149255701,0,0.160853921143607,0,0.308419387605311,0,0.164254312027618,0,0.581051892299796,0.362578348774867,0,0,0.34444334449382,0.182091168006717,0.131124414959424,0,0,0,1.46139224653261,0,1.13733384070897,0.850468526382578,0,0,0.270946437543853,0,0,0,0.447749509444357,0,0,1.02580050046556,0.656029291399411,0,0,0.366277859273374,0.165018999841176,0.574265537996172,0,0,0.193341436584244,0.154048617114644,0.15350367472613,0.275673144969061,0.429680979473094,0.580066775656914,0.426133137080504,0.801288320820636,0,0,0,0.2023155617111,0,0.62962469366128,0,0,0,0,0.18532421910392,0.143124886741991,1.86079184679834,0.316379424718726,0,0,0.42793898803392,0,0,0.359744915166629,0.54907405947211,0,0.404364963146632,0,0.421258456238981,0,0,0,0,0.282810863907425,0,0,1.32687795048244,0,0.578775534266688,0,0.608731130888112,0.30982349809975,0.281695602532241,0,0.0982490410131212,0.35667105148125,0.354761064070598,0.211107635297664,0.329294892959902,0.75894634753143,1.04980416073495,0,0,0,0.0941438007767792,0.43050537267123,0,0.443430153536676,0,0,0.764637207142375,0,0,0,0,0,0,1.1750647824022,0,0,1.11481905075431,0.721346064882224,0.569134746787313,0.956557636372934,0.199579371432817,0,0.211673582723883,0.649243880549111,0.280797178113459,1.82587743226554,0.313359791546046,0,0.338583555603207,0.321176150207399,0.201799707191048,0,0,0,0.447352215784832,0.333698283423817,0.586164286206121,1.11362469558097,3.69262196843137,0.811367035427949,0.33307196799782,0,0,0,0,0.222886768554957,0,0,0,0,1.9882952955326,0.422008249231538,0.111308705022906,0.16480387422676,4.01138275443188,0.19924798825107,0.552567831062295,0.503865495708552,0.511343412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| |||
|short_description=p@chr19:11072196..11072239,+ | |||
}} |
Revision as of 21:21, 20 January 2014
Short description: | p@chr19:11072196..11072239, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:11072196..11072239, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 6.20e-15 | 5 |
migratory neural crest cell | 1.40e-07 | 41 |
endothelial cell of sinusoid | 2.69e-07 | 2 |
endothelial cell of hepatic sinusoid | 2.69e-07 | 2 |
melanocyte | 4.63e-07 | 10 |
melanoblast | 4.63e-07 | 10 |
pigment cell | 8.99e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.24e-10 | 5 |
autonomic nervous system | 1.24e-10 | 5 |
hepatic sinusoid | 2.69e-07 | 2 |
abdomen blood vessel | 2.69e-07 | 2 |
sinusoid | 2.69e-07 | 2 |
abdominal segment blood vessel | 2.69e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 7.50e-09 | 6 |